RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 FAM90A26D6RGX4 464 aa10.28□□□□□ -0.76
VMP1-202ENST00000585847 J3QR06 171 aa10.28□□□□□ -0.76
VMP1-202ENST00000585847 MMP23AO75900 390 aa10.28□□□□□ -0.76
VMP1-202ENST00000585847 HPRT1P00492 218 aa10.28□□□□□ -0.76
VMP1-202ENST00000585847 APOA2P02652 100 aa10.28□□□□□ -0.76
VMP1-202ENST00000585847 RLN2P04090 185 aa10.28□□□□□ -0.76
VMP1-202ENST00000585847 SAA2P0DJI9 122 aaPredicted RBP10.28□□□□□ -0.76
VMP1-202ENST00000585847 IGHV3-43DP0DP04 118 aa10.28□□□□□ -0.76
VMP1-202ENST00000585847 SLC25A4P12235 298 aa10.28□□□□□ -0.76
VMP1-202ENST00000585847 OMGP23515 440 aa10.28□□□□□ -0.76
VMP1-202ENST00000585847 MC5RP33032 325 aa10.28□□□□□ -0.76
VMP1-202ENST00000585847 PRB3Q04118 309 aaPredicted RBP10.28□□□□□ -0.76
VMP1-202ENST00000585847 IAH1Q2TAA2 248 aaPredicted RBP10.28□□□□□ -0.76
VMP1-202ENST00000585847 NMSQ5H8A3 153 aa10.28□□□□□ -0.76
VMP1-202ENST00000585847 HCP5Q6MZN7 132 aa10.28□□□□□ -0.76
VMP1-202ENST00000585847 SLC35G3Q8N808 338 aa10.28□□□□□ -0.76
VMP1-202ENST00000585847 OR11H6Q8NGC7 330 aa10.28□□□□□ -0.76
VMP1-202ENST00000585847 UBALD1Q8TB05 177 aa10.28□□□□□ -0.76
VMP1-202ENST00000585847 THAP6Q8TBB0 222 aa10.28□□□□□ -0.76
VMP1-202ENST00000585847 FYTTD1Q96QD9 318 aaKnown RBP10.28□□□□□ -0.76
VMP1-202ENST00000585847 PARP12Q9H0J9 701 aaKnown RBP10.28□□□□□ -0.76
VMP1-202ENST00000585847 MMP24Q9Y5R2 645 aa10.28□□□□□ -0.76
VMP1-202ENST00000585847 IGHV2-26A0A0B4J1V2 119 aa10.27□□□□□ -0.77
VMP1-202ENST00000585847 A8MV72 311 aaPredicted RBP10.27□□□□□ -0.77
VMP1-202ENST00000585847 M0R1X1 148 aa10.27□□□□□ -0.77
VMP1-202ENST00000585847 FSHBP01225 129 aa10.27□□□□□ -0.77
VMP1-202ENST00000585847 PSMB6P28072 239 aa10.27□□□□□ -0.77
VMP1-202ENST00000585847 AKR1C2P52895 323 aa10.27□□□□□ -0.77
VMP1-202ENST00000585847 ERVK-16P61578 105 aa10.27□□□□□ -0.77
VMP1-202ENST00000585847 LTC4SQ16873 150 aa10.27□□□□□ -0.77
VMP1-202ENST00000585847 HLA-DRB5Q30154 266 aa10.27□□□□□ -0.77
VMP1-202ENST00000585847 KLF17Q5JT82 389 aaPredicted RBP10.27□□□□□ -0.77
VMP1-202ENST00000585847 UTF1Q5T230 341 aa10.27□□□□□ -0.77
VMP1-202ENST00000585847 MINOS1Q5TGZ0 78 aa10.27□□□□□ -0.77
VMP1-202ENST00000585847 GGNBP1Q5YKI7 109 aa10.27□□□□□ -0.77
VMP1-202ENST00000585847 CCDC144NLQ6NUI1 221 aa10.27□□□□□ -0.77
VMP1-202ENST00000585847 SELENOHQ8IZQ5 122 aaKnown RBP10.27□□□□□ -0.77
VMP1-202ENST00000585847 SPAG16Q8N0X2 631 aa10.27□□□□□ -0.77
VMP1-202ENST00000585847 LYG1Q8N1E2 194 aa10.27□□□□□ -0.77
VMP1-202ENST00000585847 ABHD12Q8N2K0 398 aa10.27□□□□□ -0.77
VMP1-202ENST00000585847 RNASE11Q8TAA1 199 aaKnown RBP10.27□□□□□ -0.77
VMP1-202ENST00000585847 ONECUT1Q9UBC0 465 aa10.27□□□□□ -0.77
VMP1-202ENST00000585847 MINOS1-NBL1R4GNA1 71 aa10.27□□□□□ -0.77
VMP1-202ENST00000585847 SVEP1Q4LDE5 3571 aa10.26□□□□□ -0.77
VMP1-202ENST00000585847 FAM25EA8MYX2 175 aa10.26□□□□□ -0.77
VMP1-202ENST00000585847 J3QLI3 93 aa10.26□□□□□ -0.77
VMP1-202ENST00000585847 HRASP01112 189 aa10.26□□□□□ -0.77
VMP1-202ENST00000585847 IGLV1-47P01700 117 aa10.26□□□□□ -0.77
VMP1-202ENST00000585847 PVALBP20472 110 aaPredicted RBP10.26□□□□□ -0.77
VMP1-202ENST00000585847 EPHA1P21709 976 aa10.26□□□□□ -0.77
VMP1-202ENST00000585847 ZNF345Q14585 488 aa10.26□□□□□ -0.77
VMP1-202ENST00000585847 POU2AF1Q16633 256 aa10.26□□□□□ -0.77
VMP1-202ENST00000585847 IL17RELQ6ZVW7 336 aa10.26□□□□□ -0.77
VMP1-202ENST00000585847 PDPNQ86YL7 162 aa10.26□□□□□ -0.77
VMP1-202ENST00000585847 ZBTB8BQ8NAP8 495 aaPredicted RBP10.26□□□□□ -0.77
VMP1-202ENST00000585847 VSTM2AQ8TAG5 236 aa10.26□□□□□ -0.77
VMP1-202ENST00000585847 OSR1Q8TAX0 266 aaPredicted RBP10.26□□□□□ -0.77
VMP1-202ENST00000585847 PPP1R1CQ8WVI7 109 aa10.26□□□□□ -0.77
VMP1-202ENST00000585847 TMEM158Q8WZ71 300 aa10.26□□□□□ -0.77
VMP1-202ENST00000585847 DDB2Q92466 427 aa10.26□□□□□ -0.77
VMP1-202ENST00000585847 C7orf69Q9H7B7 122 aa10.26□□□□□ -0.77
VMP1-202ENST00000585847 TMEM160Q9NX00 188 aa10.26□□□□□ -0.77
VMP1-202ENST00000585847 TBL2Q9Y4P3 447 aaKnown RBP10.26□□□□□ -0.77
VMP1-202ENST00000585847 AUP1Q9Y679 476 aa10.26□□□□□ -0.77
VMP1-202ENST00000585847 C13orf42A0A1B0GVH6 325 aa10.25□□□□□ -0.77
VMP1-202ENST00000585847 BOLA2-SMG1P6H3BVE0 249 aa10.25□□□□□ -0.77
VMP1-202ENST00000585847 ST8SIA3O43173 380 aa10.25□□□□□ -0.77
VMP1-202ENST00000585847 TNFSF12O43508 249 aa10.25□□□□□ -0.77
VMP1-202ENST00000585847 HOXB5P09067 269 aa10.25□□□□□ -0.77
VMP1-202ENST00000585847 LYL1P12980 280 aa10.25□□□□□ -0.77
VMP1-202ENST00000585847 NQO2P16083 231 aa10.25□□□□□ -0.77
VMP1-202ENST00000585847 NUP62P37198 522 aaPredicted RBP10.25□□□□□ -0.77
VMP1-202ENST00000585847 ZNF134P52741 427 aa10.25□□□□□ -0.77
VMP1-202ENST00000585847 ZNF816Q0VGE8 651 aaPredicted RBP10.25□□□□□ -0.77
VMP1-202ENST00000585847 KLRD1Q13241 179 aa10.25□□□□□ -0.77
VMP1-202ENST00000585847 IL15RAQ13261 267 aa10.25□□□□□ -0.77
VMP1-202ENST00000585847 SP6Q3SY56 376 aa10.25□□□□□ -0.77
VMP1-202ENST00000585847 AARDQ4LEZ3 155 aa10.25□□□□□ -0.77
VMP1-202ENST00000585847 FAM120AOSQ5T036 256 aa10.25□□□□□ -0.77
VMP1-202ENST00000585847 FAM53AQ6NSI3 398 aaPredicted RBP10.25□□□□□ -0.77
VMP1-202ENST00000585847 C11orf87Q6NUJ2 197 aa10.25□□□□□ -0.77
VMP1-202ENST00000585847 PRSS54Q6PEW0 395 aa10.25□□□□□ -0.77
VMP1-202ENST00000585847 VMO1Q7Z5L0 202 aa10.25□□□□□ -0.77
VMP1-202ENST00000585847 TGIF2LXQ8IUE1 241 aa10.25□□□□□ -0.77
VMP1-202ENST00000585847 OR8H3Q8N146 312 aa10.25□□□□□ -0.77
VMP1-202ENST00000585847 TEX29Q8N6K0 151 aa10.25□□□□□ -0.77
VMP1-202ENST00000585847 OR5AN1Q8NGI8 311 aa10.25□□□□□ -0.77
VMP1-202ENST00000585847 ST6GALNAC6Q969X2 333 aa10.25□□□□□ -0.77
VMP1-202ENST00000585847 RNF5Q99942 180 aa10.25□□□□□ -0.77
VMP1-202ENST00000585847 ZNF251Q9BRH9 671 aa10.25□□□□□ -0.77
VMP1-202ENST00000585847 CHIAQ9BZP6 476 aa10.25□□□□□ -0.77
VMP1-202ENST00000585847 SIRT7Q9NRC8 400 aa10.25□□□□□ -0.77
VMP1-202ENST00000585847 RNF150Q9ULK6 438 aa10.25□□□□□ -0.77
VMP1-202ENST00000585847 SONP18583 2426 aaKnown RBP10.25□□□□□ -0.77
VMP1-202ENST00000585847 LEUTXA8MZ59 168 aa10.24□□□□□ -0.77
VMP1-202ENST00000585847 RNASEK-C17orf49H0YIS7 233 aa10.24□□□□□ -0.77
VMP1-202ENST00000585847 MED6O75586 246 aa10.24□□□□□ -0.77
VMP1-202ENST00000585847 ADAP1O75689 374 aa10.24□□□□□ -0.77
VMP1-202ENST00000585847 TOX4O94842 621 aa10.24□□□□□ -0.77
VMP1-202ENST00000585847 OR2F2O95006 317 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms