RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 IGFL3Q6UXB1 125 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 MRGPRGQ86SM5 289 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 NECAP1Q8NC96 275 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 ZBTB34Q8NCN2 500 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 CLRN3Q8NCR9 226 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 CABLES2Q9BTV7 478 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 QTRT1Q9BXR0 403 aaKnown RBP10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 SLC35B3Q9H1N7 401 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 ARV1Q9H2C2 271 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 MS4A5Q9H3V2 200 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 MED9Q9NWA0 146 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 C17orf112F2Z3M2 114 aa10.38□□□□□ -0.75
SMARCA4-208ENST00000585799 S100A9P06702 114 aaKnown RBP10.38□□□□□ -0.75
SMARCA4-208ENST00000585799 SNRPCP09234 159 aaKnown RBP10.38□□□□□ -0.75
SMARCA4-208ENST00000585799 DANCRP0C864 163 aa10.38□□□□□ -0.75
SMARCA4-208ENST00000585799 CD200P41217 278 aa10.38□□□□□ -0.75
SMARCA4-208ENST00000585799 RAB7AP51149 207 aa10.38□□□□□ -0.75
SMARCA4-208ENST00000585799 TAS2R30P59541 319 aa10.38□□□□□ -0.75
SMARCA4-208ENST00000585799 LDLRAD3Q86YD5 345 aa10.38□□□□□ -0.75
SMARCA4-208ENST00000585799 ONECUT1Q9UBC0 465 aa10.38□□□□□ -0.75
SMARCA4-208ENST00000585799 ARHGAP21Q5T5U3 1957 aa10.38□□□□□ -0.75
SMARCA4-208ENST00000585799 DMDP11532 3685 aa10.38□□□□□ -0.75
SMARCA4-208ENST00000585799 PCSK5Q92824 1860 aa10.38□□□□□ -0.75
SMARCA4-208ENST00000585799 ZNF727A8MUV8 499 aa10.38□□□□□ -0.75
SMARCA4-208ENST00000585799 MBNL2Q5VZF2 373 aaKnown RBP10.38□□□□□ -0.75
SMARCA4-208ENST00000585799 FAM24BQ8N5W8 94 aa10.38□□□□□ -0.75
SMARCA4-208ENST00000585799 PLEKHA3Q9HB20 300 aa10.38□□□□□ -0.75
SMARCA4-208ENST00000585799 ZDHHC8Q9ULC8 765 aa10.38□□□□□ -0.75
SMARCA4-208ENST00000585799 DSPP15924 2871 aaKnown RBP10.38□□□□□ -0.75
SMARCA4-208ENST00000585799 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.38□□□□□ -0.75
SMARCA4-208ENST00000585799 SCAF4O95104 1147 aaKnown RBP10.38□□□□□ -0.75
SMARCA4-208ENST00000585799 IGHV3-48P01763 117 aa10.38□□□□□ -0.75
SMARCA4-208ENST00000585799 CCL20P78556 96 aa10.38□□□□□ -0.75
SMARCA4-208ENST00000585799 C22orf34Q6ZV56 151 aa10.38□□□□□ -0.75
SMARCA4-208ENST00000585799 C11orf53Q8IXP5 236 aa10.38□□□□□ -0.75
SMARCA4-208ENST00000585799 LURAP1Q96LR2 239 aa10.38□□□□□ -0.75
SMARCA4-208ENST00000585799 RPRMQ9NS64 109 aa10.38□□□□□ -0.75
SMARCA4-208ENST00000585799 C17orf100A8MU93 164 aa10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 SLC31A2O15432 143 aa10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 FAM157CP0CG43 387 aa10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 DEFA4P12838 97 aa10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 ZNF273Q14593 569 aa10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 C1QTNF12Q5T7M4 302 aa10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 C1orf174Q8IYL3 243 aa10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 OR10G4Q8NGN3 311 aa10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 OR10G9Q8NGN4 311 aa10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 OR10G7Q8NGN6 311 aa10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 GAL3ST2Q9H3Q3 398 aa10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 A0A1W2PPE2 198 aa10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 LINC00473A8K010 186 aa10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 TRIM77I1YAP6 450 aa10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 CYB5BO43169 146 aa10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 OR2C1O95371 312 aa10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 RBMS3Q6XE24 437 aaKnown RBP10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 ZNF429Q86V71 674 aa10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 IL22RA2Q969J5 263 aa10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 TMEM147Q9BVK8 224 aa10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 TMEM140Q9NV12 185 aa10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 FGF16O43320 207 aa10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 LY6HO94772 140 aa10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 HRASP01112 189 aa10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 CGAP01215 116 aa10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 PSMB3P49720 205 aa10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 ZNF585BQ52M93 769 aa10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 Q8NFD4 153 aa10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 LSM10Q969L4 123 aaKnown RBP10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 TMEM204Q9BSN7 226 aa10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 ACTR3CQ9C0K3 210 aaPredicted RBP10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 IL19Q9UHD0 177 aa10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 CREBBPQ92793 2442 aa10.37□□□□□ -0.75
SMARCA4-208ENST00000585799 C7orf77A4D0Y5 90 aa10.36□□□□□ -0.75
SMARCA4-208ENST00000585799 K7N7A8 449 aa10.36□□□□□ -0.75
SMARCA4-208ENST00000585799 RAB29O14966 203 aa10.36□□□□□ -0.75
SMARCA4-208ENST00000585799 CEACAM4O75871 244 aa10.36□□□□□ -0.75
SMARCA4-208ENST00000585799 IL15RAQ13261 267 aa10.36□□□□□ -0.75
SMARCA4-208ENST00000585799 MORN2Q502X0 79 aa10.36□□□□□ -0.75
SMARCA4-208ENST00000585799 CYB561D1Q8N8Q1 229 aa10.36□□□□□ -0.75
SMARCA4-208ENST00000585799 HARBI1Q96MB7 349 aa10.36□□□□□ -0.75
SMARCA4-208ENST00000585799 SEC11CQ9BY50 192 aa10.36□□□□□ -0.75
SMARCA4-208ENST00000585799 AURKAIP1Q9NWT8 199 aaPredicted RBP10.36□□□□□ -0.75
SMARCA4-208ENST00000585799 ZFYVE26Q68DK2 2539 aa10.36□□□□□ -0.75
SMARCA4-208ENST00000585799 BOD1L1Q8NFC6 3051 aa10.36□□□□□ -0.75
SMARCA4-208ENST00000585799 HPRT1P00492 218 aa10.36□□□□□ -0.75
SMARCA4-208ENST00000585799 IGKV1-39P01597 117 aa10.36□□□□□ -0.75
SMARCA4-208ENST00000585799 IGLV1-44P01699 117 aa10.36□□□□□ -0.75
SMARCA4-208ENST00000585799 IGKV1D-39P04432 117 aa10.36□□□□□ -0.75
SMARCA4-208ENST00000585799 SPP1P10451 314 aa10.36□□□□□ -0.75
SMARCA4-208ENST00000585799 ZNF66Q6ZN08 573 aa10.36□□□□□ -0.75
SMARCA4-208ENST00000585799 SMIM7Q9BQ49 75 aa10.36□□□□□ -0.75
SMARCA4-208ENST00000585799 GINS3Q9BRX5 216 aa10.36□□□□□ -0.75
SMARCA4-208ENST00000585799 TNRC6BQ9UPQ9 1833 aaKnown RBP10.36□□□□□ -0.75
SMARCA4-208ENST00000585799 IGHV3-21A0A0B4J1V1 117 aa10.36□□□□□ -0.75
SMARCA4-208ENST00000585799 SMIM8Q96KF7 97 aa10.36□□□□□ -0.75
SMARCA4-208ENST00000585799 ZNF714Q96N38 554 aa10.36□□□□□ -0.75
SMARCA4-208ENST00000585799 JPT1Q9UK76 154 aa10.36□□□□□ -0.75
SMARCA4-208ENST00000585799 A0A1W2PPH5 198 aa10.35□□□□□ -0.75
SMARCA4-208ENST00000585799 PLAUP00749 431 aa10.35□□□□□ -0.75
SMARCA4-208ENST00000585799 TAF15Q92804 592 aaKnown RBP eCLIP10.35□□□□□ -0.75
SMARCA4-208ENST00000585799 IDI2-AS1Q9NZ38 188 aa10.35□□□□□ -0.75
SMARCA4-208ENST00000585799 DLX1P56177 255 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms