RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 ECI1P42126 302 aa8.85□□□□□ -0.99
TOP3A-216ENST00000583804 SRSF4Q08170 494 aaKnown RBP8.85□□□□□ -0.99
TOP3A-216ENST00000583804 DHRS2Q13268 280 aa8.85□□□□□ -0.99
TOP3A-216ENST00000583804 EXOSC2Q13868 293 aaKnown RBP8.85□□□□□ -0.99
TOP3A-216ENST00000583804 OPCMLQ14982 345 aa8.85□□□□□ -0.99
TOP3A-216ENST00000583804 C9orf139Q6ZV77 190 aa8.85□□□□□ -0.99
TOP3A-216ENST00000583804 KCTD9Q7L273 389 aa8.85□□□□□ -0.99
TOP3A-216ENST00000583804 ODF3L1Q8IXM7 274 aa8.85□□□□□ -0.99
TOP3A-216ENST00000583804 ZNF645Q8N7E2 425 aa8.85□□□□□ -0.99
TOP3A-216ENST00000583804 TCTEX1D2Q8WW35 142 aa8.85□□□□□ -0.99
TOP3A-216ENST00000583804 RTN4IP1Q8WWV3 396 aaPredicted RBP8.85□□□□□ -0.99
TOP3A-216ENST00000583804 SCGB3A2Q96PL1 93 aa8.85□□□□□ -0.99
TOP3A-216ENST00000583804 S1PR3Q99500 378 aa8.85□□□□□ -0.99
TOP3A-216ENST00000583804 NAA60Q9H7X0 242 aa8.85□□□□□ -0.99
TOP3A-216ENST00000583804 UBQLN2Q9UHD9 624 aa8.85□□□□□ -0.99
TOP3A-216ENST00000583804 RPS10-NUDT3A0A1W2PQS6 291 aa8.84□□□□□ -0.99
TOP3A-216ENST00000583804 C9orf170A2RU37 121 aa8.84□□□□□ -0.99
TOP3A-216ENST00000583804 CRYM-AS1A6NIL9 109 aa8.84□□□□□ -0.99
TOP3A-216ENST00000583804 CCSO14618 274 aa8.84□□□□□ -0.99
TOP3A-216ENST00000583804 PGLYRP1O75594 196 aaPredicted RBP8.84□□□□□ -0.99
TOP3A-216ENST00000583804 GAPDHP04406 335 aaKnown RBP8.84□□□□□ -0.99
TOP3A-216ENST00000583804 RPA2P15927 270 aa8.84□□□□□ -0.99
TOP3A-216ENST00000583804 UCP3P55916 312 aa8.84□□□□□ -0.99
TOP3A-216ENST00000583804 TAS2R31P59538 309 aa8.84□□□□□ -0.99
TOP3A-216ENST00000583804 RPL30P62888 115 aaKnown RBP8.84□□□□□ -0.99
TOP3A-216ENST00000583804 SUPT4H1P63272 117 aaKnown RBP8.84□□□□□ -0.99
TOP3A-216ENST00000583804 SURF2Q15527 256 aaPredicted RBP8.84□□□□□ -0.99
TOP3A-216ENST00000583804 LPCAT3Q6P1A2 487 aa8.84□□□□□ -0.99
TOP3A-216ENST00000583804 RBMS3Q6XE24 437 aaKnown RBP8.84□□□□□ -0.99
TOP3A-216ENST00000583804 MOB3BQ86TA1 216 aa8.84□□□□□ -0.99
TOP3A-216ENST00000583804 TGIF2LXQ8IUE1 241 aa8.84□□□□□ -0.99
TOP3A-216ENST00000583804 SGPP2Q8IWX5 399 aa8.84□□□□□ -0.99
TOP3A-216ENST00000583804 DYNAPQ8N1N2 210 aa8.84□□□□□ -0.99
TOP3A-216ENST00000583804 CCDC71LQ8N9Z2 235 aa8.84□□□□□ -0.99
TOP3A-216ENST00000583804 AJUBAQ96IF1 538 aa8.84□□□□□ -0.99
TOP3A-216ENST00000583804 TP53RKQ96S44 253 aa8.84□□□□□ -0.99
TOP3A-216ENST00000583804 MRPL20Q9BYC9 149 aaKnown RBP8.84□□□□□ -0.99
TOP3A-216ENST00000583804 MTORP42345 2549 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 IGHV3-72A0A0B4J1Y9 119 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 OOSP1A8MZH6 123 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 L7N2F9 121 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 MPPED1O15442 326 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 SFT2D2O95562 160 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 FAM157CP0CG43 387 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 HLA-GP17693 338 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 CXCL2P19875 107 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 RAB13P51153 203 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 ARHGDIBP52566 201 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 ZNF137PP52743 207 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 ZNF816Q0VGE8 651 aaPredicted RBP8.83□□□□□ -1
TOP3A-216ENST00000583804 ANKRD55Q3KP44 614 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 CCDC144NLQ6NUI1 221 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 ZNF833PQ6ZTB9 187 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 LYG2Q86SG7 212 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 CMTM1Q8IZ96 169 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 C12orf45Q8N5I9 185 aaPredicted RBP8.83□□□□□ -1
TOP3A-216ENST00000583804 SIGLECL1Q8N7X8 197 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 FAM216AQ8WUB2 273 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 ST6GALNAC6Q969X2 333 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 ZNF48Q96MX3 618 aaPredicted RBP8.83□□□□□ -1
TOP3A-216ENST00000583804 CHIAQ9BZP6 476 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 MEGF9Q9H1U4 602 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 NAV3Q8IVL0 2385 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 ANK3Q12955 4377 aaKnown RBP8.83□□□□□ -1
TOP3A-216ENST00000583804 IGHV1-3A0A0C4DH29 117 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 C3orf85A0A1B0GTC6 90 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 LINC00473A8K010 186 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 GOSR2O14653 212 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 PROP1O75360 226 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 SIX6O95475 246 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 IFNA2P01563 188 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 S100GP29377 79 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 BRS3P32247 399 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 H2BFSP57053 126 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 C2orf68Q2NKX9 166 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 FAM219AQ8IW50 185 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 BVESQ8NE79 360 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 SSX3Q99909 188 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 ZNF251Q9BRH9 671 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 TNFRSF19Q9NS68 423 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 GAB2Q9UQC2 676 aa8.83□□□□□ -1
TOP3A-216ENST00000583804 A0A1W2PPI3 338 aa8.82□□□□□ -1
TOP3A-216ENST00000583804 FAM25EA8MYX2 175 aa8.82□□□□□ -1
TOP3A-216ENST00000583804 TIMM23O14925 209 aa8.82□□□□□ -1
TOP3A-216ENST00000583804 TXNL1O43396 289 aa8.82□□□□□ -1
TOP3A-216ENST00000583804 RAMP3O60896 148 aa8.82□□□□□ -1
TOP3A-216ENST00000583804 FCGR3BO75015 233 aa8.82□□□□□ -1
TOP3A-216ENST00000583804 B3GALNT1O75752 331 aa8.82□□□□□ -1
TOP3A-216ENST00000583804 FN1P02751 2386 aaKnown RBP8.82□□□□□ -1
TOP3A-216ENST00000583804 HOXB5P09067 269 aa8.82□□□□□ -1
TOP3A-216ENST00000583804 CD24P25063 80 aa8.82□□□□□ -1
TOP3A-216ENST00000583804 S100A11P31949 105 aa8.82□□□□□ -1
TOP3A-216ENST00000583804 LRRC75BQ2VPJ9 315 aa8.82□□□□□ -1
TOP3A-216ENST00000583804 TMEM128Q5BJH2 165 aa8.82□□□□□ -1
TOP3A-216ENST00000583804 FAM71F2Q6NXP2 309 aa8.82□□□□□ -1
TOP3A-216ENST00000583804 Q6YL49 198 aa8.82□□□□□ -1
TOP3A-216ENST00000583804 OR8H3Q8N146 312 aa8.82□□□□□ -1
TOP3A-216ENST00000583804 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.82□□□□□ -1
TOP3A-216ENST00000583804 OR5M8Q8NGP6 311 aa8.82□□□□□ -1
TOP3A-216ENST00000583804 LHFPL5Q8TAF8 219 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms