RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	SCO1	O75880	301 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	RLN1	P04808	185 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	ISG15	P05161	165 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	FAM106CP	P0CH98	169 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	AKAIN1	P0CW23	69 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	NDUFB7	P17568	137 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	HTR1D	P28221	377 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	HTR2C	P28335	458 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	CRABP1	P29762	137 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	CDA	P32320	146 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	PRSS3	P35030	304 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	RAB9A	P51151	201 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	ZNF133	P52736	654 aa	Predicted RBP	3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	AP2S1	P53680	142 aa	Predicted RBP	3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	RAP2B	P61225	183 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	UNC119	Q13432	240 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	HIST3H3	Q16695	136 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	KRTAP6-3	Q3LI67	103 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	SLC22A6	Q4U2R8	563 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	GLT8D1	Q68CQ7	371 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	TMEM200B	Q69YZ2	307 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	SIGIRR	Q6IA17	410 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	STEAP1B	Q6NZ63	245 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	ZNF529	Q6P280	563 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	ASCL4	Q6XD76	172 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772		Q6ZRN7	208 aa	Predicted RBP	3.5	□□□□□ -1.85
MSI2-216	ENST00000582772		Q6ZSA8	131 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	TMUB2	Q71RG4	321 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	SLC16A13	Q7RTY0	426 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	COMMD7	Q86VX2	200 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	OR8H3	Q8N146	312 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	TMEM229B	Q8NBD8	167 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	OR2AK2	Q8NG84	335 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	OR52N4	Q8NGI2	321 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	OR6M1	Q8NGM8	313 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	OR13C8	Q8NGS7	320 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	OR8S1	Q8NH09	359 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	AKR7L	Q8NHP1	331 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	AQP3	Q92482	292 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	SLAMF6	Q96DU3	332 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	RNF125	Q96EQ8	232 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	RARRES2	Q99969	163 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	GINS4	Q9BRT9	223 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	NICN1	Q9BSH3	213 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	OR2H1	Q9GZK4	316 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	PNRC2	Q9NPJ4	139 aa	Known RBP	3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	DIABLO	Q9NR28	239 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	CENPM	Q9NSP4	180 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	LIN7C	Q9NUP9	197 aa	Known RBP	3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	C1orf123	Q9NWV4	160 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	UBQLN2	Q9UHD9	624 aa		3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	ZNF230	Q9UIE0	474 aa	Predicted RBP	3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	TMA7	Q9Y2S6	64 aa	Known RBP	3.5	□□□□□ -1.85
MSI2-216	ENST00000582772	FXYD6-FXYD2	A0A087WZ82	144 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	TMEM269	A0A1B0GVZ9	245 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772		A0A1W2PPL8	197 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	ZNF726	A6NNF4	738 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	TMEM14DP	A8MWL7	114 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772		L7N2F9	121 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	SULT1C2	O00338	296 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	B3GALNT1	O75752	331 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	RAB3D	O95716	219 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	CRYZL1	O95825	349 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	IFNA7	P01567	189 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	ACAA1	P09110	424 aa	Predicted RBP	3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	H2BFM	P0C1H6	154 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	OR4E1	P0C645	316 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	RAB6A	P20340	208 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	FUT3	P21217	361 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	ZBTB25	P24278	435 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	LAP3	P28838	519 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	HSD11B1	P28845	292 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	BDKRB2	P30411	391 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	ADM	P35318	185 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	DAP3	P51398	398 aa	Known RBP	3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	MRPS34	P82930	218 aa	Known RBP	3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	SSBP1	Q04837	148 aa	Known RBP	3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	KLF5	Q13887	457 aa	Predicted RBP	3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	KCNMB1	Q16558	191 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	CD300E	Q496F6	205 aa	Predicted RBP	3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	CDNF	Q49AH0	187 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	NHLRC3	Q5JS37	347 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	TMEM244	Q5VVB8	128 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	DNM1P34	Q6PK57	102 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	DEGS2	Q6QHC5	323 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	C5orf46	Q6UWT4	87 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	ZNF826P	Q6ZT77	177 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	TRAPPC6B	Q86SZ2	158 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	SLC38A6	Q8IZM9	456 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	LRRC18	Q8N456	261 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	JAGN1	Q8N5M9	183 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772		Q8NAQ8	132 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	NOXO1	Q8NFA2	376 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	OR1M1	Q8NGA1	313 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	OR6X1	Q8NH79	312 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	C15orf40	Q8WUR7	153 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	NUDCD2	Q8WVJ2	157 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	THRSP	Q92748	146 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	CXorf58	Q96LI9	332 aa		3.49	□□□□□ -1.85
MSI2-216	ENST00000582772	SPACA5	Q96QH8	159 aa		3.49	□□□□□ -1.85

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms