RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 LY6EQ16553 131 aa12.73□□□□□ -0.37
CSNK1D-212ENST00000580061 TMEM128Q5BJH2 165 aa12.73□□□□□ -0.37
CSNK1D-212ENST00000580061 DHRS7BQ6IAN0 325 aaPredicted RBP12.73□□□□□ -0.37
CSNK1D-212ENST00000580061 CCBE1Q6UXH8 406 aaPredicted RBP12.73□□□□□ -0.37
CSNK1D-212ENST00000580061 SGPP2Q8IWX5 399 aa12.73□□□□□ -0.37
CSNK1D-212ENST00000580061 TMEM86BQ8N661 226 aa12.73□□□□□ -0.37
CSNK1D-212ENST00000580061 Q8N6K4 173 aa12.73□□□□□ -0.37
CSNK1D-212ENST00000580061 OR4C13Q8NGP0 309 aa12.73□□□□□ -0.37
CSNK1D-212ENST00000580061 ZFAND2BQ8WV99 257 aa12.73□□□□□ -0.37
CSNK1D-212ENST00000580061 RITA1Q96K30 269 aa12.73□□□□□ -0.37
CSNK1D-212ENST00000580061 TP53RKQ96S44 253 aa12.73□□□□□ -0.37
CSNK1D-212ENST00000580061 ESM1Q9NQ30 184 aa12.73□□□□□ -0.37
CSNK1D-212ENST00000580061 POMT1Q9Y6A1 747 aa12.73□□□□□ -0.37
CSNK1D-212ENST00000580061 A6NDX4 124 aa12.72□□□□□ -0.37
CSNK1D-212ENST00000580061 BTBD17A6NE02 478 aa12.72□□□□□ -0.37
CSNK1D-212ENST00000580061 H0Y980 276 aa12.72□□□□□ -0.37
CSNK1D-212ENST00000580061 CRYZL1O95825 349 aa12.72□□□□□ -0.37
CSNK1D-212ENST00000580061 TMEM11P17152 192 aa12.72□□□□□ -0.37
CSNK1D-212ENST00000580061 ANXA7P20073 488 aaKnown RBP12.72□□□□□ -0.37
CSNK1D-212ENST00000580061 MECP2P51608 486 aaKnown RBP12.72□□□□□ -0.37
CSNK1D-212ENST00000580061 TAS2R31P59538 309 aa12.72□□□□□ -0.37
CSNK1D-212ENST00000580061 HILS1P60008 231 aa12.72□□□□□ -0.37
CSNK1D-212ENST00000580061 UBE2MP61081 183 aaKnown RBP12.72□□□□□ -0.37
CSNK1D-212ENST00000580061 SUPT4H1P63272 117 aaKnown RBP12.72□□□□□ -0.37
CSNK1D-212ENST00000580061 CBX3Q13185 183 aa12.72□□□□□ -0.37
CSNK1D-212ENST00000580061 SLC9A3R2Q15599 337 aa12.72□□□□□ -0.37
CSNK1D-212ENST00000580061 RGS21Q2M5E4 152 aa12.72□□□□□ -0.37
CSNK1D-212ENST00000580061 ZNF585BQ52M93 769 aa12.72□□□□□ -0.37
CSNK1D-212ENST00000580061 TMEM177Q53S58 311 aa12.72□□□□□ -0.37
CSNK1D-212ENST00000580061 PLET1Q6UQ28 207 aa12.72□□□□□ -0.37
CSNK1D-212ENST00000580061 OR4S2Q8NH73 311 aa12.72□□□□□ -0.37
CSNK1D-212ENST00000580061 CD300LFQ8TDQ1 290 aa12.72□□□□□ -0.37
CSNK1D-212ENST00000580061 FLYWCH2Q96CP2 140 aaKnown RBP12.72□□□□□ -0.37
CSNK1D-212ENST00000580061 FAM212BQ9NTI7 297 aaPredicted RBP12.72□□□□□ -0.37
CSNK1D-212ENST00000580061 PITPNC1Q9UKF7 332 aa12.72□□□□□ -0.37
CSNK1D-212ENST00000580061 VPREB3Q9UKI3 123 aa12.72□□□□□ -0.37
CSNK1D-212ENST00000580061 DNAJC9-AS1A6NH13 148 aa12.71□□□□□ -0.37
CSNK1D-212ENST00000580061 B3GALNT1O75752 331 aa12.71□□□□□ -0.37
CSNK1D-212ENST00000580061 OR5AC1P0C628 307 aa12.71□□□□□ -0.37
CSNK1D-212ENST00000580061 VSIG10L2P0DP72 767 aa12.71□□□□□ -0.37
CSNK1D-212ENST00000580061 SPNP16150 400 aa12.71□□□□□ -0.37
CSNK1D-212ENST00000580061 HNF4GQ14541 408 aa12.71□□□□□ -0.37
CSNK1D-212ENST00000580061 SP6Q3SY56 376 aa12.71□□□□□ -0.37
CSNK1D-212ENST00000580061 TMEM219Q86XT9 240 aa12.71□□□□□ -0.37
CSNK1D-212ENST00000580061 GALNT14Q96FL9 552 aa12.71□□□□□ -0.37
CSNK1D-212ENST00000580061 RBM14Q96PK6 669 aaKnown RBP12.71□□□□□ -0.37
CSNK1D-212ENST00000580061 RNF5Q99942 180 aa12.71□□□□□ -0.37
CSNK1D-212ENST00000580061 MARVELD1Q9BSK0 173 aa12.71□□□□□ -0.37
CSNK1D-212ENST00000580061 ALX4Q9H161 411 aaPredicted RBP12.71□□□□□ -0.37
CSNK1D-212ENST00000580061 TNFRSF19Q9NS68 423 aa12.71□□□□□ -0.37
CSNK1D-212ENST00000580061 KCNIP3Q9Y2W7 256 aa12.71□□□□□ -0.37
CSNK1D-212ENST00000580061 A0A0A6YYJ9 748 aa12.7□□□□□ -0.38
CSNK1D-212ENST00000580061 CLDN34H7C241 214 aa12.7□□□□□ -0.38
CSNK1D-212ENST00000580061 SHOXO15266 292 aa12.7□□□□□ -0.38
CSNK1D-212ENST00000580061 PEX14O75381 377 aa12.7□□□□□ -0.38
CSNK1D-212ENST00000580061 HPRT1P00492 218 aa12.7□□□□□ -0.38
CSNK1D-212ENST00000580061 OR4E1P0C645 316 aa12.7□□□□□ -0.38
CSNK1D-212ENST00000580061 UCP1P25874 307 aa12.7□□□□□ -0.38
CSNK1D-212ENST00000580061 LPAR6P43657 344 aa12.7□□□□□ -0.38
CSNK1D-212ENST00000580061 RPS16P62249 146 aaKnown RBP12.7□□□□□ -0.38
CSNK1D-212ENST00000580061 PPP1R1AQ13522 171 aa12.7□□□□□ -0.38
CSNK1D-212ENST00000580061 C11orf88Q6PI97 169 aa12.7□□□□□ -0.38
CSNK1D-212ENST00000580061 LIAT1Q6ZQX7 453 aa12.7□□□□□ -0.38
CSNK1D-212ENST00000580061 OSR1Q8TAX0 266 aaPredicted RBP12.7□□□□□ -0.38
CSNK1D-212ENST00000580061 GLYATL2Q8WU03 294 aa12.7□□□□□ -0.38
CSNK1D-212ENST00000580061 HARBI1Q96MB7 349 aa12.7□□□□□ -0.38
CSNK1D-212ENST00000580061 DUX5Q96PT3 197 aa12.7□□□□□ -0.38
CSNK1D-212ENST00000580061 JMJD8Q96S16 334 aa12.7□□□□□ -0.38
CSNK1D-212ENST00000580061 SLC25A33Q9BSK2 321 aa12.7□□□□□ -0.38
CSNK1D-212ENST00000580061 CHIAQ9BZP6 476 aa12.7□□□□□ -0.38
CSNK1D-212ENST00000580061 PLEKHA2Q9HB19 425 aa12.7□□□□□ -0.38
CSNK1D-212ENST00000580061 BEX1Q9HBH7 125 aa12.7□□□□□ -0.38
CSNK1D-212ENST00000580061 PLSCR3Q9NRY6 295 aa12.7□□□□□ -0.38
CSNK1D-212ENST00000580061 SRRM4A7MD48 611 aaKnown RBP12.69□□□□□ -0.38
CSNK1D-212ENST00000580061 TCF21O43680 179 aa12.69□□□□□ -0.38
CSNK1D-212ENST00000580061 OR2F2O95006 317 aa12.69□□□□□ -0.38
CSNK1D-212ENST00000580061 S1PR2O95136 353 aa12.69□□□□□ -0.38
CSNK1D-212ENST00000580061 SFT2D2O95562 160 aa12.69□□□□□ -0.38
CSNK1D-212ENST00000580061 VAMP1P23763 118 aa12.69□□□□□ -0.38
CSNK1D-212ENST00000580061 CNTFRP26992 372 aa12.69□□□□□ -0.38
CSNK1D-212ENST00000580061 LGALS7P47929 136 aa12.69□□□□□ -0.38
CSNK1D-212ENST00000580061 F2RL1P55085 397 aa12.69□□□□□ -0.38
CSNK1D-212ENST00000580061 RAG2P55895 527 aa12.69□□□□□ -0.38
CSNK1D-212ENST00000580061 C16orf82Q7Z2V1 217 aa12.69□□□□□ -0.38
CSNK1D-212ENST00000580061 OR8H1Q8NGG4 311 aa12.69□□□□□ -0.38
CSNK1D-212ENST00000580061 TMEM222Q9H0R3 208 aa12.69□□□□□ -0.38
CSNK1D-212ENST00000580061 NIPBLQ6KC79 2804 aaeCLIP12.69□□□□□ -0.38
CSNK1D-212ENST00000580061 C9orf170A2RU37 121 aa12.68□□□□□ -0.38
CSNK1D-212ENST00000580061 INMT-MINDY4F8WBC2 141 aa12.68□□□□□ -0.38
CSNK1D-212ENST00000580061 NBR2O15453 112 aa12.68□□□□□ -0.38
CSNK1D-212ENST00000580061 CHST1O43916 411 aa12.68□□□□□ -0.38
CSNK1D-212ENST00000580061 NDUFA3O95167 84 aa12.68□□□□□ -0.38
CSNK1D-212ENST00000580061 CDS2O95674 445 aa12.68□□□□□ -0.38
CSNK1D-212ENST00000580061 IFNA2P01563 188 aa12.68□□□□□ -0.38
CSNK1D-212ENST00000580061 IGKV1-39P01597 117 aa12.68□□□□□ -0.38
CSNK1D-212ENST00000580061 IGLV2-23P01705 113 aa12.68□□□□□ -0.38
CSNK1D-212ENST00000580061 IGKV1D-39P04432 117 aa12.68□□□□□ -0.38
CSNK1D-212ENST00000580061 SERPINE2P07093 398 aa12.68□□□□□ -0.38
CSNK1D-212ENST00000580061 ANXA3P12429 323 aa12.68□□□□□ -0.38
CSNK1D-212ENST00000580061 RPA2P15927 270 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms