RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 C3orf85A0A1B0GTC6 90 aa9.72□□□□□ -0.85
IFT20-207ENST00000578547 A6NDX4 124 aa9.72□□□□□ -0.85
IFT20-207ENST00000578547 CRYM-AS1A6NIL9 109 aa9.72□□□□□ -0.85
IFT20-207ENST00000578547 RAMP3O60896 148 aa9.72□□□□□ -0.85
IFT20-207ENST00000578547 RRASP10301 218 aa9.72□□□□□ -0.85
IFT20-207ENST00000578547 SPNP16150 400 aa9.72□□□□□ -0.85
IFT20-207ENST00000578547 ANXA7P20073 488 aaKnown RBP9.72□□□□□ -0.85
IFT20-207ENST00000578547 VAMP1P23763 118 aa9.72□□□□□ -0.85
IFT20-207ENST00000578547 KIR2DS2P43631 304 aa9.72□□□□□ -0.85
IFT20-207ENST00000578547 RAB25P57735 213 aa9.72□□□□□ -0.85
IFT20-207ENST00000578547 TAS2R31P59538 309 aa9.72□□□□□ -0.85
IFT20-207ENST00000578547 RPS16P62249 146 aaKnown RBP9.72□□□□□ -0.85
IFT20-207ENST00000578547 TAGLNQ01995 201 aaKnown RBP9.72□□□□□ -0.85
IFT20-207ENST00000578547 SLC9A3R2Q15599 337 aa9.72□□□□□ -0.85
IFT20-207ENST00000578547 SP6Q3SY56 376 aa9.72□□□□□ -0.85
IFT20-207ENST00000578547 HARBI1Q96MB7 349 aa9.72□□□□□ -0.85
IFT20-207ENST00000578547 TP53RKQ96S44 253 aa9.72□□□□□ -0.85
IFT20-207ENST00000578547 CHIAQ9BZP6 476 aa9.72□□□□□ -0.85
IFT20-207ENST00000578547 ESM1Q9NQ30 184 aa9.72□□□□□ -0.85
IFT20-207ENST00000578547 PITPNC1Q9UKF7 332 aa9.72□□□□□ -0.85
IFT20-207ENST00000578547 VPREB3Q9UKI3 123 aa9.72□□□□□ -0.85
IFT20-207ENST00000578547 FAM90A9PA6NNJ1 464 aa9.71□□□□□ -0.86
IFT20-207ENST00000578547 NCBP2LA6PVI3 153 aaKnown RBP9.71□□□□□ -0.86
IFT20-207ENST00000578547 H0Y980 276 aa9.71□□□□□ -0.86
IFT20-207ENST00000578547 SHOXO15266 292 aa9.71□□□□□ -0.86
IFT20-207ENST00000578547 TCF21O43680 179 aa9.71□□□□□ -0.86
IFT20-207ENST00000578547 PTTG1O95997 202 aa9.71□□□□□ -0.86
IFT20-207ENST00000578547 SERPINE2P07093 398 aa9.71□□□□□ -0.86
IFT20-207ENST00000578547 H2AFB2P0C5Z0 115 aa9.71□□□□□ -0.86
IFT20-207ENST00000578547 OR5AC1P0C628 307 aa9.71□□□□□ -0.86
IFT20-207ENST00000578547 CNTFRP26992 372 aa9.71□□□□□ -0.86
IFT20-207ENST00000578547 BRWD1-AS2P59051 145 aa9.71□□□□□ -0.86
IFT20-207ENST00000578547 HILS1P60008 231 aa9.71□□□□□ -0.86
IFT20-207ENST00000578547 MMDQ15546 238 aa9.71□□□□□ -0.86
IFT20-207ENST00000578547 RGS21Q2M5E4 152 aa9.71□□□□□ -0.86
IFT20-207ENST00000578547 TRIM16LQ309B1 348 aa9.71□□□□□ -0.86
IFT20-207ENST00000578547 DHRS7BQ6IAN0 325 aaPredicted RBP9.71□□□□□ -0.86
IFT20-207ENST00000578547 PLET1Q6UQ28 207 aa9.71□□□□□ -0.86
IFT20-207ENST00000578547 CCBE1Q6UXH8 406 aaPredicted RBP9.71□□□□□ -0.86
IFT20-207ENST00000578547 PRIMA1Q86XR5 153 aa9.71□□□□□ -0.86
IFT20-207ENST00000578547 THNSL2Q86YJ6 484 aa9.71□□□□□ -0.86
IFT20-207ENST00000578547 SGPP2Q8IWX5 399 aa9.71□□□□□ -0.86
IFT20-207ENST00000578547 OR4C13Q8NGP0 309 aa9.71□□□□□ -0.86
IFT20-207ENST00000578547 FLYWCH2Q96CP2 140 aaKnown RBP9.71□□□□□ -0.86
IFT20-207ENST00000578547 RITA1Q96K30 269 aa9.71□□□□□ -0.86
IFT20-207ENST00000578547 JMJD8Q96S16 334 aa9.71□□□□□ -0.86
IFT20-207ENST00000578547 SLC25A33Q9BSK2 321 aa9.71□□□□□ -0.86
IFT20-207ENST00000578547 PRR13Q9NZ81 148 aa9.71□□□□□ -0.86
IFT20-207ENST00000578547 NUBP2Q9Y5Y2 271 aa9.71□□□□□ -0.86
IFT20-207ENST00000578547 POMT1Q9Y6A1 747 aa9.71□□□□□ -0.86
IFT20-207ENST00000578547 CHST1O43916 411 aa9.7□□□□□ -0.86
IFT20-207ENST00000578547 S1PR2O95136 353 aa9.7□□□□□ -0.86
IFT20-207ENST00000578547 IFNA2P01563 188 aa9.7□□□□□ -0.86
IFT20-207ENST00000578547 VSIG10L2P0DP72 767 aa9.7□□□□□ -0.86
IFT20-207ENST00000578547 RPA2P15927 270 aa9.7□□□□□ -0.86
IFT20-207ENST00000578547 LPAR6P43657 344 aa9.7□□□□□ -0.86
IFT20-207ENST00000578547 SRSF2Q01130 221 aaKnown RBP9.7□□□□□ -0.86
IFT20-207ENST00000578547 PPP1R1AQ13522 171 aa9.7□□□□□ -0.86
IFT20-207ENST00000578547 EBI3Q14213 229 aa9.7□□□□□ -0.86
IFT20-207ENST00000578547 C4orf46Q504U0 113 aa9.7□□□□□ -0.86
IFT20-207ENST00000578547 TMEM128Q5BJH2 165 aa9.7□□□□□ -0.86
IFT20-207ENST00000578547 SLC25A42Q86VD7 318 aa9.7□□□□□ -0.86
IFT20-207ENST00000578547 TMEM86BQ8N661 226 aa9.7□□□□□ -0.86
IFT20-207ENST00000578547 CD300LFQ8TDQ1 290 aa9.7□□□□□ -0.86
IFT20-207ENST00000578547 CASTOR1Q8WTX7 329 aa9.7□□□□□ -0.86
IFT20-207ENST00000578547 RBFOX2O43251 390 aaKnown RBP eCLIP9.69□□□□□ -0.86
IFT20-207ENST00000578547 GPR137BO60478 399 aa9.69□□□□□ -0.86
IFT20-207ENST00000578547 OR2F2O95006 317 aa9.69□□□□□ -0.86
IFT20-207ENST00000578547 HLA-AP01891 365 aaKnown RBP9.69□□□□□ -0.86
IFT20-207ENST00000578547 OR4E1P0C645 316 aa9.69□□□□□ -0.86
IFT20-207ENST00000578547 ANXA3P12429 323 aa9.69□□□□□ -0.86
IFT20-207ENST00000578547 F2RL1P55085 397 aa9.69□□□□□ -0.86
IFT20-207ENST00000578547 UBA52P62987 128 aaKnown RBP9.69□□□□□ -0.86
IFT20-207ENST00000578547 SUPT4H1P63272 117 aaKnown RBP9.69□□□□□ -0.86
IFT20-207ENST00000578547 PLGLAQ15195 96 aa9.69□□□□□ -0.86
IFT20-207ENST00000578547 ZNF585BQ52M93 769 aa9.69□□□□□ -0.86
IFT20-207ENST00000578547 TMEM177Q53S58 311 aa9.69□□□□□ -0.86
IFT20-207ENST00000578547 C11orf88Q6PI97 169 aa9.69□□□□□ -0.86
IFT20-207ENST00000578547 VKORC1L1Q8N0U8 176 aa9.69□□□□□ -0.86
IFT20-207ENST00000578547 Q8N6K4 173 aa9.69□□□□□ -0.86
IFT20-207ENST00000578547 DUSP18Q8NEJ0 188 aa9.69□□□□□ -0.86
IFT20-207ENST00000578547 OSR1Q8TAX0 266 aaPredicted RBP9.69□□□□□ -0.86
IFT20-207ENST00000578547 RBM14Q96PK6 669 aaKnown RBP9.69□□□□□ -0.86
IFT20-207ENST00000578547 TSNAXQ99598 290 aaKnown RBP9.69□□□□□ -0.86
IFT20-207ENST00000578547 KIAA1456Q9P272 454 aa9.69□□□□□ -0.86
IFT20-207ENST00000578547 KCNIP3Q9Y2W7 256 aa9.69□□□□□ -0.86
IFT20-207ENST00000578547 MOB4Q9Y3A3 225 aa9.69□□□□□ -0.86
IFT20-207ENST00000578547 CUBNO60494 3623 aa9.68□□□□□ -0.86
IFT20-207ENST00000578547 A0A0A6YYJ9 748 aa9.68□□□□□ -0.86
IFT20-207ENST00000578547 SH2D7A6NKC9 451 aaPredicted RBP9.68□□□□□ -0.86
IFT20-207ENST00000578547 NBR2O15453 112 aa9.68□□□□□ -0.86
IFT20-207ENST00000578547 SLC25A17O43808 307 aa9.68□□□□□ -0.86
IFT20-207ENST00000578547 SFT2D2O95562 160 aa9.68□□□□□ -0.86
IFT20-207ENST00000578547 HPRT1P00492 218 aa9.68□□□□□ -0.86
IFT20-207ENST00000578547 UBE2MP61081 183 aaKnown RBP9.68□□□□□ -0.86
IFT20-207ENST00000578547 ERVK-16P61578 105 aa9.68□□□□□ -0.86
IFT20-207ENST00000578547 PSG5Q15238 335 aa9.68□□□□□ -0.86
IFT20-207ENST00000578547 LIAT1Q6ZQX7 453 aa9.68□□□□□ -0.86
IFT20-207ENST00000578547 SSX9Q7RTT3 188 aa9.68□□□□□ -0.86
IFT20-207ENST00000578547 TCTEX1D1Q8N7M0 179 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms