RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 AUNIPQ9H7T9 357 aa5.24□□□□□ -1.57
CHD3-213ENST00000571249 PLEKHA3Q9HB20 300 aa5.24□□□□□ -1.57
CHD3-213ENST00000571249 RANGRFQ9HD47 186 aaPredicted RBP5.24□□□□□ -1.57
CHD3-213ENST00000571249 TAS2R8Q9NYW2 309 aa5.24□□□□□ -1.57
CHD3-213ENST00000571249 TAS2R3Q9NYW6 316 aa5.24□□□□□ -1.57
CHD3-213ENST00000571249 GHRLQ9UBU3 117 aa5.24□□□□□ -1.57
CHD3-213ENST00000571249 KCNK7Q9Y2U2 307 aa5.24□□□□□ -1.57
CHD3-213ENST00000571249 N6AMT1Q9Y5N5 214 aa5.24□□□□□ -1.57
CHD3-213ENST00000571249 LRP1Q07954 4544 aaKnown RBP5.24□□□□□ -1.57
CHD3-213ENST00000571249 FAT4Q6V0I7 4981 aa5.24□□□□□ -1.57
CHD3-213ENST00000571249 IGKV1-9A0A0C4DH69 117 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 RFPL4AA6NLU0 287 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 LEUTXA8MZ59 168 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 RFPL4AL1F8VTS6 287 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 SLC33A1O00400 549 aaPredicted RBP5.23□□□□□ -1.57
CHD3-213ENST00000571249 FGF16O43320 207 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 RBBP9O75884 186 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 DHFRP00374 187 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 IGHG4P01861 327 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 TCRBP04435 133 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 PRB4P10163 310 aaPredicted RBP5.23□□□□□ -1.57
CHD3-213ENST00000571249 ZNF20P17024 532 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 PSMB8P28062 276 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 PRSS3P35030 304 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 GPR12P47775 334 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 LINC00205P59089 165 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 RUNX1Q01196 453 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 CD300CQ08708 224 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 MADCAM1Q13477 382 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 HNF4GQ14541 408 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 TATDN3Q17R31 274 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 CD300EQ496F6 205 aaPredicted RBP5.23□□□□□ -1.57
CHD3-213ENST00000571249 RSBN1Q5VWQ0 802 aaPredicted RBP5.23□□□□□ -1.57
CHD3-213ENST00000571249 ETFRF1Q6IPR1 90 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 ASCL4Q6XD76 172 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 ZNF561Q8N587 486 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 FAM89BQ8N5H3 189 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 GVQW1Q8N7I0 195 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 ZNF491Q8N8L2 437 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 OR56B4Q8NH76 319 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 AQP3Q92482 292 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 UBE2E2Q96LR5 201 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 OVOL2Q9BRP0 275 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 CHST5Q9GZS9 411 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 ALX4Q9H161 411 aaPredicted RBP5.23□□□□□ -1.57
CHD3-213ENST00000571249 TMEM133Q9H2Q1 129 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 KLK15Q9H2R5 256 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 HRASLSQ9HDD0 168 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 VSIG4Q9Y279 399 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 MRPS7Q9Y2R9 242 aaKnown RBP5.23□□□□□ -1.57
CHD3-213ENST00000571249 ALG5Q9Y673 324 aa5.23□□□□□ -1.57
CHD3-213ENST00000571249 TRAV18A0A075B6X5 111 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 METTL21EPA6NDL7 271 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 LINC01619G3V211 115 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 XRCC2O43543 280 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 PRAF2O60831 178 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 CA11O75493 328 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 CCNKO75909 580 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 KDM4BO94953 1096 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 CD74P04233 296 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 IL5P05113 134 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 HOXB5P09067 269 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 SLC2A1P11166 492 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 MPZP25189 248 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 DUSP1P28562 367 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 PRDX2P32119 198 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 ZNF93P35789 620 aaPredicted RBP5.22□□□□□ -1.57
CHD3-213ENST00000571249 ACTBP60709 375 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 SUMO2P61956 95 aaKnown RBP5.22□□□□□ -1.57
CHD3-213ENST00000571249 CFHR3Q02985 330 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 UNC119Q13432 240 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 KIAA0141Q14154 515 aaPredicted RBP5.22□□□□□ -1.57
CHD3-213ENST00000571249 HES1Q14469 280 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 RNF151Q2KHN1 245 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 TPTE2P1Q5T6R2 138 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 LCE2CQ5TA81 110 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 ANGPTL5Q86XS5 388 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 TCTE3Q8IZS6 198 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 JAGN1Q8N5M9 183 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 TMEM229BQ8NBD8 167 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 OR13C9Q8NGT0 318 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 KCNG3Q8TAE7 436 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 MYOZ3Q8TDC0 251 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 C2CD4CQ8TF44 421 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 SPSB1Q96BD6 273 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 TMEM68Q96MH6 324 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 ZNF714Q96N38 554 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 RTL8AQ9BWD3 113 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 PAPOLGQ9BWT3 736 aaKnown RBP5.22□□□□□ -1.57
CHD3-213ENST00000571249 ATG5Q9H1Y0 275 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 OR51J1Q9H342 316 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 MGAT4CQ9UBM8 478 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 KLK11Q9UBX7 282 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 ANAPC10Q9UM13 185 aa5.22□□□□□ -1.57
CHD3-213ENST00000571249 hCG_38984A0A1B0GV85 526 aa5.21□□□□□ -1.58
CHD3-213ENST00000571249 TMEM210A6NLX4 147 aa5.21□□□□□ -1.58
CHD3-213ENST00000571249 FOXI3A8MTJ6 420 aaPredicted RBP5.21□□□□□ -1.58
CHD3-213ENST00000571249 H0Y980 276 aa5.21□□□□□ -1.58
CHD3-213ENST00000571249 MMP23AO75900 390 aa5.21□□□□□ -1.58
CHD3-213ENST00000571249 NDUFB6O95139 128 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms