RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 CEACAM19Q7Z692 300 aa9.09□□□□□ -0.95
CAPN3-220ENST00000569827 NANOGP1Q8N7R0 232 aa9.09□□□□□ -0.95
CAPN3-220ENST00000569827 ACOT12Q8WYK0 555 aa9.09□□□□□ -0.95
CAPN3-220ENST00000569827 LINC00476Q8WZB0 136 aa9.09□□□□□ -0.95
CAPN3-220ENST00000569827 TMEM203Q969S6 136 aa9.09□□□□□ -0.95
CAPN3-220ENST00000569827 C12orf4Q9NQ89 552 aa9.09□□□□□ -0.95
CAPN3-220ENST00000569827 PSORS1C1Q9UIG5 152 aa9.09□□□□□ -0.95
CAPN3-220ENST00000569827 AK6Q9Y3D8 172 aaKnown RBP9.09□□□□□ -0.95
CAPN3-220ENST00000569827 DNAH6Q9C0G6 4158 aa9.09□□□□□ -0.96
CAPN3-220ENST00000569827 A0A0B4J203 849 aa9.08□□□□□ -0.96
CAPN3-220ENST00000569827 J3QRK9 145 aa9.08□□□□□ -0.96
CAPN3-220ENST00000569827 CRYZL1O95825 349 aa9.08□□□□□ -0.96
CAPN3-220ENST00000569827 OR9G9P0C7N8 305 aa9.08□□□□□ -0.96
CAPN3-220ENST00000569827 SRMP19623 302 aa9.08□□□□□ -0.96
CAPN3-220ENST00000569827 EWSR1Q01844 656 aaKnown RBP eCLIP9.08□□□□□ -0.96
CAPN3-220ENST00000569827 TATDN3Q17R31 274 aa9.08□□□□□ -0.96
CAPN3-220ENST00000569827 PLAC9Q5JTB6 97 aa9.08□□□□□ -0.96
CAPN3-220ENST00000569827 DHRSXQ8N5I4 330 aa9.08□□□□□ -0.96
CAPN3-220ENST00000569827 SETD9Q8NE22 299 aa9.08□□□□□ -0.96
CAPN3-220ENST00000569827 OR6M1Q8NGM8 313 aa9.08□□□□□ -0.96
CAPN3-220ENST00000569827 SRSF12Q8WXF0 261 aaKnown RBP9.08□□□□□ -0.96
CAPN3-220ENST00000569827 SNAPC3Q92966 411 aa9.08□□□□□ -0.96
CAPN3-220ENST00000569827 PLGRKTQ9HBL7 147 aa9.08□□□□□ -0.96
CAPN3-220ENST00000569827 SLC2A8Q9NY64 477 aa9.08□□□□□ -0.96
CAPN3-220ENST00000569827 SIGLEC8Q9NYZ4 499 aa9.08□□□□□ -0.96
CAPN3-220ENST00000569827 PEMTQ9UBM1 199 aa9.08□□□□□ -0.96
CAPN3-220ENST00000569827 A0A075B6Q4 140 aa9.07□□□□□ -0.96
CAPN3-220ENST00000569827 LINC00473A8K010 186 aa9.07□□□□□ -0.96
CAPN3-220ENST00000569827 TRDCB7Z8K6 153 aa9.07□□□□□ -0.96
CAPN3-220ENST00000569827 OR2J3O76001 311 aa9.07□□□□□ -0.96
CAPN3-220ENST00000569827 CD1AP06126 327 aa9.07□□□□□ -0.96
CAPN3-220ENST00000569827 GSTT2P0CG29 244 aa9.07□□□□□ -0.96
CAPN3-220ENST00000569827 GSTT2BP0CG30 244 aa9.07□□□□□ -0.96
CAPN3-220ENST00000569827 DEFB114Q30KQ6 69 aa9.07□□□□□ -0.96
CAPN3-220ENST00000569827 TMEM177Q53S58 311 aa9.07□□□□□ -0.96
CAPN3-220ENST00000569827 OR2B11Q5JQS5 317 aa9.07□□□□□ -0.96
CAPN3-220ENST00000569827 TTC23Q5W5X9 447 aa9.07□□□□□ -0.96
CAPN3-220ENST00000569827 IL17DQ8TAD2 202 aa9.07□□□□□ -0.96
CAPN3-220ENST00000569827 PHYHIPQ92561 330 aa9.07□□□□□ -0.96
CAPN3-220ENST00000569827 USMG5Q96IX5 58 aa9.07□□□□□ -0.96
CAPN3-220ENST00000569827 URM1Q9BTM9 101 aaKnown RBP9.07□□□□□ -0.96
CAPN3-220ENST00000569827 RIMS4Q9H426 269 aaPredicted RBP9.07□□□□□ -0.96
CAPN3-220ENST00000569827 HMX3A6NHT5 357 aa9.06□□□□□ -0.96
CAPN3-220ENST00000569827 C2orf70A6NJV1 201 aa9.06□□□□□ -0.96
CAPN3-220ENST00000569827 FABP7O15540 132 aa9.06□□□□□ -0.96
CAPN3-220ENST00000569827 OR2C1O95371 312 aa9.06□□□□□ -0.96
CAPN3-220ENST00000569827 FOLR2P14207 255 aa9.06□□□□□ -0.96
CAPN3-220ENST00000569827 ATP5G2Q06055 141 aa9.06□□□□□ -0.96
CAPN3-220ENST00000569827 PRSS8Q16651 343 aa9.06□□□□□ -0.96
CAPN3-220ENST00000569827 LIPKQ5VXJ0 399 aa9.06□□□□□ -0.96
CAPN3-220ENST00000569827 C8orf59Q8N0T1 100 aaPredicted RBP9.06□□□□□ -0.96
CAPN3-220ENST00000569827 FAM89BQ8N5H3 189 aa9.06□□□□□ -0.96
CAPN3-220ENST00000569827 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.06□□□□□ -0.96
CAPN3-220ENST00000569827 THRSPQ92748 146 aa9.06□□□□□ -0.96
CAPN3-220ENST00000569827 ZNF430Q9H8G1 570 aaPredicted RBP9.06□□□□□ -0.96
CAPN3-220ENST00000569827 KCNK7Q9Y2U2 307 aa9.06□□□□□ -0.96
CAPN3-220ENST00000569827 IGKV1D-8A0A087WSZ0 117 aa9.05□□□□□ -0.96
CAPN3-220ENST00000569827 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.05□□□□□ -0.96
CAPN3-220ENST00000569827 CXorf65A6NEN9 183 aa9.05□□□□□ -0.96
CAPN3-220ENST00000569827 SLC17A2O00624 439 aa9.05□□□□□ -0.96
CAPN3-220ENST00000569827 SCAF4O95104 1147 aaKnown RBP9.05□□□□□ -0.96
CAPN3-220ENST00000569827 FCGR3AP08637 254 aa9.05□□□□□ -0.96
CAPN3-220ENST00000569827 UCHL1P09936 223 aa9.05□□□□□ -0.96
CAPN3-220ENST00000569827 SAA1P0DJI8 122 aaPredicted RBP9.05□□□□□ -0.96
CAPN3-220ENST00000569827 RPS25P62851 125 aaKnown RBP9.05□□□□□ -0.96
CAPN3-220ENST00000569827 MED22Q15528 200 aa9.05□□□□□ -0.96
CAPN3-220ENST00000569827 RAB11BQ15907 218 aa9.05□□□□□ -0.96
CAPN3-220ENST00000569827 RTL8BQ17RB0 113 aa9.05□□□□□ -0.96
CAPN3-220ENST00000569827 C15orf32Q32M92 178 aa9.05□□□□□ -0.96
CAPN3-220ENST00000569827 VMA21Q3ZAQ7 101 aa9.05□□□□□ -0.96
CAPN3-220ENST00000569827 HES5Q5TA89 166 aa9.05□□□□□ -0.96
CAPN3-220ENST00000569827 TMEM91Q6ZNR0 172 aa9.05□□□□□ -0.96
CAPN3-220ENST00000569827 TMEM61Q8N0U2 210 aa9.05□□□□□ -0.96
CAPN3-220ENST00000569827 VKORC1L1Q8N0U8 176 aa9.05□□□□□ -0.96
CAPN3-220ENST00000569827 OR4A4PQ8NGN8 299 aa9.05□□□□□ -0.96
CAPN3-220ENST00000569827 OR2K2Q8NGT1 345 aa9.05□□□□□ -0.96
CAPN3-220ENST00000569827 DDB2Q92466 427 aa9.05□□□□□ -0.96
CAPN3-220ENST00000569827 TMEM68Q96MH6 324 aa9.05□□□□□ -0.96
CAPN3-220ENST00000569827 OVOL2Q9BRP0 275 aa9.05□□□□□ -0.96
CAPN3-220ENST00000569827 ZC4H2Q9NQZ6 224 aa9.05□□□□□ -0.96
CAPN3-220ENST00000569827 FKBP14Q9NWM8 211 aa9.05□□□□□ -0.96
CAPN3-220ENST00000569827 HSF4Q9ULV5 492 aa9.05□□□□□ -0.96
CAPN3-220ENST00000569827 MGAT4AQ9UM21 535 aa9.05□□□□□ -0.96
CAPN3-220ENST00000569827 LSM2Q9Y333 95 aaKnown RBP9.05□□□□□ -0.96
CAPN3-220ENST00000569827 RBM7Q9Y580 266 aaKnown RBP9.05□□□□□ -0.96
CAPN3-220ENST00000569827 DMRT1Q9Y5R6 373 aa9.05□□□□□ -0.96
CAPN3-220ENST00000569827 HECTD4Q9Y4D8 3996 aa9.05□□□□□ -0.96
CAPN3-220ENST00000569827 TMEM272A0A1B0GTI8 110 aa9.04□□□□□ -0.96
CAPN3-220ENST00000569827 FAM223BA6NKX1 122 aa9.04□□□□□ -0.96
CAPN3-220ENST00000569827 PTGES3LE9PB15 166 aa9.04□□□□□ -0.96
CAPN3-220ENST00000569827 TUSC2O75896 110 aa9.04□□□□□ -0.96
CAPN3-220ENST00000569827 CDK1P06493 297 aa9.04□□□□□ -0.96
CAPN3-220ENST00000569827 CD37P11049 281 aa9.04□□□□□ -0.96
CAPN3-220ENST00000569827 GNB3P16520 340 aa9.04□□□□□ -0.96
CAPN3-220ENST00000569827 DUTP33316 252 aaKnown RBP9.04□□□□□ -0.96
CAPN3-220ENST00000569827 UBE2KP61086 200 aa9.04□□□□□ -0.96
CAPN3-220ENST00000569827 CBX3Q13185 183 aa9.04□□□□□ -0.96
CAPN3-220ENST00000569827 FAM223AQ8IWN6 122 aa9.04□□□□□ -0.96
CAPN3-220ENST00000569827 RPP25LQ8N5L8 163 aaKnown RBP9.04□□□□□ -0.96
CAPN3-220ENST00000569827 MS4A15Q8N5U1 240 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms