RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 RLN1P04808 185 aa18.81■□□□□ 0.6
RAB40C-212ENST00000569575 ANXA3P12429 323 aa18.81■□□□□ 0.6
RAB40C-212ENST00000569575 RPL30P62888 115 aaKnown RBP18.81■□□□□ 0.6
RAB40C-212ENST00000569575 HES1Q14469 280 aa18.81■□□□□ 0.6
RAB40C-212ENST00000569575 EAF1Q96JC9 268 aaPredicted RBP18.81■□□□□ 0.6
RAB40C-212ENST00000569575 TSNAXQ99598 290 aaKnown RBP18.81■□□□□ 0.6
RAB40C-212ENST00000569575 PLEKHA2Q9HB19 425 aa18.81■□□□□ 0.6
RAB40C-212ENST00000569575 TEX13DA0A0J9YY54 714 aaPredicted RBP18.8■□□□□ 0.6
RAB40C-212ENST00000569575 C3orf85A0A1B0GTC6 90 aa18.8■□□□□ 0.6
RAB40C-212ENST00000569575 A6NDX4 124 aa18.8■□□□□ 0.6
RAB40C-212ENST00000569575 CRYM-AS1A6NIL9 109 aa18.8■□□□□ 0.6
RAB40C-212ENST00000569575 TNFSF12O43508 249 aa18.8■□□□□ 0.6
RAB40C-212ENST00000569575 ATG12O94817 140 aa18.8■□□□□ 0.6
RAB40C-212ENST00000569575 OR2F2O95006 317 aa18.8■□□□□ 0.6
RAB40C-212ENST00000569575 SPDEFO95238 335 aa18.8■□□□□ 0.6
RAB40C-212ENST00000569575 IGHV4-59P01825 116 aa18.8■□□□□ 0.6
RAB40C-212ENST00000569575 TMEM11P17152 192 aa18.8■□□□□ 0.6
RAB40C-212ENST00000569575 MECP2P51608 486 aaKnown RBP18.8■□□□□ 0.6
RAB40C-212ENST00000569575 DHODHQ02127 395 aa18.8■□□□□ 0.6
RAB40C-212ENST00000569575 SLC25A42Q86VD7 318 aa18.8■□□□□ 0.6
RAB40C-212ENST00000569575 SPAG16Q8N0X2 631 aa18.8■□□□□ 0.6
RAB40C-212ENST00000569575 Q8N6K4 173 aa18.8■□□□□ 0.6
RAB40C-212ENST00000569575 RBM14Q96PK6 669 aaKnown RBP18.8■□□□□ 0.6
RAB40C-212ENST00000569575 NAA60Q9H7X0 242 aa18.8■□□□□ 0.6
RAB40C-212ENST00000569575 COMMD9Q9P000 198 aa18.8■□□□□ 0.6
RAB40C-212ENST00000569575 FGF16O43320 207 aa18.79■□□□□ 0.6
RAB40C-212ENST00000569575 FCGR3BO75015 233 aa18.79■□□□□ 0.6
RAB40C-212ENST00000569575 HRASP01112 189 aa18.79■□□□□ 0.6
RAB40C-212ENST00000569575 SRPXP78539 464 aa18.79■□□□□ 0.6
RAB40C-212ENST00000569575 SLC9A3R2Q15599 337 aa18.79■□□□□ 0.6
RAB40C-212ENST00000569575 PLET1Q6UQ28 207 aa18.79■□□□□ 0.6
RAB40C-212ENST00000569575 GLDNQ6ZMI3 551 aaPredicted RBP18.79■□□□□ 0.6
RAB40C-212ENST00000569575 NPBQ8NG41 125 aa18.79■□□□□ 0.6
RAB40C-212ENST00000569575 OR51H1Q8NH63 302 aa18.79■□□□□ 0.6
RAB40C-212ENST00000569575 ZFAND2BQ8WV99 257 aa18.79■□□□□ 0.6
RAB40C-212ENST00000569575 C20orf85Q9H1P6 137 aa18.79■□□□□ 0.6
RAB40C-212ENST00000569575 RNASE1P07998 156 aaKnown RBP18.78■□□□□ 0.6
RAB40C-212ENST00000569575 PI3P19957 117 aa18.78■□□□□ 0.6
RAB40C-212ENST00000569575 NRARPQ7Z6K4 114 aa18.78■□□□□ 0.6
RAB40C-212ENST00000569575 MXRA5Q9NR99 2828 aa18.78■□□□□ 0.6
RAB40C-212ENST00000569575 IGHV3-72A0A0B4J1Y9 119 aa18.77■□□□□ 0.6
RAB40C-212ENST00000569575 DNAJC9-AS1A6NH13 148 aa18.77■□□□□ 0.6
RAB40C-212ENST00000569575 TRIM77I1YAP6 450 aa18.77■□□□□ 0.6
RAB40C-212ENST00000569575 SERPINE2P07093 398 aa18.77■□□□□ 0.6
RAB40C-212ENST00000569575 AKR1C4P17516 323 aa18.77■□□□□ 0.6
RAB40C-212ENST00000569575 RPS16P62249 146 aaKnown RBP18.77■□□□□ 0.6
RAB40C-212ENST00000569575 RGS21Q2M5E4 152 aa18.77■□□□□ 0.6
RAB40C-212ENST00000569575 TMED4Q7Z7H5 227 aa18.77■□□□□ 0.6
RAB40C-212ENST00000569575 VSTM2AQ8TAG5 236 aa18.77■□□□□ 0.6
RAB40C-212ENST00000569575 TMEM222Q9H0R3 208 aa18.77■□□□□ 0.6
RAB40C-212ENST00000569575 KIAA1456Q9P272 454 aa18.77■□□□□ 0.6
RAB40C-212ENST00000569575 SHOXO15266 292 aa18.76■□□□□ 0.59
RAB40C-212ENST00000569575 CRYZL1O95825 349 aa18.76■□□□□ 0.59
RAB40C-212ENST00000569575 IGKV1-16P04430 117 aa18.76■□□□□ 0.59
RAB40C-212ENST00000569575 H2AFB2P0C5Z0 115 aa18.76■□□□□ 0.59
RAB40C-212ENST00000569575 NQO2P16083 231 aa18.76■□□□□ 0.59
RAB40C-212ENST00000569575 UCP1P25874 307 aa18.76■□□□□ 0.59
RAB40C-212ENST00000569575 PAX6P26367 422 aa18.76■□□□□ 0.59
RAB40C-212ENST00000569575 POU2AF1Q16633 256 aa18.76■□□□□ 0.59
RAB40C-212ENST00000569575 IL22RA2Q969J5 263 aa18.76■□□□□ 0.59
RAB40C-212ENST00000569575 SLC25A33Q9BSK2 321 aa18.76■□□□□ 0.59
RAB40C-212ENST00000569575 NUDT15Q9NV35 164 aa18.76■□□□□ 0.59
RAB40C-212ENST00000569575 MOB4Q9Y3A3 225 aa18.76■□□□□ 0.59
RAB40C-212ENST00000569575 ARPC1BO15143 372 aaKnown RBP18.75■□□□□ 0.59
RAB40C-212ENST00000569575 CREBL2O60519 120 aaPredicted RBP18.75■□□□□ 0.59
RAB40C-212ENST00000569575 PEX14O75381 377 aa18.75■□□□□ 0.59
RAB40C-212ENST00000569575 NDUFA3O95167 84 aa18.75■□□□□ 0.59
RAB40C-212ENST00000569575 FGF2P09038 288 aa18.75■□□□□ 0.59
RAB40C-212ENST00000569575 BRWD1-AS2P59051 145 aa18.75■□□□□ 0.59
RAB40C-212ENST00000569575 LINC00205P59089 165 aa18.75■□□□□ 0.59
RAB40C-212ENST00000569575 ADAD2Q8NCV1 583 aaKnown RBP18.75■□□□□ 0.59
RAB40C-212ENST00000569575 TMEM230Q96A57 120 aa18.75■□□□□ 0.59
RAB40C-212ENST00000569575 HARBI1Q96MB7 349 aa18.75■□□□□ 0.59
RAB40C-212ENST00000569575 MARVELD1Q9BSK0 173 aa18.75■□□□□ 0.59
RAB40C-212ENST00000569575 NBR2O15453 112 aa18.74■□□□□ 0.59
RAB40C-212ENST00000569575 PRAF2O60831 178 aa18.74■□□□□ 0.59
RAB40C-212ENST00000569575 CDS2O95674 445 aa18.74■□□□□ 0.59
RAB40C-212ENST00000569575 VMA21Q3ZAQ7 101 aa18.74■□□□□ 0.59
RAB40C-212ENST00000569575 TEX45Q8NA69 505 aa18.74■□□□□ 0.59
RAB40C-212ENST00000569575 MINDY2Q8NBR6 621 aa18.74■□□□□ 0.59
RAB40C-212ENST00000569575 CHIAQ9BZP6 476 aa18.74■□□□□ 0.59
RAB40C-212ENST00000569575 RANBP3Q9H6Z4 567 aaPredicted RBP18.74■□□□□ 0.59
RAB40C-212ENST00000569575 TEP1Q99973 2627 aaKnown RBP18.74■□□□□ 0.59
RAB40C-212ENST00000569575 OR4E1P0C645 316 aa18.73■□□□□ 0.59
RAB40C-212ENST00000569575 CD24P25063 80 aa18.73■□□□□ 0.59
RAB40C-212ENST00000569575 LPAR6P43657 344 aa18.73■□□□□ 0.59
RAB40C-212ENST00000569575 UBE2KP61086 200 aa18.73■□□□□ 0.59
RAB40C-212ENST00000569575 ERVK-16P61578 105 aa18.73■□□□□ 0.59
RAB40C-212ENST00000569575 UBA52P62987 128 aaKnown RBP18.73■□□□□ 0.59
RAB40C-212ENST00000569575 MMDQ15546 238 aa18.73■□□□□ 0.59
RAB40C-212ENST00000569575 ZNF585BQ52M93 769 aa18.73■□□□□ 0.59
RAB40C-212ENST00000569575 CCBE1Q6UXH8 406 aaPredicted RBP18.73■□□□□ 0.59
RAB40C-212ENST00000569575 OR4A5Q8NH83 315 aa18.73■□□□□ 0.59
RAB40C-212ENST00000569575 GLYATL2Q8WU03 294 aa18.73■□□□□ 0.59
RAB40C-212ENST00000569575 TMEM56Q96MV1 263 aa18.73■□□□□ 0.59
RAB40C-212ENST00000569575 TP53RKQ96S44 253 aa18.73■□□□□ 0.59
RAB40C-212ENST00000569575 GPHA2Q96T91 129 aa18.73■□□□□ 0.59
RAB40C-212ENST00000569575 NPFFR1Q9GZQ6 430 aa18.73■□□□□ 0.59
RAB40C-212ENST00000569575 PLSCR3Q9NRY6 295 aa18.73■□□□□ 0.59
RAB40C-212ENST00000569575 TMEM56-RWDD3S4R434 201 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms