RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, human

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USB1-215	ENST00000569252	IGLV2-14	P01704	120 aa		12.85	□□□□□ -0.35
USB1-215	ENST00000569252	RLN1	P04808	185 aa		12.85	□□□□□ -0.35
USB1-215	ENST00000569252	TUSC1	Q2TAM9	212 aa		12.85	□□□□□ -0.35
USB1-215	ENST00000569252	DHRS7B	Q6IAN0	325 aa	Predicted RBP	12.85	□□□□□ -0.35
USB1-215	ENST00000569252	TCTEX1D1	Q8N7M0	179 aa		12.85	□□□□□ -0.35
USB1-215	ENST00000569252	ZDHHC22	Q8N966	263 aa		12.85	□□□□□ -0.35
USB1-215	ENST00000569252	OR8H1	Q8NGG4	311 aa		12.85	□□□□□ -0.35
USB1-215	ENST00000569252	OR51H1	Q8NH63	302 aa		12.85	□□□□□ -0.35
USB1-215	ENST00000569252	OR4S2	Q8NH73	311 aa		12.85	□□□□□ -0.35
USB1-215	ENST00000569252	PIFO	Q8TCI5	191 aa		12.85	□□□□□ -0.35
USB1-215	ENST00000569252	EAF1	Q96JC9	268 aa	Predicted RBP	12.85	□□□□□ -0.35
USB1-215	ENST00000569252	SLC2A9	Q9NRM0	540 aa		12.85	□□□□□ -0.35
USB1-215	ENST00000569252	LIN7C	Q9NUP9	197 aa	Known RBP	12.85	□□□□□ -0.35
USB1-215	ENST00000569252	KIAA1456	Q9P272	454 aa		12.85	□□□□□ -0.35
USB1-215	ENST00000569252	GPR132	Q9UNW8	380 aa		12.85	□□□□□ -0.35
USB1-215	ENST00000569252		A6NDX4	124 aa		12.84	□□□□□ -0.35
USB1-215	ENST00000569252		M0QZK8	103 aa		12.84	□□□□□ -0.35
USB1-215	ENST00000569252	SHOX	O15266	292 aa		12.84	□□□□□ -0.35
USB1-215	ENST00000569252	MPPED1	O15442	326 aa		12.84	□□□□□ -0.35
USB1-215	ENST00000569252	PLA2G10	O15496	165 aa		12.84	□□□□□ -0.35
USB1-215	ENST00000569252	PI3	P19957	117 aa		12.84	□□□□□ -0.35
USB1-215	ENST00000569252	CCR6	P51684	374 aa		12.84	□□□□□ -0.35
USB1-215	ENST00000569252	ASAH1	Q13510	395 aa		12.84	□□□□□ -0.35
USB1-215	ENST00000569252	EBI3	Q14213	229 aa		12.84	□□□□□ -0.35
USB1-215	ENST00000569252	TMED4	Q7Z7H5	227 aa		12.84	□□□□□ -0.35
USB1-215	ENST00000569252	TBC1D26	Q86UD7	250 aa		12.84	□□□□□ -0.35
USB1-215	ENST00000569252	TMEM219	Q86XT9	240 aa		12.84	□□□□□ -0.35
USB1-215	ENST00000569252	SGPP2	Q8IWX5	399 aa		12.84	□□□□□ -0.35
USB1-215	ENST00000569252	SPAG16	Q8N0X2	631 aa		12.84	□□□□□ -0.35
USB1-215	ENST00000569252	ENKUR	Q8TC29	256 aa		12.84	□□□□□ -0.35
USB1-215	ENST00000569252	RBM14	Q96PK6	669 aa	Known RBP	12.84	□□□□□ -0.35
USB1-215	ENST00000569252	TSNAX	Q99598	290 aa	Known RBP	12.84	□□□□□ -0.35
USB1-215	ENST00000569252	SLC25A33	Q9BSK2	321 aa		12.84	□□□□□ -0.35
USB1-215	ENST00000569252	CHIA	Q9BZP6	476 aa		12.84	□□□□□ -0.35
USB1-215	ENST00000569252	CMYA5	Q8N3K9	4069 aa		12.84	□□□□□ -0.35
USB1-215	ENST00000569252	LINC00473	A8K010	186 aa		12.83	□□□□□ -0.36
USB1-215	ENST00000569252	B3GALNT1	O75752	331 aa		12.83	□□□□□ -0.36
USB1-215	ENST00000569252	OR2F2	O95006	317 aa		12.83	□□□□□ -0.36
USB1-215	ENST00000569252	SERPINE2	P07093	398 aa		12.83	□□□□□ -0.36
USB1-215	ENST00000569252	RNASE1	P07998	156 aa	Known RBP	12.83	□□□□□ -0.36
USB1-215	ENST00000569252	ANXA3	P12429	323 aa		12.83	□□□□□ -0.36
USB1-215	ENST00000569252	AKR1C4	P17516	323 aa		12.83	□□□□□ -0.36
USB1-215	ENST00000569252	LGALS7	P47929	136 aa		12.83	□□□□□ -0.36
USB1-215	ENST00000569252	LINC00205	P59089	165 aa		12.83	□□□□□ -0.36
USB1-215	ENST00000569252	RND3	P61587	244 aa		12.83	□□□□□ -0.36
USB1-215	ENST00000569252	UBA52	P62987	128 aa	Known RBP	12.83	□□□□□ -0.36
USB1-215	ENST00000569252	PLGLA	Q15195	96 aa		12.83	□□□□□ -0.36
USB1-215	ENST00000569252	OR2B11	Q5JQS5	317 aa		12.83	□□□□□ -0.36
USB1-215	ENST00000569252	C5orf30	Q96GV9	206 aa		12.83	□□□□□ -0.36
USB1-215	ENST00000569252	RASL11B	Q9BPW5	248 aa		12.83	□□□□□ -0.36
USB1-215	ENST00000569252	PEX14	O75381	377 aa		12.82	□□□□□ -0.36
USB1-215	ENST00000569252	NDUFB6	O95139	128 aa		12.82	□□□□□ -0.36
USB1-215	ENST00000569252	CRYZL1	O95825	349 aa		12.82	□□□□□ -0.36
USB1-215	ENST00000569252	HRAS	P01112	189 aa		12.82	□□□□□ -0.36
USB1-215	ENST00000569252	F2R	P25116	425 aa		12.82	□□□□□ -0.36
USB1-215	ENST00000569252	TAS2R31	P59538	309 aa		12.82	□□□□□ -0.36
USB1-215	ENST00000569252	RPL15	P61313	204 aa	Known RBP	12.82	□□□□□ -0.36
USB1-215	ENST00000569252	RPL30	P62888	115 aa	Known RBP	12.82	□□□□□ -0.36
USB1-215	ENST00000569252	MMD	Q15546	238 aa		12.82	□□□□□ -0.36
USB1-215	ENST00000569252	OSR1	Q8TAX0	266 aa	Predicted RBP	12.82	□□□□□ -0.36
USB1-215	ENST00000569252	GPHA2	Q96T91	129 aa		12.82	□□□□□ -0.36
USB1-215	ENST00000569252	RTBDN	Q9BSG5	229 aa	Predicted RBP	12.82	□□□□□ -0.36
USB1-215	ENST00000569252	C5orf66	Q9H5L9	145 aa		12.82	□□□□□ -0.36
USB1-215	ENST00000569252	ESM1	Q9NQ30	184 aa		12.82	□□□□□ -0.36
USB1-215	ENST00000569252	MOB4	Q9Y3A3	225 aa		12.82	□□□□□ -0.36
USB1-215	ENST00000569252	C3orf85	A0A1B0GTC6	90 aa		12.81	□□□□□ -0.36
USB1-215	ENST00000569252	GPR137B	O60478	399 aa		12.81	□□□□□ -0.36
USB1-215	ENST00000569252	ATG12	O94817	140 aa		12.81	□□□□□ -0.36
USB1-215	ENST00000569252	HPRT1	P00492	218 aa		12.81	□□□□□ -0.36
USB1-215	ENST00000569252	EIF4EBP1	Q13541	118 aa	Predicted RBP	12.81	□□□□□ -0.36
USB1-215	ENST00000569252	ARSJ	Q5FYB0	599 aa	Predicted RBP	12.81	□□□□□ -0.36
USB1-215	ENST00000569252	CENPS	Q8N2Z9	138 aa		12.81	□□□□□ -0.36
USB1-215	ENST00000569252	C3orf56	Q8N813	242 aa		12.81	□□□□□ -0.36
USB1-215	ENST00000569252	ZFAND2B	Q8WV99	257 aa		12.81	□□□□□ -0.36
USB1-215	ENST00000569252	DDB2	Q92466	427 aa		12.81	□□□□□ -0.36
USB1-215	ENST00000569252	HARBI1	Q96MB7	349 aa		12.81	□□□□□ -0.36
USB1-215	ENST00000569252	NPFFR1	Q9GZQ6	430 aa		12.81	□□□□□ -0.36
USB1-215	ENST00000569252	PALMD	Q9NP74	551 aa		12.81	□□□□□ -0.36
USB1-215	ENST00000569252	VSIG4	Q9Y279	399 aa		12.81	□□□□□ -0.36
USB1-215	ENST00000569252	PIGBOS1	A0A0B4J2F0	54 aa		12.8	□□□□□ -0.36
USB1-215	ENST00000569252	FAM181B	A6NEQ2	426 aa		12.8	□□□□□ -0.36
USB1-215	ENST00000569252	NBR2	O15453	112 aa		12.8	□□□□□ -0.36
USB1-215	ENST00000569252	RBFOX2	O43251	390 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
USB1-215	ENST00000569252	IGKV1-16	P04430	117 aa		12.8	□□□□□ -0.36
USB1-215	ENST00000569252	ERVK-16	P61578	105 aa		12.8	□□□□□ -0.36
USB1-215	ENST00000569252	DHODH	Q02127	395 aa		12.8	□□□□□ -0.36
USB1-215	ENST00000569252	DCTN2	Q13561	401 aa	Known RBP	12.8	□□□□□ -0.36
USB1-215	ENST00000569252	TRIM16L	Q309B1	348 aa		12.8	□□□□□ -0.36
USB1-215	ENST00000569252	VMA21	Q3ZAQ7	101 aa		12.8	□□□□□ -0.36
USB1-215	ENST00000569252	TMEM177	Q53S58	311 aa		12.8	□□□□□ -0.36
USB1-215	ENST00000569252	CCBE1	Q6UXH8	406 aa	Predicted RBP	12.8	□□□□□ -0.36
USB1-215	ENST00000569252	TAF15	Q92804	592 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
USB1-215	ENST00000569252	MRGPRF	Q96AM1	343 aa		12.8	□□□□□ -0.36
USB1-215	ENST00000569252	NAA60	Q9H7X0	242 aa		12.8	□□□□□ -0.36
USB1-215	ENST00000569252	FAM212B	Q9NTI7	297 aa	Predicted RBP	12.8	□□□□□ -0.36
USB1-215	ENST00000569252	TBC1D24	Q9ULP9	559 aa		12.8	□□□□□ -0.36
USB1-215	ENST00000569252	PRKDC	P78527	4128 aa	Known RBP	12.79	□□□□□ -0.36
USB1-215	ENST00000569252		H0Y980	276 aa		12.79	□□□□□ -0.36
USB1-215	ENST00000569252	FGF16	O43320	207 aa		12.79	□□□□□ -0.36
USB1-215	ENST00000569252	TCRB	P04435	133 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms