RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 KIF26AQ9ULI4 1882 aaPredicted RBP4.42□□□□□ -1.7
SMG1-211ENST00000565324 SOCS1O15524 211 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 INSL4Q14641 139 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 THSD4Q6ZMP0 1018 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 RAX2Q96IS3 184 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 SLC25A2Q9BXI2 301 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 MRPS18AQ9NVS2 196 aaKnown RBP4.42□□□□□ -1.7
SMG1-211ENST00000565324 IL36RNQ9UBH0 155 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 GGTLC3B5MD39 225 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 TNFSF15O95150 251 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 CRPP02741 224 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 ISG15P05161 165 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 GAGE2BQ13066 116 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 GAGE2EQ4V326 116 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 SPEM1Q8N4L4 309 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 GAGE2DQ9UEU5 116 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 TINAGQ9UJW2 476 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 CLDN14O95500 239 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 TNFRSF9Q07011 255 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 LAMTOR2Q9Y2Q5 125 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 DOCK4Q8N1I0 1966 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.42□□□□□ -1.7
SMG1-211ENST00000565324 ASAH2BP0C7U1 165 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 CXCL2P19875 107 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 FSCN3Q9NQT6 498 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 TMEM160Q9NX00 188 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 TRAV8-6A0A0B4J262 113 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 F12P00748 615 aaPredicted RBP4.42□□□□□ -1.7
SMG1-211ENST00000565324 CD8AP01732 235 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 IRF3Q14653 427 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 MMDQ15546 238 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 BIVMQ86UB2 503 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 IL36BQ9NZH7 164 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 DOCK3Q8IZD9 2030 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 GREB1Q4ZG55 1949 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 VSIG8P0DPA2 414 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 NUTF2P61970 127 aaKnown RBP4.42□□□□□ -1.7
SMG1-211ENST00000565324 ALKBH6Q3KRA9 238 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 PIGYQ3MUY2 71 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 RNFT1Q5M7Z0 435 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 KLHDC9Q8NEP7 349 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 SRSF12Q8WXF0 261 aaKnown RBP4.42□□□□□ -1.7
SMG1-211ENST00000565324 SMIM8Q96KF7 97 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 SLC25A10Q9UBX3 287 aaPredicted RBP4.42□□□□□ -1.7
SMG1-211ENST00000565324 H0Y8X5 98 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 HOXD4P09016 255 aaPredicted RBP4.42□□□□□ -1.7
SMG1-211ENST00000565324 MFAP4P55083 255 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 SAXO1Q8IYX7 474 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 SHISA5Q8N114 240 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 TUBA4BQ9H853 241 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 NDUFA2O43678 99 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 TMIGD3P0DMS9 266 aaPredicted RBP4.41□□□□□ -1.7
SMG1-211ENST00000565324 LDLRAD2Q5SZI1 272 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 TMEM91Q6ZNR0 172 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 OR52M1Q8NGK5 317 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 WFDC5Q8TCV5 224 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 TNFRSF12AQ9NP84 129 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 GPX1P07203 203 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 ZNF124Q15973 351 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 AURKAIP1Q9NWT8 199 aaPredicted RBP4.41□□□□□ -1.7
SMG1-211ENST00000565324 KLK13Q9UKR3 277 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 CASP8AP2Q9UKL3 1982 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 SNAI3Q3KNW1 292 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 FAM106AQ4KMX7 169 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 ZNF562Q6V9R5 426 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 GATAD1Q8WUU5 269 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 PATE1Q8WXA2 126 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 IMMP2LQ96T52 175 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 PRSS27Q9BQR3 290 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 CEACAM5P06731 702 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 PSG6Q00889 435 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 DEFB109BQ30KR1 87 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 GAGE13Q4V321 117 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 Q6ZNB5 142 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 VSTM2LQ96N03 204 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 PPP1R3EQ9H7J1 279 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 TMPRSS3P57727 454 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 FGF12P61328 243 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 MGAT2Q10469 447 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 ATXN8Q156A1 80 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 TBR1Q16650 682 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 ZNF658BQ4V348 819 aaPredicted RBP4.41□□□□□ -1.7
SMG1-211ENST00000565324 WIPI1Q5MNZ9 446 aaPredicted RBP4.41□□□□□ -1.7
SMG1-211ENST00000565324 TMEM86BQ8N661 226 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 SCGB3A1Q96QR1 104 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 SIPA1L3O60292 1781 aaPredicted RBP4.41□□□□□ -1.7
SMG1-211ENST00000565324 MARCH11A6NNE9 402 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 RND3P61587 244 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 PLPPR1Q8TBJ4 325 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 NDUFAF3Q9BU61 184 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 NXT2Q9NPJ8 142 aaKnown RBP4.41□□□□□ -1.7
SMG1-211ENST00000565324 KLK2P20151 261 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 ZNF56Q15929 161 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 TMEM249Q2WGJ8 235 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 TMEM252Q8N6L7 170 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 XIRP1Q702N8 1843 aaKnown RBP4.41□□□□□ -1.7
SMG1-211ENST00000565324 NPIPB4C9JG80 1138 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 CDC42EP2O14613 210 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 CEACAM21Q3KPI0 293 aa4.41□□□□□ -1.7
SMG1-211ENST00000565324 ACER2Q5QJU3 275 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms