RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 MC5RP33032 325 aa10.65□□□□□ -0.7
VPS9D1-204ENST00000565023 CHRNA7P36544 502 aa10.65□□□□□ -0.7
VPS9D1-204ENST00000565023 ARPC4P59998 168 aa10.65□□□□□ -0.7
VPS9D1-204ENST00000565023 LAX1Q8IWV1 398 aa10.65□□□□□ -0.7
VPS9D1-204ENST00000565023 OR5AP2Q8NGF4 316 aa10.65□□□□□ -0.7
VPS9D1-204ENST00000565023 OR5AN1Q8NGI8 311 aa10.65□□□□□ -0.7
VPS9D1-204ENST00000565023 DPF1Q92782 380 aa10.65□□□□□ -0.7
VPS9D1-204ENST00000565023 P2RX4Q99571 388 aa10.65□□□□□ -0.7
VPS9D1-204ENST00000565023 FAM103A1Q9BTL3 118 aaKnown RBP10.65□□□□□ -0.7
VPS9D1-204ENST00000565023 NXF2Q9GZY0 626 aaKnown RBP10.65□□□□□ -0.7
VPS9D1-204ENST00000565023 KLK15Q9H2R5 256 aa10.65□□□□□ -0.7
VPS9D1-204ENST00000565023 IFT46Q9NQC8 304 aa10.65□□□□□ -0.7
VPS9D1-204ENST00000565023 SLC35D1Q9NTN3 355 aa10.65□□□□□ -0.7
VPS9D1-204ENST00000565023 SDHAF2Q9NX18 166 aa10.65□□□□□ -0.7
VPS9D1-204ENST00000565023 METTL1Q9UBP6 276 aaKnown RBP10.65□□□□□ -0.7
VPS9D1-204ENST00000565023 EXTL2Q9UBQ6 330 aa10.65□□□□□ -0.7
VPS9D1-204ENST00000565023 FBXO7Q9Y3I1 522 aa10.65□□□□□ -0.7
VPS9D1-204ENST00000565023 OR2W1Q9Y3N9 320 aa10.65□□□□□ -0.7
VPS9D1-204ENST00000565023 SULT1C2O00338 296 aa10.64□□□□□ -0.71
VPS9D1-204ENST00000565023 RGS5O15539 181 aa10.64□□□□□ -0.71
VPS9D1-204ENST00000565023 DUS4LO95620 317 aaKnown RBP10.64□□□□□ -0.71
VPS9D1-204ENST00000565023 FCER2P06734 321 aa10.64□□□□□ -0.71
VPS9D1-204ENST00000565023 KRTAP10-11P60412 298 aa10.64□□□□□ -0.71
VPS9D1-204ENST00000565023 CX3CL1P78423 397 aa10.64□□□□□ -0.71
VPS9D1-204ENST00000565023 SNX29P2Q8IUI4 249 aa10.64□□□□□ -0.71
VPS9D1-204ENST00000565023 C5orf30Q96GV9 206 aa10.64□□□□□ -0.71
VPS9D1-204ENST00000565023 GNB4Q9HAV0 340 aa10.64□□□□□ -0.71
VPS9D1-204ENST00000565023 SLC25A17O43808 307 aa10.63□□□□□ -0.71
VPS9D1-204ENST00000565023 RBBP9O75884 186 aa10.63□□□□□ -0.71
VPS9D1-204ENST00000565023 CA2P00918 260 aa10.63□□□□□ -0.71
VPS9D1-204ENST00000565023 IGKV1-16P04430 117 aa10.63□□□□□ -0.71
VPS9D1-204ENST00000565023 PSMB8P28062 276 aa10.63□□□□□ -0.71
VPS9D1-204ENST00000565023 PPIFP30405 207 aaKnown RBP10.63□□□□□ -0.71
VPS9D1-204ENST00000565023 SLC6A1P30531 599 aa10.63□□□□□ -0.71
VPS9D1-204ENST00000565023 CDX1P47902 265 aaPredicted RBP10.63□□□□□ -0.71
VPS9D1-204ENST00000565023 LUMP51884 338 aaPredicted RBP10.63□□□□□ -0.71
VPS9D1-204ENST00000565023 GNB1P62873 340 aa10.63□□□□□ -0.71
VPS9D1-204ENST00000565023 CDK10Q15131 360 aa10.63□□□□□ -0.71
VPS9D1-204ENST00000565023 PSG5Q15238 335 aa10.63□□□□□ -0.71
VPS9D1-204ENST00000565023 DEFB121Q5J5C9 76 aa10.63□□□□□ -0.71
VPS9D1-204ENST00000565023 C15orf40Q8WUR7 153 aa10.63□□□□□ -0.71
VPS9D1-204ENST00000565023 ABHD1Q96SE0 405 aa10.63□□□□□ -0.71
VPS9D1-204ENST00000565023 TPSG1Q9NRR2 321 aa10.63□□□□□ -0.71
VPS9D1-204ENST00000565023 IGKV1D-13A0A0B4J2D9 117 aa10.62□□□□□ -0.71
VPS9D1-204ENST00000565023 WI2-2373I1.2A0A1W2PRP0 233 aa10.62□□□□□ -0.71
VPS9D1-204ENST00000565023 K7EIL1 84 aa10.62□□□□□ -0.71
VPS9D1-204ENST00000565023 IGKV1-13P0DP09 117 aa10.62□□□□□ -0.71
VPS9D1-204ENST00000565023 FCGR2CP31995 323 aa10.62□□□□□ -0.71
VPS9D1-204ENST00000565023 TAS2R46P59540 309 aa10.62□□□□□ -0.71
VPS9D1-204ENST00000565023 ZNF660Q6AZW8 331 aaPredicted RBP10.62□□□□□ -0.71
VPS9D1-204ENST00000565023 UNQ5815/PRO19632Q6UWF5 114 aa10.62□□□□□ -0.71
VPS9D1-204ENST00000565023 OVCH2Q7RTZ1 564 aa10.62□□□□□ -0.71
VPS9D1-204ENST00000565023 PPP1R27Q86WC6 154 aa10.62□□□□□ -0.71
VPS9D1-204ENST00000565023 PDPNQ86YL7 162 aa10.62□□□□□ -0.71
VPS9D1-204ENST00000565023 LYSMD2Q8IV50 215 aa10.62□□□□□ -0.71
VPS9D1-204ENST00000565023 RNF152Q8N8N0 203 aa10.62□□□□□ -0.71
VPS9D1-204ENST00000565023 BVESQ8NE79 360 aa10.62□□□□□ -0.71
VPS9D1-204ENST00000565023 OR11H1Q8NG94 326 aa10.62□□□□□ -0.71
VPS9D1-204ENST00000565023 MCFD2Q8NI22 146 aa10.62□□□□□ -0.71
VPS9D1-204ENST00000565023 GRPEL2Q8TAA5 225 aa10.62□□□□□ -0.71
VPS9D1-204ENST00000565023 C4orf3Q8WVX3 66 aa10.62□□□□□ -0.71
VPS9D1-204ENST00000565023 GIMAP1Q8WWP7 306 aa10.62□□□□□ -0.71
VPS9D1-204ENST00000565023 FLYWCH2Q96CP2 140 aaKnown RBP10.62□□□□□ -0.71
VPS9D1-204ENST00000565023 MS4A10Q96PG2 267 aa10.62□□□□□ -0.71
VPS9D1-204ENST00000565023 TSNAXQ99598 290 aaKnown RBP10.62□□□□□ -0.71
VPS9D1-204ENST00000565023 MCRIP2Q9BUT9 160 aaKnown RBP10.62□□□□□ -0.71
VPS9D1-204ENST00000565023 C6orf62Q9GZU0 229 aaPredicted RBP10.62□□□□□ -0.71
VPS9D1-204ENST00000565023 ALX4Q9H161 411 aaPredicted RBP10.62□□□□□ -0.71
VPS9D1-204ENST00000565023 SOX15O60248 233 aa10.61□□□□□ -0.71
VPS9D1-204ENST00000565023 SLC22A5O76082 557 aa10.61□□□□□ -0.71
VPS9D1-204ENST00000565023 IGLV2-14P01704 120 aa10.61□□□□□ -0.71
VPS9D1-204ENST00000565023 AADACP22760 399 aa10.61□□□□□ -0.71
VPS9D1-204ENST00000565023 RCVRNP35243 200 aa10.61□□□□□ -0.71
VPS9D1-204ENST00000565023 RFX2P48378 723 aa10.61□□□□□ -0.71
VPS9D1-204ENST00000565023 RAB9AP51151 201 aa10.61□□□□□ -0.71
VPS9D1-204ENST00000565023 DYRK1AQ13627 763 aa10.61□□□□□ -0.71
VPS9D1-204ENST00000565023 DHRS11Q6UWP2 260 aa10.61□□□□□ -0.71
VPS9D1-204ENST00000565023 ZNF645Q8N7E2 425 aa10.61□□□□□ -0.71
VPS9D1-204ENST00000565023 ZNF491Q8N8L2 437 aa10.61□□□□□ -0.71
VPS9D1-204ENST00000565023 LFNGQ8NES3 379 aa10.61□□□□□ -0.71
VPS9D1-204ENST00000565023 OR5M8Q8NGP6 311 aa10.61□□□□□ -0.71
VPS9D1-204ENST00000565023 DIRAS2Q96HU8 199 aa10.61□□□□□ -0.71
VPS9D1-204ENST00000565023 HARBI1Q96MB7 349 aa10.61□□□□□ -0.71
VPS9D1-204ENST00000565023 DCUN1D5Q9BTE7 237 aa10.61□□□□□ -0.71
VPS9D1-204ENST00000565023 GPR61Q9BZJ8 451 aa10.61□□□□□ -0.71
VPS9D1-204ENST00000565023 NDUFA13Q9P0J0 144 aa10.61□□□□□ -0.71
VPS9D1-204ENST00000565023 RABL2AQ9UBK7 228 aaPredicted RBP10.61□□□□□ -0.71
VPS9D1-204ENST00000565023 ZNF580Q9UK33 172 aa10.61□□□□□ -0.71
VPS9D1-204ENST00000565023 RABL2BQ9UNT1 228 aa10.61□□□□□ -0.71
VPS9D1-204ENST00000565023 FOXA2Q9Y261 457 aaPredicted RBP10.61□□□□□ -0.71
VPS9D1-204ENST00000565023 VSIG4Q9Y279 399 aa10.61□□□□□ -0.71
VPS9D1-204ENST00000565023 DPPA5A6NC42 116 aa10.6□□□□□ -0.71
VPS9D1-204ENST00000565023 SHOXO15266 292 aa10.6□□□□□ -0.71
VPS9D1-204ENST00000565023 CNIH1O95406 144 aa10.6□□□□□ -0.71
VPS9D1-204ENST00000565023 PPYP01298 95 aa10.6□□□□□ -0.71
VPS9D1-204ENST00000565023 IGLV1-40P01703 118 aa10.6□□□□□ -0.71
VPS9D1-204ENST00000565023 IGHV3-11P01762 117 aa10.6□□□□□ -0.71
VPS9D1-204ENST00000565023 PMP2P02689 132 aa10.6□□□□□ -0.71
VPS9D1-204ENST00000565023 EGR2P11161 476 aaPredicted RBP10.6□□□□□ -0.71
VPS9D1-204ENST00000565023 HLA-DMAP28067 261 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms