RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 H7C2Y5 167 aa13.66□□□□□ -0.22
CMTM3-208ENST00000564247 FCGR3BO75015 233 aa13.66□□□□□ -0.22
CMTM3-208ENST00000564247 FBP1P09467 338 aa13.66□□□□□ -0.22
CMTM3-208ENST00000564247 OR5AC1P0C628 307 aa13.66□□□□□ -0.22
CMTM3-208ENST00000564247 RAB13P51153 203 aa13.66□□□□□ -0.22
CMTM3-208ENST00000564247 DHRS2Q13268 280 aa13.66□□□□□ -0.22
CMTM3-208ENST00000564247 SLC9A3R2Q15599 337 aa13.66□□□□□ -0.22
CMTM3-208ENST00000564247 ZNF383Q8NA42 475 aa13.66□□□□□ -0.22
CMTM3-208ENST00000564247 OR5AN1Q8NGI8 311 aa13.66□□□□□ -0.22
CMTM3-208ENST00000564247 ZNF431Q8TF32 576 aaPredicted RBP13.66□□□□□ -0.22
CMTM3-208ENST00000564247 CASTOR1Q8WTX7 329 aa13.66□□□□□ -0.22
CMTM3-208ENST00000564247 JMJD8Q96S16 334 aa13.66□□□□□ -0.22
CMTM3-208ENST00000564247 FAM212BQ9NTI7 297 aaPredicted RBP13.66□□□□□ -0.22
CMTM3-208ENST00000564247 SLC35D1Q9NTN3 355 aa13.66□□□□□ -0.22
CMTM3-208ENST00000564247 A0A0U1RQK1 487 aa13.65□□□□□ -0.22
CMTM3-208ENST00000564247 SNRPGP15A8MWD9 76 aa13.65□□□□□ -0.22
CMTM3-208ENST00000564247 CREBL2O60519 120 aaPredicted RBP13.65□□□□□ -0.22
CMTM3-208ENST00000564247 DUS4LO95620 317 aaKnown RBP13.65□□□□□ -0.22
CMTM3-208ENST00000564247 CD1BP29016 333 aa13.65□□□□□ -0.22
CMTM3-208ENST00000564247 LINC00205P59089 165 aa13.65□□□□□ -0.22
CMTM3-208ENST00000564247 SUPT4H1P63272 117 aaKnown RBP13.65□□□□□ -0.22
CMTM3-208ENST00000564247 SRPXP78539 464 aa13.65□□□□□ -0.22
CMTM3-208ENST00000564247 TATDN3Q17R31 274 aa13.65□□□□□ -0.22
CMTM3-208ENST00000564247 TUSC1Q2TAM9 212 aa13.65□□□□□ -0.22
CMTM3-208ENST00000564247 SP6Q3SY56 376 aa13.65□□□□□ -0.22
CMTM3-208ENST00000564247 OR2B11Q5JQS5 317 aa13.65□□□□□ -0.22
CMTM3-208ENST00000564247 Q6ZNX1 250 aa13.65□□□□□ -0.22
CMTM3-208ENST00000564247 COQ8AQ8NI60 647 aa13.65□□□□□ -0.22
CMTM3-208ENST00000564247 C17orf50Q8WW18 174 aa13.65□□□□□ -0.22
CMTM3-208ENST00000564247 DDB2Q92466 427 aa13.65□□□□□ -0.22
CMTM3-208ENST00000564247 TP53RKQ96S44 253 aa13.65□□□□□ -0.22
CMTM3-208ENST00000564247 PHB2Q99623 299 aa13.65□□□□□ -0.22
CMTM3-208ENST00000564247 SEC22CQ9BRL7 303 aa13.65□□□□□ -0.22
CMTM3-208ENST00000564247 TMEM222Q9H0R3 208 aa13.65□□□□□ -0.22
CMTM3-208ENST00000564247 MEGF9Q9H1U4 602 aa13.65□□□□□ -0.22
CMTM3-208ENST00000564247 WASHC3Q9Y3C0 194 aa13.65□□□□□ -0.22
CMTM3-208ENST00000564247 A0A1W2PPI3 338 aa13.64□□□□□ -0.23
CMTM3-208ENST00000564247 H0YJW9 148 aa13.64□□□□□ -0.23
CMTM3-208ENST00000564247 TIMM23O14925 209 aa13.64□□□□□ -0.23
CMTM3-208ENST00000564247 RBFOX2O43251 390 aaKnown RBP eCLIP13.64□□□□□ -0.23
CMTM3-208ENST00000564247 ATG12O94817 140 aa13.64□□□□□ -0.23
CMTM3-208ENST00000564247 RPA2P15927 270 aa13.64□□□□□ -0.23
CMTM3-208ENST00000564247 LPAR6P43657 344 aa13.64□□□□□ -0.23
CMTM3-208ENST00000564247 TMEM187Q14656 261 aa13.64□□□□□ -0.23
CMTM3-208ENST00000564247 DHRS7BQ6IAN0 325 aaPredicted RBP13.64□□□□□ -0.23
CMTM3-208ENST00000564247 LIAT1Q6ZQX7 453 aa13.64□□□□□ -0.23
CMTM3-208ENST00000564247 C9orf139Q6ZV77 190 aa13.64□□□□□ -0.23
CMTM3-208ENST00000564247 PDPNQ86YL7 162 aa13.64□□□□□ -0.23
CMTM3-208ENST00000564247 ZNF695Q8IW36 515 aa13.64□□□□□ -0.23
CMTM3-208ENST00000564247 LGI3Q8N145 548 aa13.64□□□□□ -0.23
CMTM3-208ENST00000564247 DYNAPQ8N1N2 210 aa13.64□□□□□ -0.23
CMTM3-208ENST00000564247 OR52B4Q8NGK2 314 aa13.64□□□□□ -0.23
CMTM3-208ENST00000564247 OR4S2Q8NH73 311 aa13.64□□□□□ -0.23
CMTM3-208ENST00000564247 GLYATL2Q8WU03 294 aa13.64□□□□□ -0.23
CMTM3-208ENST00000564247 AJUBAQ96IF1 538 aa13.64□□□□□ -0.23
CMTM3-208ENST00000564247 AIFM2Q9BRQ8 373 aa13.64□□□□□ -0.23
CMTM3-208ENST00000564247 IGHV3-72A0A0B4J1Y9 119 aa13.63□□□□□ -0.23
CMTM3-208ENST00000564247 HPRT1P00492 218 aa13.63□□□□□ -0.23
CMTM3-208ENST00000564247 UCP1P25874 307 aa13.63□□□□□ -0.23
CMTM3-208ENST00000564247 C12orf45Q8N5I9 185 aaPredicted RBP13.63□□□□□ -0.23
CMTM3-208ENST00000564247 UXS1Q8NBZ7 420 aa13.63□□□□□ -0.23
CMTM3-208ENST00000564247 C22orf15Q8WYQ4 148 aa13.63□□□□□ -0.23
CMTM3-208ENST00000564247 ZDHHC16Q969W1 377 aa13.63□□□□□ -0.23
CMTM3-208ENST00000564247 FLYWCH2Q96CP2 140 aaKnown RBP13.63□□□□□ -0.23
CMTM3-208ENST00000564247 OR51J1Q9H342 316 aa13.63□□□□□ -0.23
CMTM3-208ENST00000564247 ALG5Q9Y673 324 aa13.63□□□□□ -0.23
CMTM3-208ENST00000564247 ANK2Q01484 3957 aa13.63□□□□□ -0.23
CMTM3-208ENST00000564247 A0A0B4J2A0 478 aa13.62□□□□□ -0.23
CMTM3-208ENST00000564247 SSNA1O43805 119 aa13.62□□□□□ -0.23
CMTM3-208ENST00000564247 CDS2O95674 445 aa13.62□□□□□ -0.23
CMTM3-208ENST00000564247 CRYZL1O95825 349 aa13.62□□□□□ -0.23
CMTM3-208ENST00000564247 FAM106CPP0CH98 169 aa13.62□□□□□ -0.23
CMTM3-208ENST00000564247 RPS16P62249 146 aaKnown RBP13.62□□□□□ -0.23
CMTM3-208ENST00000564247 HABP2Q14520 560 aaPredicted RBP13.62□□□□□ -0.23
CMTM3-208ENST00000564247 THNSL2Q86YJ6 484 aa13.62□□□□□ -0.23
CMTM3-208ENST00000564247 OR4C13Q8NGP0 309 aa13.62□□□□□ -0.23
CMTM3-208ENST00000564247 OR2T10Q8NGZ9 312 aa13.62□□□□□ -0.23
CMTM3-208ENST00000564247 MITD1Q8WV92 249 aa13.62□□□□□ -0.23
CMTM3-208ENST00000564247 IL22RA2Q969J5 263 aa13.62□□□□□ -0.23
CMTM3-208ENST00000564247 TMEM56Q96MV1 263 aa13.62□□□□□ -0.23
CMTM3-208ENST00000564247 PLEKHA2Q9HB19 425 aa13.62□□□□□ -0.23
CMTM3-208ENST00000564247 SHPKQ9UHJ6 478 aa13.62□□□□□ -0.23
CMTM3-208ENST00000564247 TMEM56-RWDD3S4R434 201 aa13.62□□□□□ -0.23
CMTM3-208ENST00000564247 C7orf66A4D0T2 115 aa13.61□□□□□ -0.23
CMTM3-208ENST00000564247 TRIM77I1YAP6 450 aa13.61□□□□□ -0.23
CMTM3-208ENST00000564247 SHOXO15266 292 aa13.61□□□□□ -0.23
CMTM3-208ENST00000564247 RAMP3O60896 148 aa13.61□□□□□ -0.23
CMTM3-208ENST00000564247 HRASP01112 189 aa13.61□□□□□ -0.23
CMTM3-208ENST00000564247 PAX6P26367 422 aa13.61□□□□□ -0.23
CMTM3-208ENST00000564247 LGALS7P47929 136 aa13.61□□□□□ -0.23
CMTM3-208ENST00000564247 DYNLT3P51808 116 aa13.61□□□□□ -0.23
CMTM3-208ENST00000564247 HES1Q14469 280 aa13.61□□□□□ -0.23
CMTM3-208ENST00000564247 AANATQ16613 207 aa13.61□□□□□ -0.23
CMTM3-208ENST00000564247 LRRC75BQ2VPJ9 315 aa13.61□□□□□ -0.23
CMTM3-208ENST00000564247 ANKRD55Q3KP44 614 aa13.61□□□□□ -0.23
CMTM3-208ENST00000564247 ZNF585BQ52M93 769 aa13.61□□□□□ -0.23
CMTM3-208ENST00000564247 TMEM177Q53S58 311 aa13.61□□□□□ -0.23
CMTM3-208ENST00000564247 TMEM268Q5VZI3 342 aa13.61□□□□□ -0.23
CMTM3-208ENST00000564247 RBMS3Q6XE24 437 aaKnown RBP13.61□□□□□ -0.23
CMTM3-208ENST00000564247 SELENOHQ8IZQ5 122 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms