RNA–Protein interactions for RNA: ENST00000563984.1

VPS35-205, Transcript of VPS35, retromer complex component, humanhuman

TSL 2

Gene VPS35, Length 775 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35-205ENST00000563984 RARRES2Q99969 163 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 MRPL32Q9BYC8 188 aaKnown RBP4.15□□□□□ -1.75
VPS35-205ENST00000563984 TCEAL2Q9H3H9 227 aaPredicted RBP4.15□□□□□ -1.75
VPS35-205ENST00000563984 Q9H8V8 135 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 ISG20L2Q9H9L3 353 aaKnown RBP4.15□□□□□ -1.75
VPS35-205ENST00000563984 MEPEQ9NQ76 525 aaPredicted RBP4.15□□□□□ -1.75
VPS35-205ENST00000563984 CA10Q9NS85 328 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 TAS2R5Q9NYW4 299 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 TECRQ9NZ01 308 aaKnown RBP4.15□□□□□ -1.75
VPS35-205ENST00000563984 MDFICQ9P1T7 246 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 Q9UF83 564 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 KLF12Q9Y4X4 402 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 FRMPD3Q5JV73 1810 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 E9PCH4 1651 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 CLTCQ00610 1675 aaKnown RBP4.15□□□□□ -1.75
VPS35-205ENST00000563984 TANC1Q9C0D5 1861 aa4.15□□□□□ -1.75
VPS35-205ENST00000563984 MARF1Q9Y4F3 1742 aaKnown RBP4.15□□□□□ -1.75
VPS35-205ENST00000563984 TIAM1Q13009 1591 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 MYH14Q7Z406 1995 aaKnown RBP4.14□□□□□ -1.75
VPS35-205ENST00000563984 MROH2AA6NES4 1674 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 ZNF142P52746 1687 aaPredicted RBP4.14□□□□□ -1.75
VPS35-205ENST00000563984 A0A087WWC5 75 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 A0A0U1RQV1 116 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 FAM236DA0A1B0GTK5 79 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 K7EP34 96 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 TIMM23O14925 209 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 PLA2G10O15496 165 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 REM1O75628 298 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 CLDN14O95500 239 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 MRPL3P09001 348 aaKnown RBP4.14□□□□□ -1.75
VPS35-205ENST00000563984 LGALS1P09382 135 aaKnown RBP4.14□□□□□ -1.75
VPS35-205ENST00000563984 H2AFZP0C0S5 128 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 SEC11BP0C7V7 166 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 TRGC1P0CF51 173 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 FAM236CP0DP71 79 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 CXCL2P19875 107 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 GPX3P22352 226 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 ZNF83P51522 516 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 ZNF140P52738 457 aaPredicted RBP4.14□□□□□ -1.75
VPS35-205ENST00000563984 RPS4XP62701 263 aaKnown RBP4.14□□□□□ -1.75
VPS35-205ENST00000563984 CATR1Q13166 79 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 C2orf68Q2NKX9 166 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 CEACAM16Q2WEN9 425 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 RAB6CQ53S08 254 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 DCAF12Q5T6F0 453 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 LEG1Q6P5S2 330 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 PRSS41Q7RTY9 318 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 DEFB125Q8N687 156 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 ZFP41Q8N8Y5 198 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 ZDHHC22Q8N966 263 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 ZNF114Q8NC26 417 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 SLC25A40Q8TBP6 338 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 ZNF502Q8TBZ5 544 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 PIFOQ8TCI5 191 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 TSACCQ96A04 125 aaPredicted RBP4.14□□□□□ -1.75
VPS35-205ENST00000563984 ADAT3Q96EY9 351 aaPredicted RBP4.14□□□□□ -1.75
VPS35-205ENST00000563984 YPEL4Q96NS1 127 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 GFI1Q99684 422 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 PITX2Q99697 317 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 MRPL45Q9BRJ2 306 aaKnown RBP4.14□□□□□ -1.75
VPS35-205ENST00000563984 SFXN3Q9BWM7 321 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 PBOV1Q9GZY1 135 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 RAB6CQ9H0N0 254 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 TMEM222Q9H0R3 208 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 UBE2TQ9NPD8 197 aaPredicted RBP4.14□□□□□ -1.75
VPS35-205ENST00000563984 STARD5Q9NSY2 213 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 KLK11Q9UBX7 282 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 CACFD1Q9UGQ2 172 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 TRMT112Q9UI30 125 aaKnown RBP4.14□□□□□ -1.75
VPS35-205ENST00000563984 INSIG2Q9Y5U4 225 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 V9GYH0 126 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 ATG2AQ2TAZ0 1938 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 TRIP11Q15643 1979 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 STRCP1A6NGW2 1772 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 PARP14Q460N5 1801 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 PLIN4Q96Q06 1357 aa4.14□□□□□ -1.75
VPS35-205ENST00000563984 NUP210LQ5VU65 1888 aa4.13□□□□□ -1.75
VPS35-205ENST00000563984 IGHV2-26A0A0B4J1V2 119 aa4.13□□□□□ -1.75
VPS35-205ENST00000563984 TCRBV9S1A1TA0A576 114 aa4.13□□□□□ -1.75
VPS35-205ENST00000563984 TCRBV3S1A0A5B6 114 aa4.13□□□□□ -1.75
VPS35-205ENST00000563984 TMEM202A6NGA9 273 aa4.13□□□□□ -1.75
VPS35-205ENST00000563984 RIIAD1A6NNX1 92 aa4.13□□□□□ -1.75
VPS35-205ENST00000563984 GGTLC3B5MD39 225 aa4.13□□□□□ -1.75
VPS35-205ENST00000563984 TAX1BP3O14907 124 aa4.13□□□□□ -1.75
VPS35-205ENST00000563984 AGPAT2O15120 278 aa4.13□□□□□ -1.75
VPS35-205ENST00000563984 BUB3O43684 328 aa4.13□□□□□ -1.75
VPS35-205ENST00000563984 ZFAND5O76080 213 aa4.13□□□□□ -1.75
VPS35-205ENST00000563984 DPM2O94777 84 aa4.13□□□□□ -1.75
VPS35-205ENST00000563984 SLC2A10O95528 541 aa4.13□□□□□ -1.75
VPS35-205ENST00000563984 CYB5AP00167 134 aa4.13□□□□□ -1.75
VPS35-205ENST00000563984 CA2P00918 260 aa4.13□□□□□ -1.75
VPS35-205ENST00000563984 SFTA3P0C7M3 94 aa4.13□□□□□ -1.75
VPS35-205ENST00000563984 ZNF708P17019 499 aa4.13□□□□□ -1.75
VPS35-205ENST00000563984 SRD5A1P18405 259 aa4.13□□□□□ -1.75
VPS35-205ENST00000563984 GALR1P47211 349 aa4.13□□□□□ -1.75
VPS35-205ENST00000563984 RBM11P57052 281 aaKnown RBP4.13□□□□□ -1.75
VPS35-205ENST00000563984 TAS2R46P59540 309 aa4.13□□□□□ -1.75
VPS35-205ENST00000563984 SP4Q02446 784 aa4.13□□□□□ -1.75
VPS35-205ENST00000563984 LAMTOR4Q0VGL1 99 aa4.13□□□□□ -1.75
VPS35-205ENST00000563984 KLF5Q13887 457 aaPredicted RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms