RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 UBE2ZQ9H832 354 aaPredicted RBP2.93□□□□□ -1.94
LINC01416-201ENST00000563553 ST20Q9HBF5 79 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 SLC39A9Q9NUM3 307 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 PLEKHJ1Q9NW61 149 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 IL36BQ9NZH7 164 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 THAP10Q9P2Z0 257 aaPredicted RBP2.93□□□□□ -1.94
LINC01416-201ENST00000563553 CLN8Q9UBY8 286 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 ZNF391Q9UJN7 358 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 NPIPA1Q9UND3 350 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 RPH3ALQ9UNE2 315 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 UBE2J1Q9Y385 318 aaPredicted RBP2.93□□□□□ -1.94
LINC01416-201ENST00000563553 USP9XQ93008 2570 aaPredicted RBP2.93□□□□□ -1.94
LINC01416-201ENST00000563553 TRAV9-2A0A087WT02 112 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 A0A1B0GV72 72 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 VSTM2BA6NLU5 285 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 INAFM1C9JVW0 142 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 LMX1BO60663 402 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 UTS2O95399 124 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 IGHEP01854 428 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 CD55P08174 381 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 OR10J4P0C629 311 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 CAPZBP47756 277 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 ASCL1P50553 236 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 PAX9P55771 341 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 OR1D5P58170 312 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 RBPJQ06330 500 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 MMDQ15546 238 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 ZNF77Q15935 545 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 ZNF726P1Q15940 193 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 HLA-BQ31612 363 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 TMEM95Q3KNT9 176 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 SNAI3Q3KNW1 292 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 FAM78BQ5VT40 261 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 CST9LP1Q5W188 147 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 STUMQ69YW2 141 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 FIGLAQ6QHK4 219 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 SLC39A11Q8N1S5 342 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 TMEM256Q8N2U0 113 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 ZNF709Q8N972 641 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 OR5D18Q8NGL1 313 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 OR10G8Q8NGN5 311 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 PLPPR1Q8TBJ4 325 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 VN1R17PQ8TDU5 208 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 ST8SIA1Q92185 356 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 PSMF1Q92530 271 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 SF3B5Q9BWJ5 86 aaKnown RBP2.93□□□□□ -1.94
LINC01416-201ENST00000563553 PEF1Q9UBV8 284 aaKnown RBP2.93□□□□□ -1.94
LINC01416-201ENST00000563553 IL19Q9UHD0 177 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 MCTS1Q9ULC4 181 aaKnown RBP2.93□□□□□ -1.94
LINC01416-201ENST00000563553 PSG11Q9UQ72 335 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 RBM7Q9Y580 266 aaKnown RBP2.93□□□□□ -1.94
LINC01416-201ENST00000563553 SCN5AQ14524 2016 aa2.93□□□□□ -1.94
LINC01416-201ENST00000563553 LRRK1Q38SD2 2015 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 TNRC18O15417 2968 aaPredicted RBP2.92□□□□□ -1.94
LINC01416-201ENST00000563553 TMED7-TICAM2A0A0A6YYA0 188 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 A0A0J9YY10 115 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 PRSS47A8MTI9 375 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 C9JCJ5 164 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 TRAPPC2LH3BP13 241 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 CORTO00230 105 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 SLC33A1O00400 549 aaPredicted RBP2.92□□□□□ -1.94
LINC01416-201ENST00000563553 ADAM20O43506 726 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 CD5LO43866 347 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 DHRS3O75911 302 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 SERF1AO75920 110 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 PPYP01298 95 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 TNFP01375 233 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 COX5AP20674 150 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 FKBP2P26885 142 aaKnown RBP2.92□□□□□ -1.94
LINC01416-201ENST00000563553 SRD5A2P31213 254 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 RPS27P42677 84 aaKnown RBP2.92□□□□□ -1.94
LINC01416-201ENST00000563553 OR1D4P47884 311 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 TFPI2P48307 235 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 CLDN15P56746 228 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 MRPS34P82930 218 aaKnown RBP2.92□□□□□ -1.94
LINC01416-201ENST00000563553 RUNX1Q01196 453 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 PAX2Q02962 417 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 ZNF154Q13106 437 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 VAMP3Q15836 100 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 HIST3H3Q16695 136 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 HLA-DRB5Q30154 266 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 MAJINQ3KP22 176 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 DCAF12Q5T6F0 453 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 C16orf54Q6UWD8 224 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 LCN15Q6UWW0 184 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 GTF2H5Q6ZYL4 71 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 H1FNTQ75WM6 255 aaPredicted RBP2.92□□□□□ -1.94
LINC01416-201ENST00000563553 VASH2Q86V25 355 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 BAGE3Q86Y29 109 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 BAGE2Q86Y30 109 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 DEFB125Q8N687 156 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 SCCPDHQ8NBX0 429 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 NECAP1Q8NC96 275 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 OR8B12Q8NGG6 310 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 OR4C3Q8NH37 302 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 OR51E1Q8TCB6 317 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 C11orf40Q8WZ69 217 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 FAM3CQ92520 227 aa2.92□□□□□ -1.94
LINC01416-201ENST00000563553 TAF15Q92804 592 aaKnown RBP eCLIP2.92□□□□□ -1.94
LINC01416-201ENST00000563553 SFRP2Q96HF1 295 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms