RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 VWDEQ8N2E2 1590 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 IGHV1-69-2A0A0G2JMI3 117 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 LOC102725191A0A1B0GVB3 256 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 A0A1W2PNM2 257 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 A6NED7 52 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 OR4C45A6NMZ5 311 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 C9JCJ5 164 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 MRASO14807 208 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 EEF1E1O43324 174 aaKnown RBP0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 RPP14O95059 124 aaKnown RBP0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 CCL3P10147 92 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 ORM2P19652 201 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 RPS12P25398 132 aaKnown RBP0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 CCR7P32248 378 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 OMPP47874 163 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 ZNF140P52738 457 aaPredicted RBP0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 CTBP2P56545 445 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 RBM11P57052 281 aaKnown RBP0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 TMEM33P57088 247 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 ERVS71-1P61550 626 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 DYNLL1P63167 89 aaKnown RBP0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 MRPS15P82914 257 aaKnown RBP0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 TNFAIP6P98066 277 aaPredicted RBP0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 ZNF117Q03924 483 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 JOSD1Q15040 202 aaPredicted RBP0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 LRRC75BQ2VPJ9 315 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 LGALS9BQ3B8N2 356 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 C1orf194Q5T5A4 169 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 C1orf195Q5TG92 126 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 LGALS9CQ6DKI2 356 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 C5orf46Q6UWT4 87 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 ZNF767PQ75MW2 155 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 SCXQ7RTU7 201 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 ATP5L2Q7Z4Y8 100 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 GID4Q8IVV7 300 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 DEFB125Q8N687 156 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 UBL4BQ8N7F7 174 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 CCDC112Q8NEF3 446 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 CLDND2Q8NHS1 167 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 MFSD8Q8NHS3 518 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 SLC35B4Q969S0 331 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 OTUB2Q96DC9 234 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 CCL13Q99616 98 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 XAGE1AQ9HD64 81 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 XPNPEP1Q9NQW7 623 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 SLC2A9Q9NRM0 540 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 FKBP14Q9NWM8 211 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 VPS29Q9UBQ0 182 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 LSM5Q9Y4Y9 91 aaKnown RBP0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 CHD5Q8TDI0 1954 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 ABCC12Q96J65 1359 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 A0A087WUU8 490 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 IGHV3-73A0A0B4J1V6 119 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 A0A1W2PQL4 384 aaPredicted RBP0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 IGSF23A1L1A6 192 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 TMEM235A6NFC5 223 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 C17orf98A8MV24 154 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 G3V3Q6 166 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 H3BPC8 53 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 K7EQS6 105 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 TP53I11O14683 189 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 HAND1O96004 215 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 NPYP01303 97 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 ZNF22P17026 224 aaPredicted RBP0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 CCL1P22362 96 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 HAAOP46952 286 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 LSM6P62312 80 aaKnown RBP0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 POLR2GP62487 172 aaKnown RBP eCLIP0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 CST6Q15828 149 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 FAM201AQ5SY85 155 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 OR10K2Q6IF99 312 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 RASL11AQ6T310 242 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 AMTNQ6UX39 209 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 ALKAL1Q6UXT8 129 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 RASSF6Q6ZTQ3 369 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 SLC51BQ86UW2 128 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 COMMD7Q86VX2 200 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 C1orf174Q8IYL3 243 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 LRRC34Q8IZ02 419 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 SLC22A24Q8N4F4 322 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 TMEM86BQ8N661 226 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 OR11H1Q8NG94 326 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 SMCR5Q8TEV8 140 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 ROPN1LQ96C74 230 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 CHMP6Q96FZ7 201 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 OR8B2Q96RD0 313 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 TLNRD1Q9H1K6 362 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 OR51V1Q9H2C8 321 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 OR51I1Q9H343 314 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 C16orf95Q9H693 158 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 RSL24D1Q9UHA3 163 aaKnown RBP0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 SNX12Q9UMY4 172 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 EVC2Q86UK5 1308 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 DSCAMO60469 2012 aa0.88□□□□□ -2.27
HMGB1P33-201ENST00000563485 FLT4P35916 1363 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 ZNF638Q14966 1978 aaKnown RBP0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 TMED7-TICAM2A0A0A6YYA0 188 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 PQLC2LA1A4F0 135 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 CLDN24A6NM45 220 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms