RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 SLC5A7Q9GZV3 580 aa12.42□□□□□ -0.42
USB1-208ENST00000563207 MOB4Q9Y3A3 225 aa12.42□□□□□ -0.42
USB1-208ENST00000563207 WASHC3Q9Y3C0 194 aa12.42□□□□□ -0.42
USB1-208ENST00000563207 IGHV3-72A0A0B4J1Y9 119 aa12.41□□□□□ -0.42
USB1-208ENST00000563207 H0YJW9 148 aa12.41□□□□□ -0.42
USB1-208ENST00000563207 J3QRK9 145 aa12.41□□□□□ -0.42
USB1-208ENST00000563207 IGLV2-14P01704 120 aa12.41□□□□□ -0.42
USB1-208ENST00000563207 DUTP33316 252 aaKnown RBP12.41□□□□□ -0.42
USB1-208ENST00000563207 VDAC2P45880 294 aaPredicted RBP12.41□□□□□ -0.42
USB1-208ENST00000563207 FXYD4P59646 89 aa12.41□□□□□ -0.42
USB1-208ENST00000563207 CBX3Q13185 183 aa12.41□□□□□ -0.42
USB1-208ENST00000563207 ARSJQ5FYB0 599 aaPredicted RBP12.41□□□□□ -0.42
USB1-208ENST00000563207 PDPNQ86YL7 162 aa12.41□□□□□ -0.42
USB1-208ENST00000563207 Q8N6K4 173 aa12.41□□□□□ -0.42
USB1-208ENST00000563207 ZNF383Q8NA42 475 aa12.41□□□□□ -0.42
USB1-208ENST00000563207 DNAH3Q8TD57 4116 aa12.41□□□□□ -0.42
USB1-208ENST00000563207 S100ZQ8WXG8 99 aa12.41□□□□□ -0.42
USB1-208ENST00000563207 SRRQ9GZT4 340 aa12.41□□□□□ -0.42
USB1-208ENST00000563207 DISC1C4P0D8 188 aa12.4□□□□□ -0.42
USB1-208ENST00000563207 H7C2Y5 167 aa12.4□□□□□ -0.42
USB1-208ENST00000563207 M0QYG6 137 aa12.4□□□□□ -0.42
USB1-208ENST00000563207 FAUP35544 74 aaKnown RBP12.4□□□□□ -0.42
USB1-208ENST00000563207 ECI1P42126 302 aa12.4□□□□□ -0.42
USB1-208ENST00000563207 RTL8BQ17RB0 113 aa12.4□□□□□ -0.42
USB1-208ENST00000563207 ABCA11PQ4W5N1 156 aa12.4□□□□□ -0.42
USB1-208ENST00000563207 LHFPL1Q86WI0 220 aa12.4□□□□□ -0.42
USB1-208ENST00000563207 NDUFA11Q86Y39 141 aa12.4□□□□□ -0.42
USB1-208ENST00000563207 CMTM1Q8IZ96 169 aa12.4□□□□□ -0.42
USB1-208ENST00000563207 DRAXINQ8NBI3 349 aaPredicted RBP12.4□□□□□ -0.42
USB1-208ENST00000563207 BVESQ8NE79 360 aa12.4□□□□□ -0.42
USB1-208ENST00000563207 OR5AU1Q8NGC0 362 aa12.4□□□□□ -0.42
USB1-208ENST00000563207 TERB2Q8NHR7 220 aa12.4□□□□□ -0.42
USB1-208ENST00000563207 TRIM63Q969Q1 353 aa12.4□□□□□ -0.42
USB1-208ENST00000563207 RBMXL1Q96E39 390 aaKnown RBP12.4□□□□□ -0.42
USB1-208ENST00000563207 TINAGL1Q9GZM7 467 aaPredicted RBP12.4□□□□□ -0.42
USB1-208ENST00000563207 CCL28Q9NRJ3 127 aa12.4□□□□□ -0.42
USB1-208ENST00000563207 PRELID3BQ9Y3B1 194 aa12.4□□□□□ -0.42
USB1-208ENST00000563207 PEX14O75381 377 aa12.39□□□□□ -0.43
USB1-208ENST00000563207 S100GP29377 79 aa12.39□□□□□ -0.43
USB1-208ENST00000563207 GNRHRP30968 328 aa12.39□□□□□ -0.43
USB1-208ENST00000563207 CD83Q01151 205 aa12.39□□□□□ -0.43
USB1-208ENST00000563207 EIF4EBP1Q13541 118 aaPredicted RBP12.39□□□□□ -0.43
USB1-208ENST00000563207 HNF4GQ14541 408 aa12.39□□□□□ -0.43
USB1-208ENST00000563207 SLC38A6Q8IZM9 456 aa12.39□□□□□ -0.43
USB1-208ENST00000563207 TOMM5Q8N4H5 51 aa12.39□□□□□ -0.43
USB1-208ENST00000563207 DDB2Q92466 427 aa12.39□□□□□ -0.43
USB1-208ENST00000563207 FLYWCH2Q96CP2 140 aaKnown RBP12.39□□□□□ -0.43
USB1-208ENST00000563207 C5orf30Q96GV9 206 aa12.39□□□□□ -0.43
USB1-208ENST00000563207 PRRT1Q99946 306 aa12.39□□□□□ -0.43
USB1-208ENST00000563207 SLC35D1Q9NTN3 355 aa12.39□□□□□ -0.43
USB1-208ENST00000563207 GPR31O00270 319 aa12.38□□□□□ -0.43
USB1-208ENST00000563207 KIR2DS2P43631 304 aa12.38□□□□□ -0.43
USB1-208ENST00000563207 LGALS7P47929 136 aa12.38□□□□□ -0.43
USB1-208ENST00000563207 CATR1Q13166 79 aa12.38□□□□□ -0.43
USB1-208ENST00000563207 AADACL3Q5VUY0 350 aa12.38□□□□□ -0.43
USB1-208ENST00000563207 GLDNQ6ZMI3 551 aaPredicted RBP12.38□□□□□ -0.43
USB1-208ENST00000563207 ZNF818PQ6ZRF7 136 aa12.38□□□□□ -0.43
USB1-208ENST00000563207 KCTD9Q7L273 389 aa12.38□□□□□ -0.43
USB1-208ENST00000563207 MFSD4AQ8N468 514 aa12.38□□□□□ -0.43
USB1-208ENST00000563207 NPBQ8NG41 125 aa12.38□□□□□ -0.43
USB1-208ENST00000563207 OR4C16Q8NGL9 310 aa12.38□□□□□ -0.43
USB1-208ENST00000563207 ZNF486Q96H40 463 aaPredicted RBP12.38□□□□□ -0.43
USB1-208ENST00000563207 TSNAXQ99598 290 aaKnown RBP12.38□□□□□ -0.43
USB1-208ENST00000563207 AKIP1Q9NQ31 210 aa12.38□□□□□ -0.43
USB1-208ENST00000563207 PLSCR3Q9NRY6 295 aa12.38□□□□□ -0.43
USB1-208ENST00000563207 SLC2A8Q9NY64 477 aa12.38□□□□□ -0.43
USB1-208ENST00000563207 SCP2D1Q9UJQ7 156 aa12.38□□□□□ -0.43
USB1-208ENST00000563207 NCBP2LA6PVI3 153 aaKnown RBP12.37□□□□□ -0.43
USB1-208ENST00000563207 LINC00473A8K010 186 aa12.37□□□□□ -0.43
USB1-208ENST00000563207 ZNF735P0CB33 412 aa12.37□□□□□ -0.43
USB1-208ENST00000563207 IGLL1P15814 213 aa12.37□□□□□ -0.43
USB1-208ENST00000563207 INPP1P49441 399 aa12.37□□□□□ -0.43
USB1-208ENST00000563207 KLF9Q13886 244 aaPredicted RBP12.37□□□□□ -0.43
USB1-208ENST00000563207 MMDQ15546 238 aa12.37□□□□□ -0.43
USB1-208ENST00000563207 TRIQKQ629K1 86 aa12.37□□□□□ -0.43
USB1-208ENST00000563207 CENPVQ7Z7K6 275 aaPredicted RBP12.37□□□□□ -0.43
USB1-208ENST00000563207 TCTEX1D1Q8N7M0 179 aa12.37□□□□□ -0.43
USB1-208ENST00000563207 C5orf56Q8N8D9 126 aa12.37□□□□□ -0.43
USB1-208ENST00000563207 OR4D10Q8NGI6 311 aa12.37□□□□□ -0.43
USB1-208ENST00000563207 ZFAND1Q8TCF1 268 aa12.37□□□□□ -0.43
USB1-208ENST00000563207 RSRP1Q9BUV0 290 aa12.37□□□□□ -0.43
USB1-208ENST00000563207 FXYD6Q9H0Q3 95 aa12.37□□□□□ -0.43
USB1-208ENST00000563207 LIN7CQ9NUP9 197 aaKnown RBP12.37□□□□□ -0.43
USB1-208ENST00000563207 KIAA1456Q9P272 454 aa12.37□□□□□ -0.43
USB1-208ENST00000563207 NOTCH3Q9UM47 2321 aa12.36□□□□□ -0.43
USB1-208ENST00000563207 NBR2O15453 112 aa12.36□□□□□ -0.43
USB1-208ENST00000563207 NDUFA3O95167 84 aa12.36□□□□□ -0.43
USB1-208ENST00000563207 SPDEFO95238 335 aa12.36□□□□□ -0.43
USB1-208ENST00000563207 LINC00205P59089 165 aa12.36□□□□□ -0.43
USB1-208ENST00000563207 RPS16P62249 146 aaKnown RBP12.36□□□□□ -0.43
USB1-208ENST00000563207 SURF2Q15527 256 aaPredicted RBP12.36□□□□□ -0.43
USB1-208ENST00000563207 SCGB2B2Q4G0G5 96 aa12.36□□□□□ -0.43
USB1-208ENST00000563207 TMEM177Q53S58 311 aa12.36□□□□□ -0.43
USB1-208ENST00000563207 C9orf152Q5JTZ5 239 aa12.36□□□□□ -0.43
USB1-208ENST00000563207 FAM71E2Q8N5Q1 922 aa12.36□□□□□ -0.43
USB1-208ENST00000563207 Q8N9W7 124 aa12.36□□□□□ -0.43
USB1-208ENST00000563207 POC5Q8NA72 575 aa12.36□□□□□ -0.43
USB1-208ENST00000563207 OSR1Q8TAX0 266 aaPredicted RBP12.36□□□□□ -0.43
USB1-208ENST00000563207 CD300LFQ8TDQ1 290 aa12.36□□□□□ -0.43
USB1-208ENST00000563207 TCTEX1D2Q8WW35 142 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms