RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 ZNF737O75373 536 aa7.91□□□□□ -1.14
CDH1-205ENST00000562836 KBTBD11O94819 623 aa7.91□□□□□ -1.14
CDH1-205ENST00000562836 CA2P00918 260 aa7.91□□□□□ -1.14
CDH1-205ENST00000562836 ZNF43P17038 809 aa7.91□□□□□ -1.14
CDH1-205ENST00000562836 EDDM3AQ14507 147 aa7.91□□□□□ -1.14
CDH1-205ENST00000562836 ALG10Q5BKT4 473 aa7.91□□□□□ -1.14
CDH1-205ENST00000562836 HFE2Q6ZVN8 426 aa7.91□□□□□ -1.14
CDH1-205ENST00000562836 DOK3Q7L591 496 aa7.91□□□□□ -1.14
CDH1-205ENST00000562836 TMEM86AQ8N2M4 240 aa7.91□□□□□ -1.14
CDH1-205ENST00000562836 C8orf31Q8N9H6 132 aa7.91□□□□□ -1.14
CDH1-205ENST00000562836 DOK4Q8TEW6 326 aa7.91□□□□□ -1.14
CDH1-205ENST00000562836 BORCS7Q96B45 105 aa7.91□□□□□ -1.14
CDH1-205ENST00000562836 VGLL1Q99990 258 aa7.91□□□□□ -1.14
CDH1-205ENST00000562836 LIN7CQ9NUP9 197 aaKnown RBP7.91□□□□□ -1.14
CDH1-205ENST00000562836 EHFQ9NZC4 300 aa7.91□□□□□ -1.14
CDH1-205ENST00000562836 ST6GALNAC2Q9UJ37 374 aa7.91□□□□□ -1.14
CDH1-205ENST00000562836 A0A1W2PR77 199 aa7.9□□□□□ -1.14
CDH1-205ENST00000562836 CELA2AP08217 269 aa7.9□□□□□ -1.14
CDH1-205ENST00000562836 SRD5A1P18405 259 aa7.9□□□□□ -1.14
CDH1-205ENST00000562836 MEOX1P50221 254 aa7.9□□□□□ -1.14
CDH1-205ENST00000562836 TIAL1Q01085 375 aaKnown RBP eCLIP7.9□□□□□ -1.14
CDH1-205ENST00000562836 SAMD5Q5TGI4 173 aa7.9□□□□□ -1.14
CDH1-205ENST00000562836 SLC25A42Q86VD7 318 aa7.9□□□□□ -1.14
CDH1-205ENST00000562836 PPP1R27Q86WC6 154 aa7.9□□□□□ -1.14
CDH1-205ENST00000562836 TP53INP2Q8IXH6 220 aa7.9□□□□□ -1.14
CDH1-205ENST00000562836 ZFP62Q8NB50 900 aaPredicted RBP7.9□□□□□ -1.14
CDH1-205ENST00000562836 RASL10AQ92737 203 aa7.9□□□□□ -1.14
CDH1-205ENST00000562836 AJUBAQ96IF1 538 aa7.9□□□□□ -1.14
CDH1-205ENST00000562836 PRELID3AQ96N28 172 aa7.9□□□□□ -1.14
CDH1-205ENST00000562836 BCL2L10Q9HD36 194 aa7.9□□□□□ -1.14
CDH1-205ENST00000562836 LHX3Q9UBR4 397 aa7.9□□□□□ -1.14
CDH1-205ENST00000562836 KCNS2Q9ULS6 477 aa7.9□□□□□ -1.14
CDH1-205ENST00000562836 ARL2-SNX15V9GYD0 113 aa7.9□□□□□ -1.14
CDH1-205ENST00000562836 BORCS7-ASMTA0A0B4J1R7 106 aa7.9□□□□□ -1.15
CDH1-205ENST00000562836 ZG16O60844 167 aa7.9□□□□□ -1.15
CDH1-205ENST00000562836 PGLYRP1O75594 196 aaPredicted RBP7.9□□□□□ -1.15
CDH1-205ENST00000562836 SLC2A10O95528 541 aa7.9□□□□□ -1.15
CDH1-205ENST00000562836 CXorf1O96002 111 aa7.9□□□□□ -1.15
CDH1-205ENST00000562836 RPL38P63173 70 aaKnown RBP7.9□□□□□ -1.15
CDH1-205ENST00000562836 CT83Q5H943 113 aa7.9□□□□□ -1.15
CDH1-205ENST00000562836 ADGRE4PQ86SQ3 457 aa7.9□□□□□ -1.15
CDH1-205ENST00000562836 HAPLN4Q86UW8 402 aa7.9□□□□□ -1.15
CDH1-205ENST00000562836 CLDND2Q8NHS1 167 aa7.9□□□□□ -1.15
CDH1-205ENST00000562836 C10orf35Q96D05 121 aa7.9□□□□□ -1.15
CDH1-205ENST00000562836 FAM206AQ9NX38 181 aa7.9□□□□□ -1.15
CDH1-205ENST00000562836 TMEM250H0YL14 139 aa7.89□□□□□ -1.15
CDH1-205ENST00000562836 GCM2O75603 506 aaPredicted RBP7.89□□□□□ -1.15
CDH1-205ENST00000562836 CRYAAP02489 173 aa7.89□□□□□ -1.15
CDH1-205ENST00000562836 HIST1H1CP16403 213 aaKnown RBP7.89□□□□□ -1.15
CDH1-205ENST00000562836 CRYBB3P26998 211 aa7.89□□□□□ -1.15
CDH1-205ENST00000562836 ZNF85Q03923 595 aa7.89□□□□□ -1.15
CDH1-205ENST00000562836 RNF44Q7L0R7 432 aa7.89□□□□□ -1.15
CDH1-205ENST00000562836 EXOC3-AS1Q8N2X6 119 aa7.89□□□□□ -1.15
CDH1-205ENST00000562836 GCSAMQ8N6F7 178 aa7.89□□□□□ -1.15
CDH1-205ENST00000562836 TPRX1Q8N7U7 411 aa7.89□□□□□ -1.15
CDH1-205ENST00000562836 ZNRF2Q8NHG8 242 aa7.89□□□□□ -1.15
CDH1-205ENST00000562836 C18orf32Q8TCD1 76 aa7.89□□□□□ -1.15
CDH1-205ENST00000562836 WIPF2Q8TF74 440 aaPredicted RBP7.89□□□□□ -1.15
CDH1-205ENST00000562836 CLDN23Q96B33 292 aa7.89□□□□□ -1.15
CDH1-205ENST00000562836 ATG10Q9H0Y0 220 aa7.89□□□□□ -1.15
CDH1-205ENST00000562836 CD207Q9UJ71 328 aa7.89□□□□□ -1.15
CDH1-205ENST00000562836 TRAV1-2A0A0B4J238 106 aa7.89□□□□□ -1.15
CDH1-205ENST00000562836 FAM90A20PA6NIJ5 464 aa7.89□□□□□ -1.15
CDH1-205ENST00000562836 CRYGDP07320 174 aa7.89□□□□□ -1.15
CDH1-205ENST00000562836 SPEM2Q0P670 501 aa7.89□□□□□ -1.15
CDH1-205ENST00000562836 SLC25A30Q5SVS4 291 aa7.89□□□□□ -1.15
CDH1-205ENST00000562836 C1orf195Q5TG92 126 aa7.89□□□□□ -1.15
CDH1-205ENST00000562836 STHQ8IWL8 128 aa7.89□□□□□ -1.15
CDH1-205ENST00000562836 LRTM2Q8N967 370 aa7.89□□□□□ -1.15
CDH1-205ENST00000562836 LINC01555Q8NAE3 123 aa7.89□□□□□ -1.15
CDH1-205ENST00000562836 GMPPAQ96IJ6 420 aaPredicted RBP7.89□□□□□ -1.15
CDH1-205ENST00000562836 IER3IP1Q9Y5U9 82 aa7.89□□□□□ -1.15
CDH1-205ENST00000562836 ALPK3Q96L96 1907 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 FAM236AA0A1B0GUQ0 79 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 FAM236BA0A1B0GV22 79 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 A0A1B0GX51 115 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 APOMO95445 188 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 EDNRAP25101 427 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 FOXI1Q12951 378 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 TAL2Q16559 108 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 CDO1Q16878 200 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 RPTNQ6XPR3 784 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 DNM1P46Q6ZS02 220 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 FAM19A2Q8N3H0 131 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 TMED7Q9Y3B3 224 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 OOSP1A8MZH6 123 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 HSBP1O75506 76 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 OR2H2O95918 312 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 MYOD1P15172 320 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 RPL27P61353 136 aaKnown RBP7.88□□□□□ -1.15
CDH1-205ENST00000562836 FKBP1CQ5VVH2 108 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 MRPL14Q6P1L8 145 aaKnown RBP7.88□□□□□ -1.15
CDH1-205ENST00000562836 TMEM207Q6UWW9 146 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 SLC25A39Q9BZJ4 359 aaPredicted RBP7.88□□□□□ -1.15
CDH1-205ENST00000562836 PRR13Q9NZ81 148 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 FOXA2Q9Y261 457 aaPredicted RBP7.88□□□□□ -1.15
CDH1-205ENST00000562836 SSC5DA1L4H1 1573 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 A0A1W2PP11 408 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 ARRDC5A6NEK1 342 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 CASTOR2A6NHX0 329 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms