RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 PGA5P0DJD9 388 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 CA7P43166 264 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 MEF2CQ06413 473 aaPredicted RBP6.42□□□□□ -1.38
TCF4-216ENST00000562680 BSPH1Q075Z2 132 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 ATRAIDQ6UW56 229 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 ACP7Q6ZNF0 438 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 FAM89BQ8N5H3 189 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 OR2C3Q8N628 320 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 FAM210BQ96KR6 192 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 CCL13Q99616 98 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 TMPRSS13Q9BYE2 586 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 ACTR3CQ9C0K3 210 aaPredicted RBP6.42□□□□□ -1.38
TCF4-216ENST00000562680 THYN1Q9P016 225 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 NAGKQ9UJ70 344 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 MED12Q93074 2177 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 IGHV3-43A0A0B4J1X8 118 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 IGHV3-43DP0DP04 118 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 CD99P14209 185 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 NPBWR1P48145 328 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 PDLIM4P50479 330 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 TDGF1P3P51864 188 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 TMEM267Q0VDI3 215 aaPredicted RBP6.42□□□□□ -1.38
TCF4-216ENST00000562680 FBLN7Q53RD9 439 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 STUMQ69YW2 141 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 ZNF826PQ6ZT77 177 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 BOD1L2Q8IYS8 172 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 ISOC2Q96AB3 205 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 CABLES2Q9BTV7 478 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 CTDSP1Q9GZU7 261 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 PNRC2Q9NPJ4 139 aaKnown RBP6.42□□□□□ -1.38
TCF4-216ENST00000562680 CALYQ9NYX4 217 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 MMP24Q9Y5R2 645 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 SLC25A15Q9Y619 301 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 COL4A3Q01955 1670 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 DEFB108AA8MXU0 73 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 H2AFB1P0C5Y9 115 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 COX7A1P24310 79 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 SULT1A1P50225 295 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 TVP23CQ96ET8 276 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 NRIP2Q9BQI9 281 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 PCGF1Q9BSM1 259 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 IDI2-AS1Q9NZ38 188 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 IGHV1-18A0A0C4DH31 117 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 SYNGR2O43760 224 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 HPRT1P00492 218 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 NPSP0C0P6 89 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 MIDNQ504T8 468 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 DMRTC2Q8IXT2 367 aaPredicted RBP6.41□□□□□ -1.38
TCF4-216ENST00000562680 ZNF439Q8NDP4 499 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 HDHD3Q9BSH5 251 aaPredicted RBP6.41□□□□□ -1.38
TCF4-216ENST00000562680 OR51I2Q9H344 312 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 TMEM106BQ9NUM4 274 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 HEATR5AQ86XA9 2040 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 IGHV3OR15-7A0A075B7D8 119 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 A6NNC1 897 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 IAPPP10997 89 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 PSMB3P49720 205 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 RAB32Q13637 225 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 FA2HQ7L5A8 372 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 TBX15Q96SF7 602 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 ATP6V0BQ99437 205 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 RSPO3Q9BXY4 272 aaPredicted RBP6.41□□□□□ -1.38
TCF4-216ENST00000562680 MAGT1Q9H0U3 335 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 DOK5Q9P104 306 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 VSIG4Q9Y279 399 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 SRSF6Q13247 344 aaKnown RBP6.41□□□□□ -1.38
TCF4-216ENST00000562680 RNFT1Q5M7Z0 435 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 TMEM42Q69YG0 159 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 ASPHD2Q6ICH7 369 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 CSTL1Q9H114 145 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 FAM90A26D6RGX4 464 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 FOXH1O75593 365 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 GYPAP02724 150 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 CFPP27918 469 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 LAMTOR1Q6IAA8 161 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 FLYWCH2Q96CP2 140 aaKnown RBP6.41□□□□□ -1.38
TCF4-216ENST00000562680 LYZL4Q96KX0 146 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 SOSTQ9BQB4 213 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 SEBOXQ9HB31 216 aaPredicted RBP6.41□□□□□ -1.38
TCF4-216ENST00000562680 ZFHX2Q9C0A1 2572 aaPredicted RBP6.41□□□□□ -1.38
TCF4-216ENST00000562680 SLC25A4P12235 298 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 NPBWR2P48146 333 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 ZNF645Q8N7E2 425 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.41□□□□□ -1.38
TCF4-216ENST00000562680 NUP37Q8NFH4 326 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 LINC01560Q8TB33 94 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 TMED6Q8WW62 240 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 TMEM186Q96B77 213 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 DAZAP1Q96EP5 407 aaKnown RBP6.41□□□□□ -1.38
TCF4-216ENST00000562680 INSIG2Q9Y5U4 225 aa6.41□□□□□ -1.38
TCF4-216ENST00000562680 KCNAB3O43448 404 aa6.4□□□□□ -1.38
TCF4-216ENST00000562680 GAPDHP04406 335 aaKnown RBP6.4□□□□□ -1.38
TCF4-216ENST00000562680 FOXF2Q12947 444 aa6.4□□□□□ -1.38
TCF4-216ENST00000562680 SRSF7Q16629 238 aaKnown RBP eCLIP6.4□□□□□ -1.38
TCF4-216ENST00000562680 STXBP6Q8NFX7 210 aa6.4□□□□□ -1.38
TCF4-216ENST00000562680 SLC25A28Q96A46 364 aa6.4□□□□□ -1.38
TCF4-216ENST00000562680 TMEM147Q9BVK8 224 aa6.4□□□□□ -1.38
TCF4-216ENST00000562680 UQCR10Q9UDW1 63 aa6.4□□□□□ -1.38
TCF4-216ENST00000562680 IGKV1-9A0A0C4DH69 117 aa6.4□□□□□ -1.38
TCF4-216ENST00000562680 HPXP02790 462 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms