RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 S1PR3Q99500 378 aa8.1□□□□□ -1.11
SMG1-205ENST00000561947 EGLN1Q9GZT9 426 aa8.1□□□□□ -1.11
SMG1-205ENST00000561947 SMDT1Q9H4I9 107 aa8.1□□□□□ -1.11
SMG1-205ENST00000561947 LINC00574Q9H8X3 128 aa8.1□□□□□ -1.11
SMG1-205ENST00000561947 PCNX1Q96RV3 2341 aa8.09□□□□□ -1.11
SMG1-205ENST00000561947 TRAV38-1A0A0B4J264 116 aa8.09□□□□□ -1.11
SMG1-205ENST00000561947 UBE2L5PA0A1B0GUS4 154 aa8.09□□□□□ -1.11
SMG1-205ENST00000561947 CEBPZOSA8MTT3 80 aa8.09□□□□□ -1.11
SMG1-205ENST00000561947 SHISA9B4DS77 424 aa8.09□□□□□ -1.11
SMG1-205ENST00000561947 NCMAPQ5T1S8 102 aa8.09□□□□□ -1.11
SMG1-205ENST00000561947 C1orf229Q6ZS94 237 aaPredicted RBP8.09□□□□□ -1.11
SMG1-205ENST00000561947 ZNF439Q8NDP4 499 aa8.09□□□□□ -1.11
SMG1-205ENST00000561947 SFT2D1Q8WV19 159 aa8.09□□□□□ -1.11
SMG1-205ENST00000561947 QTRT1Q9BXR0 403 aaKnown RBP8.09□□□□□ -1.11
SMG1-205ENST00000561947 SLC35B3Q9H1N7 401 aa8.09□□□□□ -1.11
SMG1-205ENST00000561947 SAP30LQ9HAJ7 183 aa8.09□□□□□ -1.11
SMG1-205ENST00000561947 DOCK11Q5JSL3 2073 aa8.09□□□□□ -1.11
SMG1-205ENST00000561947 SAA2-SAA4A0A096LPE2 208 aa8.09□□□□□ -1.11
SMG1-205ENST00000561947 A0A1W2PPE3 182 aa8.09□□□□□ -1.11
SMG1-205ENST00000561947 RBFOX3A6NFN3 312 aa8.09□□□□□ -1.11
SMG1-205ENST00000561947 PMS2P5A8MQ11 134 aa8.09□□□□□ -1.11
SMG1-205ENST00000561947 SAA2P0DJI9 122 aaPredicted RBP8.09□□□□□ -1.11
SMG1-205ENST00000561947 NFYBP25208 207 aa8.09□□□□□ -1.11
SMG1-205ENST00000561947 RAB2AP61019 212 aa8.09□□□□□ -1.11
SMG1-205ENST00000561947 ERVK-16P61578 105 aa8.09□□□□□ -1.11
SMG1-205ENST00000561947 SERF2P84101 59 aa8.09□□□□□ -1.11
SMG1-205ENST00000561947 ATP6V1FQ16864 119 aa8.09□□□□□ -1.11
SMG1-205ENST00000561947 PRAMEF5Q5TYX0 476 aa8.09□□□□□ -1.11
SMG1-205ENST00000561947 DMRTC2Q8IXT2 367 aaPredicted RBP8.09□□□□□ -1.11
SMG1-205ENST00000561947 C1orf87Q8N0U7 546 aa8.09□□□□□ -1.11
SMG1-205ENST00000561947 TAF15Q92804 592 aaKnown RBP eCLIP8.09□□□□□ -1.11
SMG1-205ENST00000561947 RBMXL1Q96E39 390 aaKnown RBP8.09□□□□□ -1.11
SMG1-205ENST00000561947 RARRES2Q99969 163 aa8.09□□□□□ -1.11
SMG1-205ENST00000561947 TMEM147Q9BVK8 224 aa8.09□□□□□ -1.11
SMG1-205ENST00000561947 MAP1BP46821 2468 aaKnown RBP8.09□□□□□ -1.11
SMG1-205ENST00000561947 TRAV1-1A0A0B4J248 108 aa8.08□□□□□ -1.12
SMG1-205ENST00000561947 hADV38S2A0JD32 116 aa8.08□□□□□ -1.12
SMG1-205ENST00000561947 E7EQL1 145 aa8.08□□□□□ -1.12
SMG1-205ENST00000561947 TMEM178BH3BS89 294 aa8.08□□□□□ -1.12
SMG1-205ENST00000561947 TMPRSS2O15393 492 aa8.08□□□□□ -1.12
SMG1-205ENST00000561947 NQO2P16083 231 aa8.08□□□□□ -1.12
SMG1-205ENST00000561947 CASP6P55212 293 aa8.08□□□□□ -1.12
SMG1-205ENST00000561947 OR2B8PP59922 312 aa8.08□□□□□ -1.12
SMG1-205ENST00000561947 SPINK9Q5DT21 86 aa8.08□□□□□ -1.12
SMG1-205ENST00000561947 OR4S2Q8NH73 311 aa8.08□□□□□ -1.12
SMG1-205ENST00000561947 RPRMQ9NS64 109 aa8.08□□□□□ -1.12
SMG1-205ENST00000561947 TIMM9Q9Y5J7 89 aa8.08□□□□□ -1.12
SMG1-205ENST00000561947 PIEZO2Q9H5I5 2752 aa8.08□□□□□ -1.12
SMG1-205ENST00000561947 PPIAL4EA0A075B759 164 aa8.08□□□□□ -1.12
SMG1-205ENST00000561947 PPIAL4DF5H284 164 aa8.08□□□□□ -1.12
SMG1-205ENST00000561947 PPIAL4FP0DN26 164 aa8.08□□□□□ -1.12
SMG1-205ENST00000561947 NDUFB7P17568 137 aa8.08□□□□□ -1.12
SMG1-205ENST00000561947 THBS3P49746 956 aa8.08□□□□□ -1.12
SMG1-205ENST00000561947 SSX9Q7RTT3 188 aa8.08□□□□□ -1.12
SMG1-205ENST00000561947 KDF1Q8NAX2 398 aaPredicted RBP8.08□□□□□ -1.12
SMG1-205ENST00000561947 OR4A16Q8NH70 328 aa8.08□□□□□ -1.12
SMG1-205ENST00000561947 RNASE6Q93091 150 aaKnown RBP8.08□□□□□ -1.12
SMG1-205ENST00000561947 PINX1Q96BK5 328 aaKnown RBP8.08□□□□□ -1.12
SMG1-205ENST00000561947 ZNF251Q9BRH9 671 aa8.08□□□□□ -1.12
SMG1-205ENST00000561947 VSIRQ9H7M9 311 aa8.08□□□□□ -1.12
SMG1-205ENST00000561947 SLC25A10Q9UBX3 287 aaPredicted RBP8.08□□□□□ -1.12
SMG1-205ENST00000561947 RPUSD1Q9UJJ7 312 aaKnown RBP8.08□□□□□ -1.12
SMG1-205ENST00000561947 PPIAL4AQ9Y536 164 aa8.08□□□□□ -1.12
SMG1-205ENST00000561947 LINC00312Q9Y6C7 94 aa8.08□□□□□ -1.12
SMG1-205ENST00000561947 YLPM1P49750 1951 aaKnown RBP8.08□□□□□ -1.12
SMG1-205ENST00000561947 MMP23AO75900 390 aa8.07□□□□□ -1.12
SMG1-205ENST00000561947 LY86O95711 162 aa8.07□□□□□ -1.12
SMG1-205ENST00000561947 CA7P43166 264 aa8.07□□□□□ -1.12
SMG1-205ENST00000561947 GNG10P50151 68 aa8.07□□□□□ -1.12
SMG1-205ENST00000561947 MRPS11P82912 194 aaKnown RBP8.07□□□□□ -1.12
SMG1-205ENST00000561947 TMEM41BQ5BJD5 291 aa8.07□□□□□ -1.12
SMG1-205ENST00000561947 LYG1Q8N1E2 194 aa8.07□□□□□ -1.12
SMG1-205ENST00000561947 OR10P1Q8NGE3 313 aa8.07□□□□□ -1.12
SMG1-205ENST00000561947 OR52E5Q8NH55 327 aa8.07□□□□□ -1.12
SMG1-205ENST00000561947 NEUROG1Q92886 237 aa8.07□□□□□ -1.12
SMG1-205ENST00000561947 ADTRPQ96IZ2 230 aa8.07□□□□□ -1.12
SMG1-205ENST00000561947 DYNLRB1Q9NP97 96 aa8.07□□□□□ -1.12
SMG1-205ENST00000561947 TMEM106BQ9NUM4 274 aa8.07□□□□□ -1.12
SMG1-205ENST00000561947 TET2Q6N021 2002 aaPredicted RBP8.07□□□□□ -1.12
SMG1-205ENST00000561947 IFNA17P01571 189 aa8.07□□□□□ -1.12
SMG1-205ENST00000561947 OR13C7P0DN81 318 aa8.07□□□□□ -1.12
SMG1-205ENST00000561947 SPCS3P61009 180 aa8.07□□□□□ -1.12
SMG1-205ENST00000561947 RELBQ01201 579 aa8.07□□□□□ -1.12
SMG1-205ENST00000561947 MEF2CQ06413 473 aaPredicted RBP8.07□□□□□ -1.12
SMG1-205ENST00000561947 KLRB1Q12918 225 aa8.07□□□□□ -1.12
SMG1-205ENST00000561947 HAGHQ16775 308 aa8.07□□□□□ -1.12
SMG1-205ENST00000561947 ZNF506Q5JVG8 444 aa8.07□□□□□ -1.12
SMG1-205ENST00000561947 CENPVQ7Z7K6 275 aaPredicted RBP8.07□□□□□ -1.12
SMG1-205ENST00000561947 VKORC1L1Q8N0U8 176 aa8.07□□□□□ -1.12
SMG1-205ENST00000561947 CLDND2Q8NHS1 167 aa8.07□□□□□ -1.12
SMG1-205ENST00000561947 MBD3L1Q8WWY6 194 aa8.07□□□□□ -1.12
SMG1-205ENST00000561947 TMEM140Q9NV12 185 aa8.07□□□□□ -1.12
SMG1-205ENST00000561947 NDRG3Q9UGV2 375 aa8.07□□□□□ -1.12
SMG1-205ENST00000561947 C15orf62A8K5M9 175 aa8.06□□□□□ -1.12
SMG1-205ENST00000561947 SCAF4O95104 1147 aaKnown RBP8.06□□□□□ -1.12
SMG1-205ENST00000561947 CD3EP07766 207 aa8.06□□□□□ -1.12
SMG1-205ENST00000561947 GNB2P62879 340 aa8.06□□□□□ -1.12
SMG1-205ENST00000561947 ICAM4Q14773 271 aa8.06□□□□□ -1.12
SMG1-205ENST00000561947 ZNF726P1Q15940 193 aa8.06□□□□□ -1.12
SMG1-205ENST00000561947 VWC2Q2TAL6 325 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms