RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 ZNF705AQ6ZN79 300 aaPredicted RBP0.96□□□□□ -2.26
USP8-218ENST00000561330 RPS19BP1Q86WX3 136 aaKnown RBP0.96□□□□□ -2.26
USP8-218ENST00000561330 ZNF675Q8TD23 568 aa0.96□□□□□ -2.26
USP8-218ENST00000561330 RNASE6Q93091 150 aaKnown RBP0.96□□□□□ -2.26
USP8-218ENST00000561330 C12orf43Q96C57 262 aaKnown RBP0.96□□□□□ -2.26
USP8-218ENST00000561330 TMA16Q96EY4 203 aaKnown RBP0.96□□□□□ -2.26
USP8-218ENST00000561330 MROQ9BYG7 248 aa0.96□□□□□ -2.26
USP8-218ENST00000561330 TTTY13Q9BZ97 58 aa0.96□□□□□ -2.26
USP8-218ENST00000561330 C1orf109Q9NX04 203 aa0.96□□□□□ -2.26
USP8-218ENST00000561330 TIMM9Q9Y5J7 89 aa0.96□□□□□ -2.26
USP8-218ENST00000561330 CCDC88CQ9P219 2028 aa0.96□□□□□ -2.26
USP8-218ENST00000561330 KIAA2026Q5HYC2 2103 aa0.95□□□□□ -2.26
USP8-218ENST00000561330 A0A087WUU8 490 aa0.95□□□□□ -2.26
USP8-218ENST00000561330 OR6C6A6NF89 314 aa0.95□□□□□ -2.26
USP8-218ENST00000561330 MT-CO2P00403 227 aa0.95□□□□□ -2.26
USP8-218ENST00000561330 GRPRP30550 384 aa0.95□□□□□ -2.26
USP8-218ENST00000561330 ETV1P50549 477 aa0.95□□□□□ -2.26
USP8-218ENST00000561330 FXYD7P58549 80 aa0.95□□□□□ -2.26
USP8-218ENST00000561330 TPI1P60174 286 aa0.95□□□□□ -2.26
USP8-218ENST00000561330 HPCAP84074 193 aa0.95□□□□□ -2.26
USP8-218ENST00000561330 ZNHIT3Q15649 155 aaPredicted RBP0.95□□□□□ -2.26
USP8-218ENST00000561330 SLC36A1Q7Z2H8 476 aa0.95□□□□□ -2.26
USP8-218ENST00000561330 PPCDCQ96CD2 204 aa0.95□□□□□ -2.26
USP8-218ENST00000561330 MED10Q9BTT4 135 aa0.95□□□□□ -2.26
USP8-218ENST00000561330 MED9Q9NWA0 146 aa0.95□□□□□ -2.26
USP8-218ENST00000561330 IGHV1-18A0A0C4DH31 117 aa0.94□□□□□ -2.26
USP8-218ENST00000561330 PLA2G10O15496 165 aa0.94□□□□□ -2.26
USP8-218ENST00000561330 PSMB8P28062 276 aa0.94□□□□□ -2.26
USP8-218ENST00000561330 CA5AP35218 305 aa0.94□□□□□ -2.26
USP8-218ENST00000561330 TAS2R20P59543 309 aa0.94□□□□□ -2.26
USP8-218ENST00000561330 AP1S1P61966 158 aa0.94□□□□□ -2.26
USP8-218ENST00000561330 SLAMF1Q13291 335 aa0.94□□□□□ -2.26
USP8-218ENST00000561330 GNA13Q14344 377 aa0.94□□□□□ -2.26
USP8-218ENST00000561330 CDK5R1Q15078 307 aa0.94□□□□□ -2.26
USP8-218ENST00000561330 DNAL1Q4LDG9 190 aa0.94□□□□□ -2.26
USP8-218ENST00000561330 C7orf65Q6ZTY9 151 aa0.94□□□□□ -2.26
USP8-218ENST00000561330 CRLF3Q8IUI8 442 aa0.94□□□□□ -2.26
USP8-218ENST00000561330 OR10D3Q8NH80 312 aa0.94□□□□□ -2.26
USP8-218ENST00000561330 RBP7Q96R05 134 aa0.94□□□□□ -2.26
USP8-218ENST00000561330 ADAT1Q9BUB4 502 aaKnown RBP0.94□□□□□ -2.26
USP8-218ENST00000561330 PCYT1BQ9Y5K3 369 aaPredicted RBP0.94□□□□□ -2.26
USP8-218ENST00000561330 ZFHX2Q9C0A1 2572 aaPredicted RBP0.94□□□□□ -2.26
USP8-218ENST00000561330 DSCAMO60469 2012 aa0.93□□□□□ -2.26
USP8-218ENST00000561330 MKRN2OSH3BPM6 223 aa0.93□□□□□ -2.26
USP8-218ENST00000561330 RPSAP08865 295 aaKnown RBP0.93□□□□□ -2.26
USP8-218ENST00000561330 MIPP30301 263 aa0.93□□□□□ -2.26
USP8-218ENST00000561330 ALDH3A1P30838 453 aa0.93□□□□□ -2.26
USP8-218ENST00000561330 FABP5Q01469 135 aa0.93□□□□□ -2.26
USP8-218ENST00000561330 C4orf26Q17RF5 130 aa0.93□□□□□ -2.26
USP8-218ENST00000561330 MBD3L1Q8WWY6 194 aa0.93□□□□□ -2.26
USP8-218ENST00000561330 IMMP2LQ96T52 175 aa0.93□□□□□ -2.26
USP8-218ENST00000561330 IGKV2D-26A0A0A0MRZ7 120 aa0.92□□□□□ -2.26
USP8-218ENST00000561330 A0A0J9YW62 118 aa0.92□□□□□ -2.26
USP8-218ENST00000561330 F8VZ95 297 aa0.92□□□□□ -2.26
USP8-218ENST00000561330 K7ERQ8 282 aa0.92□□□□□ -2.26
USP8-218ENST00000561330 CCRL2O00421 344 aa0.92□□□□□ -2.26
USP8-218ENST00000561330 YKT6O15498 198 aa0.92□□□□□ -2.26
USP8-218ENST00000561330 CREBL2O60519 120 aaPredicted RBP0.92□□□□□ -2.26
USP8-218ENST00000561330 ADAP1O75689 374 aa0.92□□□□□ -2.26
USP8-218ENST00000561330 ATP6V1G2O95670 118 aa0.92□□□□□ -2.26
USP8-218ENST00000561330 HLA-DQB2P05538 268 aa0.92□□□□□ -2.26
USP8-218ENST00000561330 RD3LP0DJH9 198 aa0.92□□□□□ -2.26
USP8-218ENST00000561330 AQP4P55087 323 aa0.92□□□□□ -2.26
USP8-218ENST00000561330 FKBP1AP62942 108 aaKnown RBP0.92□□□□□ -2.26
USP8-218ENST00000561330 MOGQ16653 247 aa0.92□□□□□ -2.26
USP8-218ENST00000561330 LRRC26Q2I0M4 334 aa0.92□□□□□ -2.26
USP8-218ENST00000561330 HLA-DRB5Q30154 266 aa0.92□□□□□ -2.26
USP8-218ENST00000561330 OR52A5Q9H2C5 316 aa0.92□□□□□ -2.26
USP8-218ENST00000561330 RBM7Q9Y580 266 aaKnown RBP0.92□□□□□ -2.26
USP8-218ENST00000561330 LRPPRCP42704 1394 aaKnown RBP0.92□□□□□ -2.26
USP8-218ENST00000561330 TRAV7A0A075B6U4 112 aa0.91□□□□□ -2.26
USP8-218ENST00000561330 A0A0D9SEW6 157 aa0.91□□□□□ -2.26
USP8-218ENST00000561330 C9JCJ5 164 aa0.91□□□□□ -2.26
USP8-218ENST00000561330 H7C2G1 150 aa0.91□□□□□ -2.26
USP8-218ENST00000561330 AZIN1O14977 448 aa0.91□□□□□ -2.26
USP8-218ENST00000561330 STX10O60499 249 aa0.91□□□□□ -2.26
USP8-218ENST00000561330 LGALS1P09382 135 aaKnown RBP0.91□□□□□ -2.26
USP8-218ENST00000561330 CXCL2P19875 107 aa0.91□□□□□ -2.26
USP8-218ENST00000561330 CTAG1AP78358 180 aa0.91□□□□□ -2.26
USP8-218ENST00000561330 EBPQ15125 230 aaKnown RBP0.91□□□□□ -2.26
USP8-218ENST00000561330 Q1T7F1 81 aa0.91□□□□□ -2.26
USP8-218ENST00000561330 SPERTQ8NA61 448 aa0.91□□□□□ -2.26
USP8-218ENST00000561330 LFNGQ8NES3 379 aa0.91□□□□□ -2.26
USP8-218ENST00000561330 OR5L1Q8NGL2 311 aa0.91□□□□□ -2.26
USP8-218ENST00000561330 TMEM109Q9BVC6 243 aa0.91□□□□□ -2.26
USP8-218ENST00000561330 NSRP1Q9H0G5 558 aaKnown RBP0.91□□□□□ -2.26
USP8-218ENST00000561330 REREQ9P2R6 1566 aa0.91□□□□□ -2.26
USP8-218ENST00000561330 TOX3O15405 576 aaPredicted RBP0.9□□□□□ -2.27
USP8-218ENST00000561330 NEMFO60524 1076 aa0.9□□□□□ -2.27
USP8-218ENST00000561330 CXCL3P19876 107 aa0.9□□□□□ -2.27
USP8-218ENST00000561330 HIST1H4AP62805 103 aaKnown RBP0.9□□□□□ -2.27
USP8-218ENST00000561330 EMX1Q04741 257 aaPredicted RBP0.9□□□□□ -2.27
USP8-218ENST00000561330 AKR1C1Q04828 323 aa0.9□□□□□ -2.27
USP8-218ENST00000561330 ELOBQ15370 118 aa0.9□□□□□ -2.27
USP8-218ENST00000561330 ANGPT1Q15389 498 aa0.9□□□□□ -2.27
USP8-218ENST00000561330 SURF2Q15527 256 aaPredicted RBP0.9□□□□□ -2.27
USP8-218ENST00000561330 LRRC75BQ2VPJ9 315 aa0.9□□□□□ -2.27
USP8-218ENST00000561330 ARHGAP11BQ3KRB8 267 aa0.9□□□□□ -2.27
USP8-218ENST00000561330 GPHB5Q86YW7 130 aa0.9□□□□□ -2.27
USP8-218ENST00000561330 BOD1L2Q8IYS8 172 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms