RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 ZNF585BQ52M93 769 aa4.4□□□□□ -1.71
ZEB1-220ENST00000560909 RPL39P5Q59GN2 51 aa4.4□□□□□ -1.71
ZEB1-220ENST00000560909 TMEM128Q5BJH2 165 aa4.4□□□□□ -1.71
ZEB1-220ENST00000560909 TPTE2P1Q5T6R2 138 aa4.4□□□□□ -1.71
ZEB1-220ENST00000560909 GPR157Q5UAW9 335 aa4.4□□□□□ -1.71
ZEB1-220ENST00000560909 CCBE1Q6UXH8 406 aaPredicted RBP4.4□□□□□ -1.71
ZEB1-220ENST00000560909 Q6ZNX1 250 aa4.4□□□□□ -1.71
ZEB1-220ENST00000560909 THNSL2Q86YJ6 484 aa4.4□□□□□ -1.71
ZEB1-220ENST00000560909 CMTM1Q8IZ96 169 aa4.4□□□□□ -1.71
ZEB1-220ENST00000560909 DYNAPQ8N1N2 210 aa4.4□□□□□ -1.71
ZEB1-220ENST00000560909 LRTM2Q8N967 370 aa4.4□□□□□ -1.71
ZEB1-220ENST00000560909 ZNF383Q8NA42 475 aa4.4□□□□□ -1.71
ZEB1-220ENST00000560909 NANPQ8TBE9 248 aa4.4□□□□□ -1.71
ZEB1-220ENST00000560909 PIFOQ8TCI5 191 aa4.4□□□□□ -1.71
ZEB1-220ENST00000560909 SECTM1Q8WVN6 248 aa4.4□□□□□ -1.71
ZEB1-220ENST00000560909 RTN4IP1Q8WWV3 396 aaPredicted RBP4.4□□□□□ -1.71
ZEB1-220ENST00000560909 CFHR4Q92496 578 aa4.4□□□□□ -1.71
ZEB1-220ENST00000560909 S1PR3Q99500 378 aa4.4□□□□□ -1.71
ZEB1-220ENST00000560909 RNF5Q99942 180 aa4.4□□□□□ -1.71
ZEB1-220ENST00000560909 C20orf85Q9H1P6 137 aa4.4□□□□□ -1.71
ZEB1-220ENST00000560909 OR2D2Q9H210 308 aa4.4□□□□□ -1.71
ZEB1-220ENST00000560909 SLC2A9Q9NRM0 540 aa4.4□□□□□ -1.71
ZEB1-220ENST00000560909 SHPKQ9UHJ6 478 aa4.4□□□□□ -1.71
ZEB1-220ENST00000560909 NUP50Q9UKX7 468 aa4.4□□□□□ -1.71
ZEB1-220ENST00000560909 RNF150Q9ULK6 438 aa4.4□□□□□ -1.71
ZEB1-220ENST00000560909 FLVCR2Q9UPI3 526 aa4.4□□□□□ -1.71
ZEB1-220ENST00000560909 SETD2Q9BYW2 2564 aaPredicted RBP4.39□□□□□ -1.71
ZEB1-220ENST00000560909 A0A0B4J293 547 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 IGHV1-3A0A0C4DH29 117 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 C7orf66A4D0T2 115 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 SNRPGP15A8MWD9 76 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 INMT-MINDY4F8WBC2 141 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 H0Y980 276 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 H0YJW9 148 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 M0R1X1 148 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 HSD17B6O14756 317 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 PRAF2O60831 178 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 PEX14O75381 377 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 CDS2O95674 445 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 IGHV3-7P01780 117 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 ARG1P05089 322 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 P0C879 139 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 RRASP10301 218 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 HLA-GP17693 338 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 UCP1P25874 307 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 IL3RAP26951 378 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 MC5RP33032 325 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 GPR12P47775 334 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 THBS3P49746 956 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 GNG10P50151 68 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 PIGPP57054 158 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 FXYD4P59646 89 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 PRB3Q04118 309 aaPredicted RBP4.39□□□□□ -1.71
ZEB1-220ENST00000560909 BAMBIQ13145 260 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 TMEM187Q14656 261 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 TMEM177Q53S58 311 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 FAM120AOSQ5T036 256 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 DHRS7BQ6IAN0 325 aaPredicted RBP4.39□□□□□ -1.71
ZEB1-220ENST00000560909 CCDC144NLQ6NUI1 221 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 PLET1Q6UQ28 207 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 LHFPL4Q7Z7J7 247 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 TGIF2LXQ8IUE1 241 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 LYG1Q8N1E2 194 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 CENPSQ8N2Z9 138 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 Q8N6K4 173 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 ADAD2Q8NCV1 583 aaKnown RBP4.39□□□□□ -1.71
ZEB1-220ENST00000560909 OR10X1Q8NGY0 326 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 ENKURQ8TC29 256 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 CD300LFQ8TDQ1 290 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 GLYATL2Q8WU03 294 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 MITD1Q8WV92 249 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 C17orf50Q8WW18 174 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 IL22RA2Q969J5 263 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 TOMM40LQ969M1 308 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 TMEM56Q96MV1 263 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 MRPL20Q9BYC9 149 aaKnown RBP4.39□□□□□ -1.71
ZEB1-220ENST00000560909 NAA60Q9H7X0 242 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 NUDT15Q9NV35 164 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 TMEM56-RWDD3S4R434 201 aa4.39□□□□□ -1.71
ZEB1-220ENST00000560909 TRAV40A0A0B4J280 105 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 TEX13DA0A0J9YY54 714 aaPredicted RBP4.38□□□□□ -1.71
ZEB1-220ENST00000560909 C3orf85A0A1B0GTC6 90 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 C9orf170A2RU37 121 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 RNF212BA8MTL3 300 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 TIMM23O14925 209 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 ARPC1BO15143 372 aaKnown RBP4.38□□□□□ -1.71
ZEB1-220ENST00000560909 VENTXO95231 258 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 SFT2D2O95562 160 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 DUS4LO95620 317 aaKnown RBP4.38□□□□□ -1.71
ZEB1-220ENST00000560909 IGKV1-39P01597 117 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 IGKV1D-39P04432 117 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 CRYGBP07316 175 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 FGF2P09038 288 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 OR4E1P0C645 316 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 PGAM2P15259 253 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 RPA2P15927 270 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 ANXA7P20073 488 aaKnown RBP4.38□□□□□ -1.71
ZEB1-220ENST00000560909 S100GP29377 79 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 KIR2DS2P43631 304 aa4.38□□□□□ -1.71
ZEB1-220ENST00000560909 LGALS7P47929 136 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms