RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 ARL6IP5O75915 188 aa7.04□□□□□ -1.28
HERC1-210ENST00000560897 OR7C1O76099 320 aaPredicted RBP7.04□□□□□ -1.28
HERC1-210ENST00000560897 HTR3BO95264 441 aa7.04□□□□□ -1.28
HERC1-210ENST00000560897 CD1AP06126 327 aa7.04□□□□□ -1.28
HERC1-210ENST00000560897 RAB3AP20336 220 aa7.04□□□□□ -1.28
HERC1-210ENST00000560897 NANOS3P60323 173 aaKnown RBP7.04□□□□□ -1.28
HERC1-210ENST00000560897 IRF3Q14653 427 aa7.04□□□□□ -1.28
HERC1-210ENST00000560897 MRGPRG-AS1Q2M3A8 158 aa7.04□□□□□ -1.28
HERC1-210ENST00000560897 PIGYQ3MUY2 71 aa7.04□□□□□ -1.28
HERC1-210ENST00000560897 Q499Y3 187 aa7.04□□□□□ -1.28
HERC1-210ENST00000560897 ACSM3Q53FZ2 586 aa7.04□□□□□ -1.28
HERC1-210ENST00000560897 UBE2UQ5VVX9 321 aa7.04□□□□□ -1.28
HERC1-210ENST00000560897 DMKNQ6E0U4 476 aaPredicted RBP7.04□□□□□ -1.28
HERC1-210ENST00000560897 ELP2Q6IA86 826 aa7.04□□□□□ -1.28
HERC1-210ENST00000560897 GPR141Q7Z602 305 aa7.04□□□□□ -1.28
HERC1-210ENST00000560897 CEACAM19Q7Z692 300 aa7.04□□□□□ -1.28
HERC1-210ENST00000560897 PARP12Q9H0J9 701 aaKnown RBP7.04□□□□□ -1.28
HERC1-210ENST00000560897 OR2S2Q9NQN1 319 aa7.04□□□□□ -1.28
HERC1-210ENST00000560897 TRAPPC2LQ9UL33 140 aa7.04□□□□□ -1.28
HERC1-210ENST00000560897 TRAV10A0A0B4J240 114 aa7.03□□□□□ -1.28
HERC1-210ENST00000560897 CCDC160A6NGH7 325 aa7.03□□□□□ -1.28
HERC1-210ENST00000560897 OR5H14A6NHG9 310 aa7.03□□□□□ -1.28
HERC1-210ENST00000560897 PDCD5O14737 125 aa7.03□□□□□ -1.28
HERC1-210ENST00000560897 IFNA10P01566 189 aa7.03□□□□□ -1.28
HERC1-210ENST00000560897 SCTP09683 121 aa7.03□□□□□ -1.28
HERC1-210ENST00000560897 CD36P16671 472 aa7.03□□□□□ -1.28
HERC1-210ENST00000560897 MYL9P24844 172 aa7.03□□□□□ -1.28
HERC1-210ENST00000560897 FCGR2BP31994 310 aaPredicted RBP7.03□□□□□ -1.28
HERC1-210ENST00000560897 OR3A3P47888 321 aa7.03□□□□□ -1.28
HERC1-210ENST00000560897 PSMD7P51665 324 aa7.03□□□□□ -1.28
HERC1-210ENST00000560897 TPBGQ13641 420 aa7.03□□□□□ -1.28
HERC1-210ENST00000560897 EXOSC2Q13868 293 aaKnown RBP7.03□□□□□ -1.28
HERC1-210ENST00000560897 RSU1Q15404 277 aa7.03□□□□□ -1.28
HERC1-210ENST00000560897 HSD17B12Q53GQ0 312 aa7.03□□□□□ -1.28
HERC1-210ENST00000560897 ATAD3CQ5T2N8 411 aa7.03□□□□□ -1.28
HERC1-210ENST00000560897 C1orf134Q5TEV5 83 aa7.03□□□□□ -1.28
HERC1-210ENST00000560897 TRAT1Q6PIZ9 186 aa7.03□□□□□ -1.28
HERC1-210ENST00000560897 ZNF833PQ6ZTB9 187 aa7.03□□□□□ -1.28
HERC1-210ENST00000560897 UBE2DNLQ8IWF7 75 aa7.03□□□□□ -1.28
HERC1-210ENST00000560897 PHYHIPQ92561 330 aa7.03□□□□□ -1.28
HERC1-210ENST00000560897 PHB2Q99623 299 aa7.03□□□□□ -1.28
HERC1-210ENST00000560897 FAM192AQ9GZU8 254 aa7.03□□□□□ -1.28
HERC1-210ENST00000560897 ZFAND3Q9H8U3 227 aa7.03□□□□□ -1.28
HERC1-210ENST00000560897 UBQLN2Q9UHD9 624 aa7.03□□□□□ -1.28
HERC1-210ENST00000560897 IGLV2-18A0A075B6J9 118 aa7.02□□□□□ -1.29
HERC1-210ENST00000560897 SAA2-SAA4A0A096LPE2 208 aa7.02□□□□□ -1.29
HERC1-210ENST00000560897 LOC100506127A0A0U1RQW1 187 aa7.02□□□□□ -1.29
HERC1-210ENST00000560897 A0A1W2PPK0 400 aa7.02□□□□□ -1.29
HERC1-210ENST00000560897 LALBAP00709 142 aa7.02□□□□□ -1.29
HERC1-210ENST00000560897 HBZP02008 142 aa7.02□□□□□ -1.29
HERC1-210ENST00000560897 SAA2P0DJI9 122 aaPredicted RBP7.02□□□□□ -1.29
HERC1-210ENST00000560897 EDN2P20800 178 aa7.02□□□□□ -1.29
HERC1-210ENST00000560897 CBLN1P23435 193 aa7.02□□□□□ -1.29
HERC1-210ENST00000560897 MC5RP33032 325 aa7.02□□□□□ -1.29
HERC1-210ENST00000560897 RPL5P46777 297 aaKnown RBP7.02□□□□□ -1.29
HERC1-210ENST00000560897 KISS1Q15726 138 aa7.02□□□□□ -1.29
HERC1-210ENST00000560897 MORN2Q502X0 79 aa7.02□□□□□ -1.29
HERC1-210ENST00000560897 FAM209BQ5JX69 171 aa7.02□□□□□ -1.29
HERC1-210ENST00000560897 SYT6Q5T7P8 510 aaPredicted RBP7.02□□□□□ -1.29
HERC1-210ENST00000560897 GLT8D1Q68CQ7 371 aa7.02□□□□□ -1.29
HERC1-210ENST00000560897 XAF1Q6GPH4 301 aa7.02□□□□□ -1.29
HERC1-210ENST00000560897 OR2C3Q8N628 320 aa7.02□□□□□ -1.29
HERC1-210ENST00000560897 PXT1Q8NFP0 134 aa7.02□□□□□ -1.29
HERC1-210ENST00000560897 OR11H2Q8NH07 326 aa7.02□□□□□ -1.29
HERC1-210ENST00000560897 OR4A5Q8NH83 315 aa7.02□□□□□ -1.29
HERC1-210ENST00000560897 OR1L1Q8NH94 360 aa7.02□□□□□ -1.29
HERC1-210ENST00000560897 CACNG8Q8WXS5 425 aa7.02□□□□□ -1.29
HERC1-210ENST00000560897 GALNT14Q96FL9 552 aa7.02□□□□□ -1.29
HERC1-210ENST00000560897 OR14A2Q96R54 314 aa7.02□□□□□ -1.29
HERC1-210ENST00000560897 TSNAXQ99598 290 aaKnown RBP7.02□□□□□ -1.29
HERC1-210ENST00000560897 RNF5Q99942 180 aa7.02□□□□□ -1.29
HERC1-210ENST00000560897 RNF126Q9BV68 326 aa7.02□□□□□ -1.29
HERC1-210ENST00000560897 RCC2Q9P258 522 aaKnown RBP7.02□□□□□ -1.29
HERC1-210ENST00000560897 ST3GAL6Q9Y274 331 aa7.02□□□□□ -1.29
HERC1-210ENST00000560897 WASHC3Q9Y3C0 194 aa7.02□□□□□ -1.29
HERC1-210ENST00000560897 TRAV25A0A0B4J276 109 aa7.01□□□□□ -1.29
HERC1-210ENST00000560897 FAM223BA6NKX1 122 aa7.01□□□□□ -1.29
HERC1-210ENST00000560897 MPTX1A8MV57 137 aa7.01□□□□□ -1.29
HERC1-210ENST00000560897 DEFB4AO15263 64 aa7.01□□□□□ -1.29
HERC1-210ENST00000560897 SULT1B1O43704 296 aa7.01□□□□□ -1.29
HERC1-210ENST00000560897 GGCTO75223 188 aaKnown RBP7.01□□□□□ -1.29
HERC1-210ENST00000560897 SPDEFO95238 335 aa7.01□□□□□ -1.29
HERC1-210ENST00000560897 MT-ND4P03905 459 aa7.01□□□□□ -1.29
HERC1-210ENST00000560897 MAS1P04201 325 aa7.01□□□□□ -1.29
HERC1-210ENST00000560897 SRMP19623 302 aa7.01□□□□□ -1.29
HERC1-210ENST00000560897 BDKRB2P30411 391 aa7.01□□□□□ -1.29
HERC1-210ENST00000560897 ATP5G2Q06055 141 aa7.01□□□□□ -1.29
HERC1-210ENST00000560897 PSG5Q15238 335 aa7.01□□□□□ -1.29
HERC1-210ENST00000560897 FAM71F2Q6NXP2 309 aa7.01□□□□□ -1.29
HERC1-210ENST00000560897 BTNL8Q6UX41 500 aa7.01□□□□□ -1.29
HERC1-210ENST00000560897 ZNF497Q6ZNH5 498 aa7.01□□□□□ -1.29
HERC1-210ENST00000560897 LINC00596Q86U02 117 aa7.01□□□□□ -1.29
HERC1-210ENST00000560897 FAM223AQ8IWN6 122 aa7.01□□□□□ -1.29
HERC1-210ENST00000560897 ODF3L1Q8IXM7 274 aa7.01□□□□□ -1.29
HERC1-210ENST00000560897 JAGN1Q8N5M9 183 aa7.01□□□□□ -1.29
HERC1-210ENST00000560897 ZNF485Q8NCK3 441 aa7.01□□□□□ -1.29
HERC1-210ENST00000560897 ADAD2Q8NCV1 583 aaKnown RBP7.01□□□□□ -1.29
HERC1-210ENST00000560897 OR2AK2Q8NG84 335 aa7.01□□□□□ -1.29
HERC1-210ENST00000560897 OR10K1Q8NGX5 313 aa7.01□□□□□ -1.29
HERC1-210ENST00000560897 KCNG3Q8TAE7 436 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms