RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 FAM90A20PA6NIJ5 464 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 FAM90A8PA6NJQ4 464 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 NPIPB13A6NJU9 1138 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 FAM90A7PA6NKC0 464 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 FAM90A22PA8MWA6 464 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 FAM90A12PA8MX19 464 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 FAM90A5PA8MXJ8 464 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 FAM90A23PA8MXZ1 464 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 NPIPB4C9JG80 1138 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 FAM90A15PP0C7V4 464 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 FAM90A13PP0C7W8 464 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 FAM90A14PP0C7W9 464 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 FAM90A24PP0C7X0 464 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 SAXO1Q8IYX7 474 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 SIRT4Q9Y6E7 314 aaPredicted RBP11.55□□□□□ -0.56
TRAF3-208ENST00000560371 IGKV3OR2-268A0A0C4DH90 116 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 CGB1A6NKQ9 187 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 NUDT3O95989 172 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 LEAP2Q969E1 77 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 TOLLIPQ9H0E2 274 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 MED13Q9UHV7 2174 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 IGHV3OR16-10A0A075B7F0 116 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 BSPH1Q075Z2 132 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 SMAGPQ0VAQ4 97 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 LYRM7Q5U5X0 104 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 MS4A10Q96PG2 267 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 LINC00869P0C866 280 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 TOMM20LQ6UXN7 152 aa11.55□□□□□ -0.56
TRAF3-208ENST00000560371 PRSS53Q2L4Q9 553 aa11.54□□□□□ -0.56
TRAF3-208ENST00000560371 LRRC75AQ8NAA5 344 aa11.54□□□□□ -0.56
TRAF3-208ENST00000560371 FAM57AQ8TBR7 257 aa11.54□□□□□ -0.56
TRAF3-208ENST00000560371 SOSTQ9BQB4 213 aa11.54□□□□□ -0.56
TRAF3-208ENST00000560371 LINC00470Q9BZP3 86 aa11.54□□□□□ -0.56
TRAF3-208ENST00000560371 OR4C46A6NHA9 309 aa11.54□□□□□ -0.56
TRAF3-208ENST00000560371 SNRPCP09234 159 aaKnown RBP11.54□□□□□ -0.56
TRAF3-208ENST00000560371 NEURL2Q9BR09 285 aa11.54□□□□□ -0.56
TRAF3-208ENST00000560371 QTRT1Q9BXR0 403 aaKnown RBP11.54□□□□□ -0.56
TRAF3-208ENST00000560371 KCNE5Q9UJ90 142 aa11.54□□□□□ -0.56
TRAF3-208ENST00000560371 OR2A4O95047 310 aa11.54□□□□□ -0.56
TRAF3-208ENST00000560371 CELA3AP09093 270 aa11.54□□□□□ -0.56
TRAF3-208ENST00000560371 HERVK_113P61574 105 aa11.54□□□□□ -0.56
TRAF3-208ENST00000560371 Q6ZN92 141 aa11.54□□□□□ -0.56
TRAF3-208ENST00000560371 POM121Q96HA1 1249 aa11.54□□□□□ -0.56
TRAF3-208ENST00000560371 OR2A7Q96R45 310 aa11.54□□□□□ -0.56
TRAF3-208ENST00000560371 ZFHX2Q9C0A1 2572 aaPredicted RBP11.54□□□□□ -0.56
TRAF3-208ENST00000560371 OTOGLQ3ZCN5 2332 aa11.54□□□□□ -0.56
TRAF3-208ENST00000560371 ISLRO14498 428 aa11.54□□□□□ -0.56
TRAF3-208ENST00000560371 C19orf54Q5BKX5 351 aa11.54□□□□□ -0.56
TRAF3-208ENST00000560371 NEU4Q8WWR8 484 aaPredicted RBP11.54□□□□□ -0.56
TRAF3-208ENST00000560371 NOTCH2Q04721 2471 aa11.54□□□□□ -0.56
TRAF3-208ENST00000560371 MPDU1O75352 247 aa11.54□□□□□ -0.56
TRAF3-208ENST00000560371 OR4B1Q8NGF8 309 aa11.54□□□□□ -0.56
TRAF3-208ENST00000560371 RBM38Q9H0Z9 239 aaKnown RBP11.54□□□□□ -0.56
TRAF3-208ENST00000560371 FAM206AQ9NX38 181 aa11.54□□□□□ -0.56
TRAF3-208ENST00000560371 PXMP4Q9Y6I8 212 aa11.54□□□□□ -0.56
TRAF3-208ENST00000560371 OR1N2Q8NGR9 330 aa11.54□□□□□ -0.56
TRAF3-208ENST00000560371 SLC25A33Q9BSK2 321 aa11.54□□□□□ -0.56
TRAF3-208ENST00000560371 NOTCH4Q99466 2003 aa11.54□□□□□ -0.56
TRAF3-208ENST00000560371 FCGR2BP31994 310 aaPredicted RBP11.53□□□□□ -0.56
TRAF3-208ENST00000560371 IGLV3-21P80748 117 aaPredicted RBP11.53□□□□□ -0.56
TRAF3-208ENST00000560371 RPL24P83731 157 aaKnown RBP11.53□□□□□ -0.56
TRAF3-208ENST00000560371 SERF2P84101 59 aa11.53□□□□□ -0.56
TRAF3-208ENST00000560371 CXorf66Q5JRM2 361 aaPredicted RBP11.53□□□□□ -0.56
TRAF3-208ENST00000560371 BPIFA4PQ86YQ2 179 aa11.53□□□□□ -0.56
TRAF3-208ENST00000560371 PNKDQ8N490 385 aa11.53□□□□□ -0.56
TRAF3-208ENST00000560371 ZNRF1Q8ND25 227 aa11.53□□□□□ -0.56
TRAF3-208ENST00000560371 OR52M1Q8NGK5 317 aa11.53□□□□□ -0.56
TRAF3-208ENST00000560371 VWCEQ96DN2 955 aa11.53□□□□□ -0.56
TRAF3-208ENST00000560371 M0R2Z0 102 aa11.53□□□□□ -0.56
TRAF3-208ENST00000560371 FGFRL1Q8N441 504 aa11.53□□□□□ -0.56
TRAF3-208ENST00000560371 WFDC6Q9BQY6 131 aa11.53□□□□□ -0.56
TRAF3-208ENST00000560371 HSF4Q9ULV5 492 aa11.53□□□□□ -0.56
TRAF3-208ENST00000560371 NPBWR2P48146 333 aa11.53□□□□□ -0.56
TRAF3-208ENST00000560371 SUCLG1P53597 346 aaKnown RBP11.53□□□□□ -0.56
TRAF3-208ENST00000560371 COX19Q49B96 90 aa11.53□□□□□ -0.56
TRAF3-208ENST00000560371 LRP11Q86VZ4 500 aa11.53□□□□□ -0.56
TRAF3-208ENST00000560371 PACRGQ96M98 296 aaPredicted RBP11.53□□□□□ -0.56
TRAF3-208ENST00000560371 CBY1Q9Y3M2 126 aa11.53□□□□□ -0.56
TRAF3-208ENST00000560371 ZNF815PA8K554 130 aa11.53□□□□□ -0.56
TRAF3-208ENST00000560371 ZNF253O75346 499 aa11.53□□□□□ -0.56
TRAF3-208ENST00000560371 TMEM30BQ3MIR4 351 aa11.53□□□□□ -0.56
TRAF3-208ENST00000560371 MYOZ3Q8TDC0 251 aa11.53□□□□□ -0.56
TRAF3-208ENST00000560371 TMEM204Q9BSN7 226 aa11.53□□□□□ -0.56
TRAF3-208ENST00000560371 HIST3H3Q16695 136 aa11.53□□□□□ -0.56
TRAF3-208ENST00000560371 FAM216AQ8WUB2 273 aa11.53□□□□□ -0.56
TRAF3-208ENST00000560371 TMEM186Q96B77 213 aa11.53□□□□□ -0.56
TRAF3-208ENST00000560371 LMX1BO60663 402 aa11.53□□□□□ -0.56
TRAF3-208ENST00000560371 PLAUP00749 431 aa11.53□□□□□ -0.56
TRAF3-208ENST00000560371 PITX3O75364 302 aa11.52□□□□□ -0.56
TRAF3-208ENST00000560371 RELBQ01201 579 aa11.52□□□□□ -0.56
TRAF3-208ENST00000560371 ATP5G2Q06055 141 aa11.52□□□□□ -0.56
TRAF3-208ENST00000560371 UBE2V2Q15819 145 aa11.52□□□□□ -0.56
TRAF3-208ENST00000560371 GSX1Q9H4S2 264 aaPredicted RBP11.52□□□□□ -0.56
TRAF3-208ENST00000560371 MOB4Q9Y3A3 225 aa11.52□□□□□ -0.56
TRAF3-208ENST00000560371 DSPPQ9NZW4 1301 aa11.52□□□□□ -0.56
TRAF3-208ENST00000560371 ZNF729A6NN14 1252 aaPredicted RBP11.52□□□□□ -0.56
TRAF3-208ENST00000560371 CECR9P0C854 216 aa11.52□□□□□ -0.56
TRAF3-208ENST00000560371 TWIST1Q15672 202 aa11.52□□□□□ -0.56
TRAF3-208ENST00000560371 SSBP3Q9BWW4 388 aaPredicted RBP11.52□□□□□ -0.56
TRAF3-208ENST00000560371 HOXA6P31267 233 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms