RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 UCP3P55916 312 aa6.09□□□□□ -1.43
USP3-210ENST00000559192 CEACAM21Q3KPI0 293 aa6.09□□□□□ -1.43
USP3-210ENST00000559192 ZNF841Q6ZN19 808 aa6.09□□□□□ -1.43
USP3-210ENST00000559192 Q8IYB0 196 aa6.09□□□□□ -1.43
USP3-210ENST00000559192 C14orf144Q96I85 54 aa6.09□□□□□ -1.43
USP3-210ENST00000559192 ZG16O60844 167 aa6.09□□□□□ -1.44
USP3-210ENST00000559192 KBTBD11O94819 623 aa6.09□□□□□ -1.44
USP3-210ENST00000559192 LEPROTL1O95214 131 aa6.09□□□□□ -1.44
USP3-210ENST00000559192 SMIM21Q3B7S5 101 aa6.09□□□□□ -1.44
USP3-210ENST00000559192 FBLN7Q53RD9 439 aa6.09□□□□□ -1.44
USP3-210ENST00000559192 C10orf91Q5T1B1 145 aa6.09□□□□□ -1.44
USP3-210ENST00000559192 GATAD1Q8WUU5 269 aa6.09□□□□□ -1.44
USP3-210ENST00000559192 MRPL18Q9H0U6 180 aaKnown RBP6.09□□□□□ -1.44
USP3-210ENST00000559192 ASCL3Q9NQ33 180 aa6.09□□□□□ -1.44
USP3-210ENST00000559192 LOXL2Q9Y4K0 774 aa6.09□□□□□ -1.44
USP3-210ENST00000559192 LYZL6O75951 148 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 CCL4P13236 92 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 TNFSF10P50591 281 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 UBE2L3P68036 154 aaKnown RBP6.08□□□□□ -1.44
USP3-210ENST00000559192 OR8I2Q8N0Y5 310 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 OR2Z1Q8NG97 314 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 IMMP2LQ96T52 175 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 WNT5BQ9H1J7 359 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 CDC42EP3Q9UKI2 254 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 HEATR5BQ9P2D3 2071 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 NKX6-3A6NJ46 265 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 A6NNC1 897 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 MT-ND6P03923 174 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 SFTPCP11686 197 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 WNT5AP41221 380 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 TFF3Q07654 80 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 FGFRL1Q8N441 504 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 OR4D5Q8NGN0 318 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 ABHD14BQ96IU4 210 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 POM121L2Q96KW2 1035 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 TMEM167BQ9NRX6 74 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 ASCC3Q8N3C0 2202 aaKnown RBP6.08□□□□□ -1.44
USP3-210ENST00000559192 IGKV1D-13A0A0B4J2D9 117 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 ZNF716A6NP11 495 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 PROB1E7EW31 1015 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 NPIPB7O75200 414 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 IGKV1-13P0DP09 117 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 LYL1P12980 280 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 COL8A1P27658 744 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 MAGEA5P43359 124 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 MFAP2P55001 183 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 DGAT2L7PQ6IED9 249 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 TGIF2LYQ8IUE0 185 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 FAM89BQ8N5H3 189 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 BMPERQ8N8U9 685 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 OR8G5Q8NG78 346 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 OR4F17Q8NGA8 305 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 EDARADDQ8WWZ3 215 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 ZDHHC16Q969W1 377 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 SAP30LQ9HAJ7 183 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 FBLN5Q9UBX5 448 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 ANAPC1Q9H1A4 1944 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 LOC389332A0A1B0GUA5 103 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 M0R1B8 84 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 OR2H2O95918 312 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 CXorf1O96002 111 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 HLA-DRB1P01911 266 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 FXYD3Q14802 87 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 WBP1Q96G27 269 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 PMCHL2Q9BQD1 86 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 SH2D2AQ9NP31 389 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 JKAMPQ9P055 326 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 MPC1Q9Y5U8 109 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 TCF20Q9UGU0 1960 aaKnown RBP6.08□□□□□ -1.44
USP3-210ENST00000559192 KNL1Q8NG31 2342 aa6.08□□□□□ -1.44
USP3-210ENST00000559192 NPIPB13A6NJU9 1138 aa6.07□□□□□ -1.44
USP3-210ENST00000559192 NPIPB4C9JG80 1138 aa6.07□□□□□ -1.44
USP3-210ENST00000559192 HPRT1P00492 218 aa6.07□□□□□ -1.44
USP3-210ENST00000559192 ARL14EPLP0DKL9 152 aa6.07□□□□□ -1.44
USP3-210ENST00000559192 CCL11P51671 97 aa6.07□□□□□ -1.44
USP3-210ENST00000559192 DNM1P46Q6ZS02 220 aa6.07□□□□□ -1.44
USP3-210ENST00000559192 TCF23Q7RTU1 214 aa6.07□□□□□ -1.44
USP3-210ENST00000559192 C1QL4Q86Z23 238 aa6.07□□□□□ -1.44
USP3-210ENST00000559192 OR5R1Q8NH85 324 aa6.07□□□□□ -1.44
USP3-210ENST00000559192 PSMG3Q9BT73 122 aaPredicted RBP6.07□□□□□ -1.44
USP3-210ENST00000559192 PHF7Q9BWX1 381 aaPredicted RBP6.07□□□□□ -1.44
USP3-210ENST00000559192 HS3ST3B1Q9Y662 390 aa6.07□□□□□ -1.44
USP3-210ENST00000559192 TDRD6O60522 2096 aaKnown RBP6.07□□□□□ -1.44
USP3-210ENST00000559192 ZNF785A8K8V0 405 aa6.07□□□□□ -1.44
USP3-210ENST00000559192 AGFG2O95081 481 aa6.07□□□□□ -1.44
USP3-210ENST00000559192 IGHV2-70P01814 119 aa6.07□□□□□ -1.44
USP3-210ENST00000559192 LIPFP07098 398 aa6.07□□□□□ -1.44
USP3-210ENST00000559192 OR4A8P0C604 315 aa6.07□□□□□ -1.44
USP3-210ENST00000559192 CBLN1P23435 193 aa6.07□□□□□ -1.44
USP3-210ENST00000559192 IGFBP7Q16270 282 aa6.07□□□□□ -1.44
USP3-210ENST00000559192 KIAA1644Q3SXP7 199 aa6.07□□□□□ -1.44
USP3-210ENST00000559192 CDX2Q99626 313 aaPredicted RBP6.07□□□□□ -1.44
USP3-210ENST00000559192 IGHV1-45A0A0A0MS14 117 aa6.07□□□□□ -1.44
USP3-210ENST00000559192 WIPF3A6NGB9 483 aa6.07□□□□□ -1.44
USP3-210ENST00000559192 SYNGR3O43761 229 aa6.07□□□□□ -1.44
USP3-210ENST00000559192 ORM1P02763 201 aa6.07□□□□□ -1.44
USP3-210ENST00000559192 SP1P08047 785 aa6.07□□□□□ -1.44
USP3-210ENST00000559192 MIC13Q5XKP0 118 aa6.07□□□□□ -1.44
USP3-210ENST00000559192 LYG1Q8N1E2 194 aa6.07□□□□□ -1.44
USP3-210ENST00000559192 OR10W1Q8NGF6 305 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms