RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 P0DMU3 169 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 FAM231AP0DMU4 169 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 FAM231CP0DMU5 169 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 TCN2P20062 427 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 COX5AP20674 150 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 EVI2AP22794 236 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 CMPK1P30085 196 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 LEPP41159 167 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 SULT1A1P50225 295 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 SULT1A2P50226 295 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 SNRPD2P62316 118 aaKnown RBP1.2□□□□□ -2.22
HIF1A-212ENST00000557538 TGFBR3Q03167 851 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 MEF2CQ06413 473 aaPredicted RBP1.2□□□□□ -2.22
HIF1A-212ENST00000557538 HTR4Q13639 388 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 CLINT1Q14677 625 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 GUSBP1Q15486 140 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 LTC4SQ16873 150 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 GLYATL3Q5SZD4 288 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 LAIR2Q6ISS4 152 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 LHFPL1Q86WI0 220 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 SVBPQ8N300 66 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 FER1L6-AS1Q8NA97 138 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 SKA2Q8WVK7 121 aaPredicted RBP1.2□□□□□ -2.22
HIF1A-212ENST00000557538 FGF11Q92914 225 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF681Q96N22 645 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 RASL11BQ9BPW5 248 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 RNF126Q9BV68 326 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 FAIM2Q9BWQ8 316 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 SEC11CQ9BY50 192 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 CHIAQ9BZP6 476 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 VSIRQ9H7M9 311 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 POPDC3Q9HBV1 291 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 SLCO1B3Q9NPD5 702 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 RPS10P5Q9NQ39 176 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 SPANXB1Q9NS25 103 aaPredicted RBP1.2□□□□□ -2.22
HIF1A-212ENST00000557538 CBLN4Q9NTU7 201 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 CLN6Q9NWW5 311 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 NUFIP1Q9UHK0 495 aaKnown RBP1.2□□□□□ -2.22
HIF1A-212ENST00000557538 OR51B2Q9Y5P1 312 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 V9GYS6 101 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 QSER1Q2KHR3 1735 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 RREB1Q92766 1687 aa1.2□□□□□ -2.22
HIF1A-212ENST00000557538 CPS1P31327 1500 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 DDX60LQ5H9U9 1706 aaKnown RBP1.19□□□□□ -2.22
HIF1A-212ENST00000557538 TSPOAP1O95153 1857 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 PDCD11Q14690 1871 aaKnown RBP1.19□□□□□ -2.22
HIF1A-212ENST00000557538 ALS2Q96Q42 1657 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 TRAV36DV7A0A075B6V5 113 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 A0A087WXM4 84 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 DEGS1O15121 323 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 MPDU1O75352 247 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 OR7C1O76099 320 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-212ENST00000557538 YIF1AO95070 293 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 CLIC3O95833 236 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 IGKV3-15P01624 115 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 IGHMP01871 453 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 TTRP02766 147 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 MAS1P04201 325 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 RHOCP08134 193 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 CD99P14209 185 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 GABRA3P34903 492 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 OR1E2P47887 323 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 UBE2E1P51965 193 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 DLX1P56177 255 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 TAS2R31P59538 309 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 C1QTNF8P60827 252 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 UBE2KP61086 200 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF763Q0D2J5 394 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 GINS1Q14691 196 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 OR8B8Q15620 311 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF79Q15937 498 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 NRF1Q16656 503 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 UBE2SQ16763 222 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 GSG1Q2KHT4 349 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 CEACAM16Q2WEN9 425 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 TEX36Q5VZQ5 186 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 GLIPR1L1Q6UWM5 242 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 C6orf120Q7Z4R8 191 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 SH2D6Q7Z4S9 175 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 CBR4Q8N4T8 237 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 JAGN1Q8N5M9 183 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 C14orf178Q8N769 122 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-212ENST00000557538 OR1L8Q8NGR8 309 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 ZPLD1Q8TCW7 415 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 SFXN5Q8TD22 340 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 THEM6Q8WUY1 208 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 SRSF12Q8WXF0 261 aaKnown RBP1.19□□□□□ -2.22
HIF1A-212ENST00000557538 PP6455Q8WZ26 134 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 IL22RA2Q969J5 263 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 UBE2E3Q969T4 207 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 TMEM106AQ96A25 262 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 SDSLQ96GA7 329 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 UBE2E2Q96LR5 201 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 AGMATQ9BSE5 352 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 SCRT1Q9BWW7 348 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 PECRQ9BY49 303 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 OR8D2Q9GZM6 311 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 SLC25A31Q9H0C2 315 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 TMEM222Q9H0R3 208 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 LPAR5Q9H1C0 372 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms