RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 LAX1Q8IWV1 398 aa6.59□□□□□ -1.35
VRK1-206ENST00000557222 FAM89BQ8N5H3 189 aa6.59□□□□□ -1.35
VRK1-206ENST00000557222 ZFP41Q8N8Y5 198 aa6.59□□□□□ -1.35
VRK1-206ENST00000557222 ABHD14BQ96IU4 210 aa6.59□□□□□ -1.35
VRK1-206ENST00000557222 CLCC1Q96S66 551 aa6.59□□□□□ -1.35
VRK1-206ENST00000557222 FAM103A1Q9BTL3 118 aaKnown RBP6.59□□□□□ -1.35
VRK1-206ENST00000557222 TINAGL1Q9GZM7 467 aaPredicted RBP6.59□□□□□ -1.35
VRK1-206ENST00000557222 TMPRSS5Q9H3S3 457 aa6.59□□□□□ -1.35
VRK1-206ENST00000557222 CHMP1AQ9HD42 196 aaPredicted RBP6.59□□□□□ -1.35
VRK1-206ENST00000557222 ZNF355PQ9NSJ1 428 aa6.59□□□□□ -1.35
VRK1-206ENST00000557222 PEF1Q9UBV8 284 aaKnown RBP6.59□□□□□ -1.35
VRK1-206ENST00000557222 ZNF221Q9UK13 617 aa6.59□□□□□ -1.35
VRK1-206ENST00000557222 HSF4Q9ULV5 492 aa6.59□□□□□ -1.35
VRK1-206ENST00000557222 MYL12BO14950 172 aa6.58□□□□□ -1.36
VRK1-206ENST00000557222 CNIH1O95406 144 aa6.58□□□□□ -1.36
VRK1-206ENST00000557222 DIRAS3O95661 229 aa6.58□□□□□ -1.36
VRK1-206ENST00000557222 IGKV1-16P04430 117 aa6.58□□□□□ -1.36
VRK1-206ENST00000557222 CRYGBP07316 175 aa6.58□□□□□ -1.36
VRK1-206ENST00000557222 SRMP19623 302 aa6.58□□□□□ -1.36
VRK1-206ENST00000557222 SERPINB10P48595 397 aa6.58□□□□□ -1.36
VRK1-206ENST00000557222 HLA-DRB3P79483 266 aa6.58□□□□□ -1.36
VRK1-206ENST00000557222 QRFPP83859 136 aa6.58□□□□□ -1.36
VRK1-206ENST00000557222 ACSM3Q53FZ2 586 aa6.58□□□□□ -1.36
VRK1-206ENST00000557222 RNLSQ5VYX0 342 aa6.58□□□□□ -1.36
VRK1-206ENST00000557222 LRRTM1Q86UE6 522 aa6.58□□□□□ -1.36
VRK1-206ENST00000557222 PACRGLQ8N7B6 248 aa6.58□□□□□ -1.36
VRK1-206ENST00000557222 NANOGP1Q8N7R0 232 aa6.58□□□□□ -1.36
VRK1-206ENST00000557222 ZNF383Q8NA42 475 aa6.58□□□□□ -1.36
VRK1-206ENST00000557222 SNAPC3Q92966 411 aa6.58□□□□□ -1.36
VRK1-206ENST00000557222 URM1Q9BTM9 101 aaKnown RBP6.58□□□□□ -1.36
VRK1-206ENST00000557222 Q9N2K0 584 aa6.58□□□□□ -1.36
VRK1-206ENST00000557222 PLCXD1Q9NUJ7 323 aa6.58□□□□□ -1.36
VRK1-206ENST00000557222 GAR1Q9NY12 217 aaKnown RBP6.58□□□□□ -1.36
VRK1-206ENST00000557222 PEMTQ9UBM1 199 aa6.58□□□□□ -1.36
VRK1-206ENST00000557222 PSORS1C1Q9UIG5 152 aa6.58□□□□□ -1.36
VRK1-206ENST00000557222 PNMA8CA0A1B0GUJ8 204 aa6.57□□□□□ -1.36
VRK1-206ENST00000557222 ZNF561-AS1K7EIQ3 104 aa6.57□□□□□ -1.36
VRK1-206ENST00000557222 SLC25A17O43808 307 aa6.57□□□□□ -1.36
VRK1-206ENST00000557222 IGLV2-23P01705 113 aa6.57□□□□□ -1.36
VRK1-206ENST00000557222 CSN3P07498 182 aa6.57□□□□□ -1.36
VRK1-206ENST00000557222 RRASP10301 218 aa6.57□□□□□ -1.36
VRK1-206ENST00000557222 SYNJ2BPP57105 145 aa6.57□□□□□ -1.36
VRK1-206ENST00000557222 SSBP2P81877 361 aaPredicted RBP6.57□□□□□ -1.36
VRK1-206ENST00000557222 UNC119Q13432 240 aa6.57□□□□□ -1.36
VRK1-206ENST00000557222 OR10K2Q6IF99 312 aa6.57□□□□□ -1.36
VRK1-206ENST00000557222 ADAMTSL5Q6ZMM2 481 aa6.57□□□□□ -1.36
VRK1-206ENST00000557222 HAPLN4Q86UW8 402 aa6.57□□□□□ -1.36
VRK1-206ENST00000557222 DHRSXQ8N5I4 330 aa6.57□□□□□ -1.36
VRK1-206ENST00000557222 OR5T1Q8NG75 326 aa6.57□□□□□ -1.36
VRK1-206ENST00000557222 OR6M1Q8NGM8 313 aa6.57□□□□□ -1.36
VRK1-206ENST00000557222 GRPEL2Q8TAA5 225 aa6.57□□□□□ -1.36
VRK1-206ENST00000557222 SETD6Q8TBK2 473 aa6.57□□□□□ -1.36
VRK1-206ENST00000557222 CYGBQ8WWM9 190 aa6.57□□□□□ -1.36
VRK1-206ENST00000557222 CYYR1Q96J86 154 aa6.57□□□□□ -1.36
VRK1-206ENST00000557222 CENPOQ9BU64 300 aa6.57□□□□□ -1.36
VRK1-206ENST00000557222 PARP12Q9H0J9 701 aaKnown RBP6.57□□□□□ -1.36
VRK1-206ENST00000557222 LPAR5Q9H1C0 372 aa6.57□□□□□ -1.36
VRK1-206ENST00000557222 HIPK2Q9H2X6 1198 aa6.57□□□□□ -1.36
VRK1-206ENST00000557222 C12orf4Q9NQ89 552 aa6.57□□□□□ -1.36
VRK1-206ENST00000557222 SLC35D1Q9NTN3 355 aa6.57□□□□□ -1.36
VRK1-206ENST00000557222 OR1A1Q9P1Q5 309 aa6.57□□□□□ -1.36
VRK1-206ENST00000557222 A0A0B4J203 849 aa6.56□□□□□ -1.36
VRK1-206ENST00000557222 FOXI3A8MTJ6 420 aaPredicted RBP6.56□□□□□ -1.36
VRK1-206ENST00000557222 TRDCB7Z8K6 153 aa6.56□□□□□ -1.36
VRK1-206ENST00000557222 CBX3Q13185 183 aa6.56□□□□□ -1.36
VRK1-206ENST00000557222 DYRK1AQ13627 763 aa6.56□□□□□ -1.36
VRK1-206ENST00000557222 TPBGQ13641 420 aa6.56□□□□□ -1.36
VRK1-206ENST00000557222 RPEL1Q2QD12 228 aa6.56□□□□□ -1.36
VRK1-206ENST00000557222 TMEM177Q53S58 311 aa6.56□□□□□ -1.36
VRK1-206ENST00000557222 TEX45Q8NA69 505 aa6.56□□□□□ -1.36
VRK1-206ENST00000557222 DRAXINQ8NBI3 349 aaPredicted RBP6.56□□□□□ -1.36
VRK1-206ENST00000557222 OR4A4PQ8NGN8 299 aa6.56□□□□□ -1.36
VRK1-206ENST00000557222 NICN1Q9BSH3 213 aa6.56□□□□□ -1.36
VRK1-206ENST00000557222 TMED9Q9BVK6 235 aa6.56□□□□□ -1.36
VRK1-206ENST00000557222 FKBP14Q9NWM8 211 aa6.56□□□□□ -1.36
VRK1-206ENST00000557222 SLC2A8Q9NY64 477 aa6.56□□□□□ -1.36
VRK1-206ENST00000557222 AK3Q9UIJ7 227 aa6.56□□□□□ -1.36
VRK1-206ENST00000557222 CEPT1Q9Y6K0 416 aa6.56□□□□□ -1.36
VRK1-206ENST00000557222 A0A0A6YYD4 124 aa6.55□□□□□ -1.36
VRK1-206ENST00000557222 FAM223BA6NKX1 122 aa6.55□□□□□ -1.36
VRK1-206ENST00000557222 M0R1X1 148 aa6.55□□□□□ -1.36
VRK1-206ENST00000557222 SOCS1O15524 211 aa6.55□□□□□ -1.36
VRK1-206ENST00000557222 TPPPO94811 219 aa6.55□□□□□ -1.36
VRK1-206ENST00000557222 SCTP09683 121 aa6.55□□□□□ -1.36
VRK1-206ENST00000557222 UCHL1P09936 223 aa6.55□□□□□ -1.36
VRK1-206ENST00000557222 TMEM50BP56557 158 aa6.55□□□□□ -1.36
VRK1-206ENST00000557222 PJVKQ0ZLH3 352 aa6.55□□□□□ -1.36
VRK1-206ENST00000557222 RTL8BQ17RB0 113 aa6.55□□□□□ -1.36
VRK1-206ENST00000557222 HSD17B12Q53GQ0 312 aa6.55□□□□□ -1.36
VRK1-206ENST00000557222 RBM48Q5RL73 367 aaKnown RBP6.55□□□□□ -1.36
VRK1-206ENST00000557222 FAM223AQ8IWN6 122 aa6.55□□□□□ -1.36
VRK1-206ENST00000557222 C8orf59Q8N0T1 100 aaPredicted RBP6.55□□□□□ -1.36
VRK1-206ENST00000557222 ADAD2Q8NCV1 583 aaKnown RBP6.55□□□□□ -1.36
VRK1-206ENST00000557222 ADTRPQ96IZ2 230 aa6.55□□□□□ -1.36
VRK1-206ENST00000557222 HARBI1Q96MB7 349 aa6.55□□□□□ -1.36
VRK1-206ENST00000557222 CMSS1Q9BQ75 279 aaKnown RBP6.55□□□□□ -1.36
VRK1-206ENST00000557222 MND1Q9BWT6 205 aa6.55□□□□□ -1.36
VRK1-206ENST00000557222 COA4Q9NYJ1 87 aa6.55□□□□□ -1.36
VRK1-206ENST00000557222 RDH8Q9NYR8 311 aa6.55□□□□□ -1.36
VRK1-206ENST00000557222 TECRQ9NZ01 308 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms