RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 SHANK3Q9BYB0 1731 aa9.18□□□□□ -0.94
ACTN1-216ENST00000556083 IGHV3OR15-7A0A075B7D8 119 aa9.18□□□□□ -0.94
ACTN1-216ENST00000556083 A0A1W2PRD5 423 aa9.18□□□□□ -0.94
ACTN1-216ENST00000556083 A0A1W2PRF3 423 aa9.18□□□□□ -0.94
ACTN1-216ENST00000556083 A0A1W2PRM7 423 aa9.18□□□□□ -0.94
ACTN1-216ENST00000556083 CD5P06127 495 aa9.18□□□□□ -0.94
ACTN1-216ENST00000556083 ANOS1P23352 680 aa9.18□□□□□ -0.94
ACTN1-216ENST00000556083 KLHDC2Q9Y2U9 406 aa9.18□□□□□ -0.94
ACTN1-216ENST00000556083 CBY3A6NI87 242 aa9.17□□□□□ -0.94
ACTN1-216ENST00000556083 RBFOX2O43251 390 aaKnown RBP eCLIP9.17□□□□□ -0.943e-6■■■□□ 16.3
ACTN1-216ENST00000556083 ADIPOQQ15848 244 aa9.17□□□□□ -0.94
ACTN1-216ENST00000556083 TIMP4Q99727 224 aa9.17□□□□□ -0.94
ACTN1-216ENST00000556083 ALKBH7Q9BT30 221 aaPredicted RBP9.17□□□□□ -0.94
ACTN1-216ENST00000556083 OR5AC2Q9NZP5 309 aa9.17□□□□□ -0.94
ACTN1-216ENST00000556083 COL5A3P25940 1745 aaPredicted RBP9.17□□□□□ -0.94
ACTN1-216ENST00000556083 A0A087X0M5 115 aa9.17□□□□□ -0.94
ACTN1-216ENST00000556083 IGLV3-32A0A0A0MS00 114 aa9.17□□□□□ -0.94
ACTN1-216ENST00000556083 A0A1B0GX30 115 aa9.17□□□□□ -0.94
ACTN1-216ENST00000556083 PRR19A6NJB7 356 aa9.17□□□□□ -0.94
ACTN1-216ENST00000556083 FAM90A9PA6NNJ1 464 aa9.17□□□□□ -0.94
ACTN1-216ENST00000556083 DIRC3C9JPN6 131 aa9.17□□□□□ -0.94
ACTN1-216ENST00000556083 CSRP3P50461 194 aa9.17□□□□□ -0.94
ACTN1-216ENST00000556083 EFNB2P52799 333 aa9.17□□□□□ -0.94
ACTN1-216ENST00000556083 FUT5Q11128 374 aa9.17□□□□□ -0.94
ACTN1-216ENST00000556083 ZNF418Q8TF45 676 aaPredicted RBP9.17□□□□□ -0.94
ACTN1-216ENST00000556083 GPR146Q96CH1 333 aa9.17□□□□□ -0.94
ACTN1-216ENST00000556083 LOC102723996A0A087X1L8 192 aa9.17□□□□□ -0.94
ACTN1-216ENST00000556083 SOD3P08294 240 aa9.17□□□□□ -0.94
ACTN1-216ENST00000556083 DLX6P56179 175 aa9.17□□□□□ -0.94
ACTN1-216ENST00000556083 TCL1AP56279 114 aa9.17□□□□□ -0.94
ACTN1-216ENST00000556083 CFHR1Q03591 330 aa9.17□□□□□ -0.94
ACTN1-216ENST00000556083 DCAF12L2Q5VW00 463 aa9.17□□□□□ -0.94
ACTN1-216ENST00000556083 MEGF10Q96KG7 1140 aa9.17□□□□□ -0.94
ACTN1-216ENST00000556083 KCNE5Q9UJ90 142 aa9.17□□□□□ -0.94
ACTN1-216ENST00000556083 CD8AP01732 235 aa9.17□□□□□ -0.94
ACTN1-216ENST00000556083 RPLP1P05386 114 aaKnown RBP9.17□□□□□ -0.94
ACTN1-216ENST00000556083 CEBPDP49716 269 aaPredicted RBP9.17□□□□□ -0.94
ACTN1-216ENST00000556083 CX3CL1P78423 397 aa9.17□□□□□ -0.94
ACTN1-216ENST00000556083 GUCA2BQ16661 112 aa9.17□□□□□ -0.94
ACTN1-216ENST00000556083 LINC01559Q495D7 138 aa9.17□□□□□ -0.94
ACTN1-216ENST00000556083 LINC01590Q5TEZ4 76 aa9.17□□□□□ -0.94
ACTN1-216ENST00000556083 SFRP2Q96HF1 295 aa9.17□□□□□ -0.94
ACTN1-216ENST00000556083 LINC00312Q9Y6C7 94 aa9.17□□□□□ -0.94
ACTN1-216ENST00000556083 SPAG17Q6Q759 2223 aa9.17□□□□□ -0.94
ACTN1-216ENST00000556083 NPIPB9F8W1W9 429 aa9.16□□□□□ -0.94
ACTN1-216ENST00000556083 FOLR2P14207 255 aa9.16□□□□□ -0.94
ACTN1-216ENST00000556083 REC114Q7Z4M0 266 aa9.16□□□□□ -0.94
ACTN1-216ENST00000556083 PRELID3AQ96N28 172 aa9.16□□□□□ -0.94
ACTN1-216ENST00000556083 TMEM106BQ9NUM4 274 aa9.16□□□□□ -0.94
ACTN1-216ENST00000556083 IL18BPO95998 194 aa9.16□□□□□ -0.94
ACTN1-216ENST00000556083 ZNF708P17019 499 aa9.16□□□□□ -0.94
ACTN1-216ENST00000556083 OR4X2Q8NGF9 303 aa9.16□□□□□ -0.94
ACTN1-216ENST00000556083 RNASE6Q93091 150 aaKnown RBP9.16□□□□□ -0.94
ACTN1-216ENST00000556083 FAM131CQ96AQ9 280 aa9.16□□□□□ -0.94
ACTN1-216ENST00000556083 CCL19Q99731 98 aa9.16□□□□□ -0.94
ACTN1-216ENST00000556083 C1QTNF5Q9BXJ0 243 aa9.16□□□□□ -0.94
ACTN1-216ENST00000556083 PEMTQ9UBM1 199 aa9.16□□□□□ -0.94
ACTN1-216ENST00000556083 BRWD1Q9NSI6 2320 aa9.16□□□□□ -0.94
ACTN1-216ENST00000556083 SCTP09683 121 aa9.16□□□□□ -0.94
ACTN1-216ENST00000556083 FAM159AQ6UWV7 190 aa9.16□□□□□ -0.94
ACTN1-216ENST00000556083 LRTM2Q8N967 370 aa9.16□□□□□ -0.94
ACTN1-216ENST00000556083 CHODLQ9H9P2 273 aa9.16□□□□□ -0.94
ACTN1-216ENST00000556083 SLC25A17O43808 307 aa9.16□□□□□ -0.94
ACTN1-216ENST00000556083 LEPROTL1O95214 131 aa9.16□□□□□ -0.94
ACTN1-216ENST00000556083 DANCRP0C864 163 aa9.16□□□□□ -0.94
ACTN1-216ENST00000556083 STAG3L3P0CL85 134 aa9.16□□□□□ -0.94
ACTN1-216ENST00000556083 WNT5AP41221 380 aa9.16□□□□□ -0.94
ACTN1-216ENST00000556083 FXYD3Q14802 87 aa9.16□□□□□ -0.94
ACTN1-216ENST00000556083 TCF23Q7RTU1 214 aa9.16□□□□□ -0.94
ACTN1-216ENST00000556083 RSG1Q9BU20 258 aa9.16□□□□□ -0.94
ACTN1-216ENST00000556083 FSCN3Q9NQT6 498 aa9.16□□□□□ -0.94
ACTN1-216ENST00000556083 KIF13BQ9NQT8 1826 aa9.15□□□□□ -0.94
ACTN1-216ENST00000556083 A0A0B4J293 547 aa9.15□□□□□ -0.94
ACTN1-216ENST00000556083 ZNF324O75467 553 aaPredicted RBP9.15□□□□□ -0.94
ACTN1-216ENST00000556083 ATP5LO75964 103 aa9.15□□□□□ -0.94
ACTN1-216ENST00000556083 HLA-DRB1P01911 266 aa9.15□□□□□ -0.94
ACTN1-216ENST00000556083 HKR1P10072 659 aa9.15□□□□□ -0.94
ACTN1-216ENST00000556083 TAS2R60P59551 318 aa9.15□□□□□ -0.94
ACTN1-216ENST00000556083 UNC119Q13432 240 aa9.15□□□□□ -0.94
ACTN1-216ENST00000556083 IGSF11Q5DX21 431 aa9.15□□□□□ -0.94
ACTN1-216ENST00000556083 UQCR10Q9UDW1 63 aa9.15□□□□□ -0.94
ACTN1-216ENST00000556083 RGPD3A6NKT7 1758 aaPredicted RBP9.15□□□□□ -0.94
ACTN1-216ENST00000556083 IGKV1D-42A0A075B6H8 117 aa9.15□□□□□ -0.94
ACTN1-216ENST00000556083 GDF9O60383 454 aa9.15□□□□□ -0.94
ACTN1-216ENST00000556083 UCP1P25874 307 aa9.15□□□□□ -0.94
ACTN1-216ENST00000556083 HILPDAQ9Y5L2 63 aa9.15□□□□□ -0.94
ACTN1-216ENST00000556083 PLXNB2O15031 1838 aa9.15□□□□□ -0.94
ACTN1-216ENST00000556083 XIRP1Q702N8 1843 aaKnown RBP9.15□□□□□ -0.95
ACTN1-216ENST00000556083 OOSP1A8MZH6 123 aa9.15□□□□□ -0.95
ACTN1-216ENST00000556083 IGHV3-13P01766 116 aa9.15□□□□□ -0.95
ACTN1-216ENST00000556083 IGHV3-7P01780 117 aa9.15□□□□□ -0.95
ACTN1-216ENST00000556083 GPX1P07203 203 aa9.15□□□□□ -0.95
ACTN1-216ENST00000556083 LINC00271P0C7V0 271 aa9.15□□□□□ -0.95
ACTN1-216ENST00000556083 HINT1P49773 126 aaPredicted RBP9.15□□□□□ -0.95
ACTN1-216ENST00000556083 TMEM187Q14656 261 aa9.15□□□□□ -0.95
ACTN1-216ENST00000556083 OR8A1Q8NGG7 326 aa9.15□□□□□ -0.95
ACTN1-216ENST00000556083 KLF4O43474 513 aa9.14□□□□□ -0.95
ACTN1-216ENST00000556083 NDUFB4O95168 129 aa9.14□□□□□ -0.95
ACTN1-216ENST00000556083 LGALS3P17931 250 aaKnown RBP9.14□□□□□ -0.95
ACTN1-216ENST00000556083 SRSF7Q16629 238 aaKnown RBP eCLIP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms