RNA–Protein interactions for RNA: ENST00000556071.5

LINC00871-202, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-202ENST00000556071 TREM1Q9NP99 234 aa1.28□□□□□ -2.2
LINC00871-202ENST00000556071 NRBP2Q9NSY0 501 aa1.28□□□□□ -2.2
LINC00871-202ENST00000556071 HDGFL3Q9Y3E1 203 aa1.28□□□□□ -2.2
LINC00871-202ENST00000556071 SOX21Q9Y651 276 aaPredicted RBP1.28□□□□□ -2.2
LINC00871-202ENST00000556071 THSD7AQ9UPZ6 1657 aa1.28□□□□□ -2.2
LINC00871-202ENST00000556071 SIPA1L1O43166 1804 aa1.28□□□□□ -2.2
LINC00871-202ENST00000556071 LINC00614P0C842 121 aa1.27□□□□□ -2.21
LINC00871-202ENST00000556071 TMEM33P57088 247 aa1.27□□□□□ -2.21
LINC00871-202ENST00000556071 GNA13Q14344 377 aa1.27□□□□□ -2.21
LINC00871-202ENST00000556071 LRRC26Q2I0M4 334 aa1.27□□□□□ -2.21
LINC00871-202ENST00000556071 CRLF3Q8IUI8 442 aa1.27□□□□□ -2.21
LINC00871-202ENST00000556071 RIBC1Q8N443 379 aaPredicted RBP1.27□□□□□ -2.21
LINC00871-202ENST00000556071 SPERTQ8NA61 448 aa1.27□□□□□ -2.21
LINC00871-202ENST00000556071 OR1L8Q8NGR8 309 aa1.27□□□□□ -2.21
LINC00871-202ENST00000556071 OR13C8Q8NGS7 320 aa1.27□□□□□ -2.21
LINC00871-202ENST00000556071 OR10D3Q8NH80 312 aa1.27□□□□□ -2.21
LINC00871-202ENST00000556071 MS4A6EQ96DS6 147 aa1.27□□□□□ -2.21
LINC00871-202ENST00000556071 RBP7Q96R05 134 aa1.27□□□□□ -2.21
LINC00871-202ENST00000556071 NMNAT3Q96T66 252 aa1.27□□□□□ -2.21
LINC00871-202ENST00000556071 TMEM222Q9H0R3 208 aa1.27□□□□□ -2.21
LINC00871-202ENST00000556071 NAV1Q8NEY1 1877 aa1.26□□□□□ -2.21
LINC00871-202ENST00000556071 A0A087WUU8 490 aa1.26□□□□□ -2.21
LINC00871-202ENST00000556071 IGKV3D-7A0A0C4DH55 119 aa1.26□□□□□ -2.21
LINC00871-202ENST00000556071 IGKV3OR2-268A0A0C4DH90 116 aa1.26□□□□□ -2.21
LINC00871-202ENST00000556071 AZIN1O14977 448 aa1.26□□□□□ -2.21
LINC00871-202ENST00000556071 YKT6O15498 198 aa1.26□□□□□ -2.21
LINC00871-202ENST00000556071 NNATQ16517 81 aa1.26□□□□□ -2.21
LINC00871-202ENST00000556071 SLC36A2Q495M3 483 aa1.26□□□□□ -2.21
LINC00871-202ENST00000556071 DNAL1Q4LDG9 190 aa1.26□□□□□ -2.21
LINC00871-202ENST00000556071 UNQ6190/PRO20217Q6UXQ8 127 aa1.26□□□□□ -2.21
LINC00871-202ENST00000556071 OR5L1Q8NGL2 311 aa1.26□□□□□ -2.21
LINC00871-202ENST00000556071 OR52A5Q9H2C5 316 aa1.26□□□□□ -2.21
LINC00871-202ENST00000556071 HEATR5AQ86XA9 2040 aa1.26□□□□□ -2.21
LINC00871-202ENST00000556071 REREQ9P2R6 1566 aa1.25□□□□□ -2.21
LINC00871-202ENST00000556071 MED12LQ86YW9 2145 aa1.25□□□□□ -2.21
LINC00871-202ENST00000556071 LRPPRCP42704 1394 aaKnown RBP1.25□□□□□ -2.21
LINC00871-202ENST00000556071 IGKV2-40A0A087WW87 121 aaPredicted RBP1.25□□□□□ -2.21
LINC00871-202ENST00000556071 OR6C6A6NF89 314 aa1.25□□□□□ -2.21
LINC00871-202ENST00000556071 F8VZ95 297 aa1.25□□□□□ -2.21
LINC00871-202ENST00000556071 KLRC4O43908 158 aa1.25□□□□□ -2.21
LINC00871-202ENST00000556071 ATP6V1G2O95670 118 aa1.25□□□□□ -2.21
LINC00871-202ENST00000556071 IGKV2D-40P01614 121 aaPredicted RBP1.25□□□□□ -2.21
LINC00871-202ENST00000556071 MIPP30301 263 aa1.25□□□□□ -2.21
LINC00871-202ENST00000556071 HLA-DRB5Q30154 266 aa1.25□□□□□ -2.21
LINC00871-202ENST00000556071 LYZL1Q6UWQ5 148 aa1.25□□□□□ -2.21
LINC00871-202ENST00000556071 KTN1-AS1Q86SY8 53 aa1.25□□□□□ -2.21
LINC00871-202ENST00000556071 ZNF675Q8TD23 568 aa1.25□□□□□ -2.21
LINC00871-202ENST00000556071 DOHHQ9BU89 302 aa1.25□□□□□ -2.21
LINC00871-202ENST00000556071 PCYT1BQ9Y5K3 369 aaPredicted RBP1.25□□□□□ -2.21
LINC00871-202ENST00000556071 GREB1Q4ZG55 1949 aa1.25□□□□□ -2.21
LINC00871-202ENST00000556071 MT-CO2P00403 227 aa1.24□□□□□ -2.21
LINC00871-202ENST00000556071 CXCL2P19875 107 aa1.24□□□□□ -2.21
LINC00871-202ENST00000556071 CXCL3P19876 107 aa1.24□□□□□ -2.21
LINC00871-202ENST00000556071 TBPL1P62380 186 aa1.24□□□□□ -2.21
LINC00871-202ENST00000556071 FABP5Q01469 135 aa1.24□□□□□ -2.21
LINC00871-202ENST00000556071 PMS2P3Q13401 168 aa1.24□□□□□ -2.21
LINC00871-202ENST00000556071 KRTAP5-10Q6L8G5 202 aa1.24□□□□□ -2.21
LINC00871-202ENST00000556071 LFNGQ8NES3 379 aa1.24□□□□□ -2.21
LINC00871-202ENST00000556071 SLC7A6Q92536 515 aa1.24□□□□□ -2.21
LINC00871-202ENST00000556071 LRRC45Q96CN5 670 aa1.24□□□□□ -2.21
LINC00871-202ENST00000556071 CIAO1O76071 339 aa1.23□□□□□ -2.21
LINC00871-202ENST00000556071 CRPP02741 224 aa1.23□□□□□ -2.21
LINC00871-202ENST00000556071 AKR1C3P42330 323 aa1.23□□□□□ -2.21
LINC00871-202ENST00000556071 ANGPT1Q15389 498 aa1.23□□□□□ -2.21
LINC00871-202ENST00000556071 MIAQ16674 131 aa1.23□□□□□ -2.21
LINC00871-202ENST00000556071 ZNF705AQ6ZN79 300 aaPredicted RBP1.23□□□□□ -2.21
LINC00871-202ENST00000556071 FP248Q71RG6 208 aaPredicted RBP1.23□□□□□ -2.21
LINC00871-202ENST00000556071 C12orf43Q96C57 262 aaKnown RBP1.23□□□□□ -2.21
LINC00871-202ENST00000556071 NSRP1Q9H0G5 558 aaKnown RBP1.23□□□□□ -2.21
LINC00871-202ENST00000556071 RBM7Q9Y580 266 aaKnown RBP1.23□□□□□ -2.21
LINC00871-202ENST00000556071 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
LINC00871-202ENST00000556071 MEIKINA0A087WXM9 373 aa1.22□□□□□ -2.21
LINC00871-202ENST00000556071 CCRL2O00421 344 aa1.22□□□□□ -2.21
LINC00871-202ENST00000556071 TOX3O15405 576 aaPredicted RBP1.22□□□□□ -2.21
LINC00871-202ENST00000556071 HLA-DQB2P05538 268 aa1.22□□□□□ -2.21
LINC00871-202ENST00000556071 DEFA4P12838 97 aa1.22□□□□□ -2.21
LINC00871-202ENST00000556071 CA5AP35218 305 aa1.22□□□□□ -2.21
LINC00871-202ENST00000556071 CLDN12P56749 244 aa1.22□□□□□ -2.21
LINC00871-202ENST00000556071 FXYD7P58549 80 aa1.22□□□□□ -2.21
LINC00871-202ENST00000556071 HOXC5Q00444 222 aa1.22□□□□□ -2.21
LINC00871-202ENST00000556071 IMMP2LQ96T52 175 aa1.22□□□□□ -2.21
LINC00871-202ENST00000556071 TMEM109Q9BVC6 243 aa1.22□□□□□ -2.21
LINC00871-202ENST00000556071 CST9LQ9H4G1 147 aa1.22□□□□□ -2.21
LINC00871-202ENST00000556071 TP53TG1Q9Y2A0 90 aa1.22□□□□□ -2.21
LINC00871-202ENST00000556071 RP1P56715 2156 aa1.22□□□□□ -2.21
LINC00871-202ENST00000556071 IGKV3-7A0A075B6H7 116 aa1.21□□□□□ -2.22
LINC00871-202ENST00000556071 IGHV1-18A0A0C4DH31 117 aa1.21□□□□□ -2.22
LINC00871-202ENST00000556071 HMSDA8MTL9 139 aa1.21□□□□□ -2.22
LINC00871-202ENST00000556071 C9JCJ5 164 aa1.21□□□□□ -2.22
LINC00871-202ENST00000556071 FTCDNL1E5RQL4 147 aa1.21□□□□□ -2.22
LINC00871-202ENST00000556071 F8W036 122 aa1.21□□□□□ -2.22
LINC00871-202ENST00000556071 ORM1P02763 201 aa1.21□□□□□ -2.22
LINC00871-202ENST00000556071 CD79BP40259 229 aa1.21□□□□□ -2.22
LINC00871-202ENST00000556071 AQP4P55087 323 aa1.21□□□□□ -2.22
LINC00871-202ENST00000556071 PRB3Q04118 309 aaPredicted RBP1.21□□□□□ -2.22
LINC00871-202ENST00000556071 GPHB5Q86YW7 130 aa1.21□□□□□ -2.22
LINC00871-202ENST00000556071 TIMM9Q9Y5J7 89 aa1.21□□□□□ -2.22
LINC00871-202ENST00000556071 RIMS2Q9UQ26 1411 aa1.21□□□□□ -2.22
LINC00871-202ENST00000556071 ABCC12Q96J65 1359 aa1.21□□□□□ -2.22
LINC00871-202ENST00000556071 NOTCH1P46531 2555 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms