RNA–Protein interactions for RNA: ENST00000555958.5

ATXN3-234, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-234ENST00000555958 CNTFRP26992 372 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 NAA10P41227 235 aaPredicted RBP2.71□□□□□ -1.98
ATXN3-234ENST00000555958 RBM34P42696 430 aaKnown RBP2.71□□□□□ -1.98
ATXN3-234ENST00000555958 RAP1BP61224 184 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 HERVK_113P61574 105 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 RAP1AP62834 184 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 CBX1P83916 185 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 BDH1Q02338 343 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 PRDX4Q13162 271 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 HES1Q14469 280 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 EDDM3AQ14507 147 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 TATDN3Q17R31 274 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 FAM74A3Q4VXF1 159 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 FAM27D1Q5T7N8 215 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 PRAMEF5Q5TYX0 476 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 DCXRQ7Z4W1 244 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 ZNF429Q86V71 674 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 STPG2Q8N412 459 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 ZNF676Q8N7Q3 588 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 OR11H6Q8NGC7 330 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 OR4P4Q8NGL7 312 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 OR13D1Q8NGV5 346 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 OR4K13Q8NH42 304 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 OR5K1Q8NHB7 308 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 TRMT10AQ8TBZ6 339 aaKnown RBP2.71□□□□□ -1.98
ATXN3-234ENST00000555958 ARPC1AQ92747 370 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 LEAP2Q969E1 77 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 C12orf43Q96C57 262 aaKnown RBP2.71□□□□□ -1.98
ATXN3-234ENST00000555958 REEP6Q96HR9 211 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 TPD52L3Q96J77 140 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 RNF170Q96K19 258 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 NMNAT3Q96T66 252 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 TMED9Q9BVK6 235 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 POLR2J2Q9GZM3 115 aaKnown RBP2.71□□□□□ -1.98
ATXN3-234ENST00000555958 CHST6Q9GZX3 395 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 SLC22A4Q9H015 551 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 MAGT1Q9H0U3 335 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 POLR2J3Q9H1A7 115 aaKnown RBP2.71□□□□□ -1.98
ATXN3-234ENST00000555958 WFDC10AQ9H1F0 79 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 TLNRD1Q9H1K6 362 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 TMEM38AQ9H6F2 299 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 NMNAT1Q9HAN9 279 aaPredicted RBP2.71□□□□□ -1.98
ATXN3-234ENST00000555958 RPRD1BQ9NQG5 326 aaKnown RBP2.71□□□□□ -1.98
ATXN3-234ENST00000555958 USE1Q9NZ43 259 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 STX18Q9P2W9 335 aaKnown RBP2.71□□□□□ -1.98
ATXN3-234ENST00000555958 ZMAT5Q9UDW3 170 aaKnown RBP2.71□□□□□ -1.98
ATXN3-234ENST00000555958 RABL2BQ9UNT1 228 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 TBL2Q9Y4P3 447 aaKnown RBP2.71□□□□□ -1.98
ATXN3-234ENST00000555958 DNAH2Q9P225 4427 aa2.71□□□□□ -1.98
ATXN3-234ENST00000555958 DSCAML1Q8TD84 2053 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 FAT2Q9NYQ8 4349 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 MUC4Q99102 2169 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 IGHV3-72A0A0B4J1Y9 119 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 SPRR5A0A1B0GTR4 108 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 RNF222A6NCQ9 220 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 EVPLLA8MZ36 301 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 UBDO15205 165 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 SNAPINO95295 136 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 GYPBP06028 91 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 PGA5P0DJD9 388 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 ZNF728P0DKX0 622 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 TROVE2P10155 538 aaKnown RBP eCLIP2.7□□□□□ -1.98
ATXN3-234ENST00000555958 CLUP10909 449 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 ANXA3P12429 323 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 IDO1P14902 403 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 HIST1H1CP16403 213 aaKnown RBP2.7□□□□□ -1.98
ATXN3-234ENST00000555958 GPX2P18283 190 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 CX3CR1P49238 355 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 DYNLT3P51808 116 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 PAX5Q02548 391 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 PRKCDQ05655 676 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 TNFRSF9Q07011 255 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 KIR2DS1Q14954 304 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 PTGES3Q15185 160 aaKnown RBP2.7□□□□□ -1.98
ATXN3-234ENST00000555958 ZBED5Q49AG3 693 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 LCN8Q6JVE9 175 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 HAGHLQ6PII5 290 aaPredicted RBP2.7□□□□□ -1.98
ATXN3-234ENST00000555958 CCDC80Q76M96 950 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 SLC35E3Q7Z769 313 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 VTCN1Q7Z7D3 282 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 IFT20Q8IY31 132 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 C5orf56Q8N8D9 126 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 ASCC1Q8N9N2 400 aaKnown RBP2.7□□□□□ -1.98
ATXN3-234ENST00000555958 CYB561A3Q8NBI2 242 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 OR8U1Q8NH10 309 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 OR10A6Q8NH74 314 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 OR56B4Q8NH76 319 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 OR5P3Q8WZ94 311 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 SPTSSAQ969W0 71 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 SLAMF6Q96DU3 332 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 SDSLQ96GA7 329 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 C4orf36Q96KX1 117 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 ERMAPQ96PL5 475 aaPredicted RBP2.7□□□□□ -1.98
ATXN3-234ENST00000555958 OR8B4Q96RC9 309 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 AMELYQ99218 206 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 MICU1Q9BPX6 476 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 HSPB9Q9BQS6 159 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 COPS4Q9BT78 406 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 DNTTIP1Q9H147 329 aa2.7□□□□□ -1.98
ATXN3-234ENST00000555958 TMEM133Q9H2Q1 129 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms