RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, human

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-223	ENST00000555904	LINC00205	P59089	165 aa		10.05	□□□□□ -0.8
ABCD4-223	ENST00000555904	UBE2M	P61081	183 aa	Known RBP	10.05	□□□□□ -0.8
ABCD4-223	ENST00000555904	RPL30	P62888	115 aa	Known RBP	10.05	□□□□□ -0.8
ABCD4-223	ENST00000555904	EIF4EBP1	Q13541	118 aa	Predicted RBP	10.05	□□□□□ -0.8
ABCD4-223	ENST00000555904	HNF4G	Q14541	408 aa		10.05	□□□□□ -0.8
ABCD4-223	ENST00000555904	LY6E	Q16553	131 aa		10.05	□□□□□ -0.8
ABCD4-223	ENST00000555904	NRARP	Q7Z6K4	114 aa		10.05	□□□□□ -0.8
ABCD4-223	ENST00000555904	ADAD2	Q8NCV1	583 aa	Known RBP	10.05	□□□□□ -0.8
ABCD4-223	ENST00000555904	OR8H1	Q8NGG4	311 aa		10.05	□□□□□ -0.8
ABCD4-223	ENST00000555904	DDB2	Q92466	427 aa		10.05	□□□□□ -0.8
ABCD4-223	ENST00000555904	HARBI1	Q96MB7	349 aa		10.05	□□□□□ -0.8
ABCD4-223	ENST00000555904	TSNAX	Q99598	290 aa	Known RBP	10.05	□□□□□ -0.8
ABCD4-223	ENST00000555904	NAA60	Q9H7X0	242 aa		10.05	□□□□□ -0.8
ABCD4-223	ENST00000555904	C1RL	Q9NZP8	487 aa		10.05	□□□□□ -0.8
ABCD4-223	ENST00000555904	KIAA1456	Q9P272	454 aa		10.05	□□□□□ -0.8
ABCD4-223	ENST00000555904	DNAJC9-AS1	A6NH13	148 aa		10.04	□□□□□ -0.8
ABCD4-223	ENST00000555904	FAM90A9P	A6NNJ1	464 aa		10.04	□□□□□ -0.8
ABCD4-223	ENST00000555904	NCBP2L	A6PVI3	153 aa	Known RBP	10.04	□□□□□ -0.8
ABCD4-223	ENST00000555904		M0QZK8	103 aa		10.04	□□□□□ -0.8
ABCD4-223	ENST00000555904	PEX14	O75381	377 aa		10.04	□□□□□ -0.8
ABCD4-223	ENST00000555904	ATG12	O94817	140 aa		10.04	□□□□□ -0.8
ABCD4-223	ENST00000555904	IGKV1-16	P04430	117 aa		10.04	□□□□□ -0.8
ABCD4-223	ENST00000555904	H2AFB2	P0C5Z0	115 aa		10.04	□□□□□ -0.8
ABCD4-223	ENST00000555904	HILS1	P60008	231 aa		10.04	□□□□□ -0.8
ABCD4-223	ENST00000555904	ERVK-16	P61578	105 aa		10.04	□□□□□ -0.8
ABCD4-223	ENST00000555904	RPS16	P62249	146 aa	Known RBP	10.04	□□□□□ -0.8
ABCD4-223	ENST00000555904	SRPX	P78539	464 aa		10.04	□□□□□ -0.8
ABCD4-223	ENST00000555904	PLGLA	Q15195	96 aa		10.04	□□□□□ -0.8
ABCD4-223	ENST00000555904	MMD	Q15546	238 aa		10.04	□□□□□ -0.8
ABCD4-223	ENST00000555904	TUSC1	Q2TAM9	212 aa		10.04	□□□□□ -0.8
ABCD4-223	ENST00000555904	TRIM16L	Q309B1	348 aa		10.04	□□□□□ -0.8
ABCD4-223	ENST00000555904	C4orf46	Q504U0	113 aa		10.04	□□□□□ -0.8
ABCD4-223	ENST00000555904	C16orf82	Q7Z2V1	217 aa		10.04	□□□□□ -0.8
ABCD4-223	ENST00000555904	DUSP18	Q8NEJ0	188 aa		10.04	□□□□□ -0.8
ABCD4-223	ENST00000555904	OSR1	Q8TAX0	266 aa	Predicted RBP	10.04	□□□□□ -0.8
ABCD4-223	ENST00000555904	EAF1	Q96JC9	268 aa	Predicted RBP	10.04	□□□□□ -0.8
ABCD4-223	ENST00000555904	RNF5	Q99942	180 aa		10.04	□□□□□ -0.8
ABCD4-223	ENST00000555904	FAM212B	Q9NTI7	297 aa	Predicted RBP	10.04	□□□□□ -0.8
ABCD4-223	ENST00000555904	TLN2	Q9Y4G6	2542 aa		10.04	□□□□□ -0.8
ABCD4-223	ENST00000555904	CLDN34	H7C241	214 aa		10.03	□□□□□ -0.8
ABCD4-223	ENST00000555904	RAMP3	O60896	148 aa		10.03	□□□□□ -0.8
ABCD4-223	ENST00000555904	OR2F2	O95006	317 aa		10.03	□□□□□ -0.8
ABCD4-223	ENST00000555904	HPRT1	P00492	218 aa		10.03	□□□□□ -0.8
ABCD4-223	ENST00000555904	HRAS	P01112	189 aa		10.03	□□□□□ -0.8
ABCD4-223	ENST00000555904	HLA-A	P01891	365 aa	Known RBP	10.03	□□□□□ -0.8
ABCD4-223	ENST00000555904	OR5AC1	P0C628	307 aa		10.03	□□□□□ -0.8
ABCD4-223	ENST00000555904	RPA2	P15927	270 aa		10.03	□□□□□ -0.8
ABCD4-223	ENST00000555904	ANXA7	P20073	488 aa	Known RBP	10.03	□□□□□ -0.8
ABCD4-223	ENST00000555904	LGALS7	P47929	136 aa		10.03	□□□□□ -0.8
ABCD4-223	ENST00000555904	DHODH	Q02127	395 aa		10.03	□□□□□ -0.8
ABCD4-223	ENST00000555904	EBI3	Q14213	229 aa		10.03	□□□□□ -0.8
ABCD4-223	ENST00000555904	SLC9A3R2	Q15599	337 aa		10.03	□□□□□ -0.8
ABCD4-223	ENST00000555904	SLC25A42	Q86VD7	318 aa		10.03	□□□□□ -0.8
ABCD4-223	ENST00000555904	TMEM219	Q86XT9	240 aa		10.03	□□□□□ -0.8
ABCD4-223	ENST00000555904	RBM14	Q96PK6	669 aa	Known RBP	10.03	□□□□□ -0.8
ABCD4-223	ENST00000555904	DUX5	Q96PT3	197 aa		10.03	□□□□□ -0.8
ABCD4-223	ENST00000555904	SLC25A33	Q9BSK2	321 aa		10.03	□□□□□ -0.8
ABCD4-223	ENST00000555904	TMEM222	Q9H0R3	208 aa		10.03	□□□□□ -0.8
ABCD4-223	ENST00000555904	PLEKHA2	Q9HB19	425 aa		10.03	□□□□□ -0.8
ABCD4-223	ENST00000555904	COMMD9	Q9P000	198 aa		10.03	□□□□□ -0.8
ABCD4-223	ENST00000555904	FLVCR2	Q9UPI3	526 aa		10.03	□□□□□ -0.8
ABCD4-223	ENST00000555904	MOB4	Q9Y3A3	225 aa		10.03	□□□□□ -0.8
ABCD4-223	ENST00000555904		A6NDX4	124 aa		10.02	□□□□□ -0.81
ABCD4-223	ENST00000555904	NBR2	O15453	112 aa		10.02	□□□□□ -0.81
ABCD4-223	ENST00000555904	CREBL2	O60519	120 aa	Predicted RBP	10.02	□□□□□ -0.81
ABCD4-223	ENST00000555904	SPDEF	O95238	335 aa		10.02	□□□□□ -0.81
ABCD4-223	ENST00000555904	DHFR	P00374	187 aa		10.02	□□□□□ -0.81
ABCD4-223	ENST00000555904	OR4E1	P0C645	316 aa		10.02	□□□□□ -0.81
ABCD4-223	ENST00000555904	LPAR6	P43657	344 aa		10.02	□□□□□ -0.81
ABCD4-223	ENST00000555904	RAB25	P57735	213 aa		10.02	□□□□□ -0.81
ABCD4-223	ENST00000555904	SP6	Q3SY56	376 aa		10.02	□□□□□ -0.81
ABCD4-223	ENST00000555904	VMA21	Q3ZAQ7	101 aa		10.02	□□□□□ -0.81
ABCD4-223	ENST00000555904	TMEM177	Q53S58	311 aa		10.02	□□□□□ -0.81
ABCD4-223	ENST00000555904	DMBX1	Q8NFW5	382 aa		10.02	□□□□□ -0.81
ABCD4-223	ENST00000555904	RNASE11	Q8TAA1	199 aa	Known RBP	10.02	□□□□□ -0.81
ABCD4-223	ENST00000555904	VSTM2A	Q8TAG5	236 aa		10.02	□□□□□ -0.81
ABCD4-223	ENST00000555904	PIFO	Q8TCI5	191 aa		10.02	□□□□□ -0.81
ABCD4-223	ENST00000555904	ZFAND2B	Q8WV99	257 aa		10.02	□□□□□ -0.81
ABCD4-223	ENST00000555904	TMEM230	Q96A57	120 aa		10.02	□□□□□ -0.81
ABCD4-223	ENST00000555904	GALNT14	Q96FL9	552 aa		10.02	□□□□□ -0.81
ABCD4-223	ENST00000555904	TP53RK	Q96S44	253 aa		10.02	□□□□□ -0.81
ABCD4-223	ENST00000555904	CHIA	Q9BZP6	476 aa		10.02	□□□□□ -0.81
ABCD4-223	ENST00000555904	SVEP1	Q4LDE5	3571 aa		10.02	□□□□□ -0.81
ABCD4-223	ENST00000555904	TRIM77	I1YAP6	450 aa		10.01	□□□□□ -0.81
ABCD4-223	ENST00000555904	S1PR2	O95136	353 aa		10.01	□□□□□ -0.81
ABCD4-223	ENST00000555904	CRYBA1	P05813	215 aa		10.01	□□□□□ -0.81
ABCD4-223	ENST00000555904	NQO2	P16083	231 aa		10.01	□□□□□ -0.81
ABCD4-223	ENST00000555904	UCP1	P25874	307 aa		10.01	□□□□□ -0.81
ABCD4-223	ENST00000555904	AKR1C2	P52895	323 aa		10.01	□□□□□ -0.81
ABCD4-223	ENST00000555904	RAG2	P55895	527 aa		10.01	□□□□□ -0.81
ABCD4-223	ENST00000555904	PPP1R1A	Q13522	171 aa		10.01	□□□□□ -0.81
ABCD4-223	ENST00000555904	ZNF695	Q8IW36	515 aa		10.01	□□□□□ -0.81
ABCD4-223	ENST00000555904		Q8N6K4	173 aa		10.01	□□□□□ -0.81
ABCD4-223	ENST00000555904	CASTOR1	Q8WTX7	329 aa		10.01	□□□□□ -0.81
ABCD4-223	ENST00000555904	R3HDM4	Q96D70	268 aa		10.01	□□□□□ -0.81
ABCD4-223	ENST00000555904	RHOV	Q96L33	236 aa		10.01	□□□□□ -0.81
ABCD4-223	ENST00000555904	RASL11B	Q9BPW5	248 aa		10.01	□□□□□ -0.81
ABCD4-223	ENST00000555904	NPFFR1	Q9GZQ6	430 aa		10.01	□□□□□ -0.81
ABCD4-223	ENST00000555904	ALX4	Q9H161	411 aa	Predicted RBP	10.01	□□□□□ -0.81
ABCD4-223	ENST00000555904	BEX1	Q9HBH7	125 aa		10.01	□□□□□ -0.81

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