RNA–Protein interactions for RNA: ENST00000555116.5

SHMT2-217, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-217ENST00000555116 EAF1Q96JC9 268 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-217ENST00000555116 AKR1E2Q96JD6 320 aa11.33□□□□□ -0.6
SHMT2-217ENST00000555116 HYLS1Q96M11 299 aa11.33□□□□□ -0.6
SHMT2-217ENST00000555116 NABP2Q9BQ15 211 aa11.33□□□□□ -0.6
SHMT2-217ENST00000555116 TINAGL1Q9GZM7 467 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-217ENST00000555116 GPN1Q9HCN4 374 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-217ENST00000555116 PIPOXQ9P0Z9 390 aa11.33□□□□□ -0.6
SHMT2-217ENST00000555116 SNRPGP15A8MWD9 76 aa11.32□□□□□ -0.6
SHMT2-217ENST00000555116 RAB29O14966 203 aa11.32□□□□□ -0.6
SHMT2-217ENST00000555116 ZNF735P0CB33 412 aa11.32□□□□□ -0.6
SHMT2-217ENST00000555116 VSIG10L2P0DP72 767 aa11.32□□□□□ -0.6
SHMT2-217ENST00000555116 SRSF4Q08170 494 aaKnown RBP11.32□□□□□ -0.6
SHMT2-217ENST00000555116 RPL39P5Q59GN2 51 aa11.32□□□□□ -0.6
SHMT2-217ENST00000555116 SHISA2Q6UWI4 295 aa11.32□□□□□ -0.6
SHMT2-217ENST00000555116 OR10J5Q8NHC4 309 aa11.32□□□□□ -0.6
SHMT2-217ENST00000555116 OR2T6Q8NHC8 308 aa11.32□□□□□ -0.6
SHMT2-217ENST00000555116 RBMXL1Q96E39 390 aaKnown RBP11.32□□□□□ -0.6
SHMT2-217ENST00000555116 SERTAD4Q9NUC0 356 aa11.32□□□□□ -0.6
SHMT2-217ENST00000555116 RNF150Q9ULK6 438 aa11.32□□□□□ -0.6
SHMT2-217ENST00000555116 MOB4Q9Y3A3 225 aa11.32□□□□□ -0.6
SHMT2-217ENST00000555116 HAX1O00165 279 aa11.32□□□□□ -0.6
SHMT2-217ENST00000555116 CREBL2O60519 120 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-217ENST00000555116 PROP1O75360 226 aa11.32□□□□□ -0.6
SHMT2-217ENST00000555116 RLN1P04808 185 aa11.32□□□□□ -0.6
SHMT2-217ENST00000555116 LAMTOR1Q6IAA8 161 aa11.32□□□□□ -0.6
SHMT2-217ENST00000555116 H1FOOQ8IZA3 346 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-217ENST00000555116 OR2T10Q8NGZ9 312 aa11.32□□□□□ -0.6
SHMT2-217ENST00000555116 C11orf88Q6PI97 169 aa11.31□□□□□ -0.6
SHMT2-217ENST00000555116 HOGA1Q86XE5 327 aa11.31□□□□□ -0.6
SHMT2-217ENST00000555116 GVQW1Q8N7I0 195 aa11.31□□□□□ -0.6
SHMT2-217ENST00000555116 S1PR3Q99500 378 aa11.31□□□□□ -0.6
SHMT2-217ENST00000555116 ZNF436Q9C0F3 470 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-217ENST00000555116 ANXA10Q9UJ72 324 aa11.31□□□□□ -0.6
SHMT2-217ENST00000555116 SH2D7A6NKC9 451 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-217ENST00000555116 M0QZK8 103 aa11.3□□□□□ -0.6
SHMT2-217ENST00000555116 MOSP00540 346 aa11.3□□□□□ -0.6
SHMT2-217ENST00000555116 CT45A6P0DMU7 189 aa11.3□□□□□ -0.6
SHMT2-217ENST00000555116 CT45A5P0DMU8 189 aa11.3□□□□□ -0.6
SHMT2-217ENST00000555116 CT45A7P0DMV0 189 aa11.3□□□□□ -0.6
SHMT2-217ENST00000555116 MEF2DQ14814 521 aa11.3□□□□□ -0.6
SHMT2-217ENST00000555116 ABCA11PQ4W5N1 156 aa11.3□□□□□ -0.6
SHMT2-217ENST00000555116 IDO2Q6ZQW0 420 aa11.3□□□□□ -0.6
SHMT2-217ENST00000555116 C5orf56Q8N8D9 126 aa11.3□□□□□ -0.6
SHMT2-217ENST00000555116 CITED1Q99966 193 aa11.3□□□□□ -0.6
SHMT2-217ENST00000555116 SLC25A21Q9BQT8 299 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-217ENST00000555116 ALX4Q9H161 411 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-217ENST00000555116 FGF16O43320 207 aa11.29□□□□□ -0.6
SHMT2-217ENST00000555116 CTXN2P0C2S0 81 aa11.29□□□□□ -0.6
SHMT2-217ENST00000555116 OR8U9P0C7N5 309 aa11.29□□□□□ -0.6
SHMT2-217ENST00000555116 TMEM95Q3KNT9 176 aa11.29□□□□□ -0.6
SHMT2-217ENST00000555116 C9orf62Q8N4C0 152 aa11.29□□□□□ -0.6
SHMT2-217ENST00000555116 OR52B4Q8NGK2 314 aa11.29□□□□□ -0.6
SHMT2-217ENST00000555116 OR8U1Q8NH10 309 aa11.29□□□□□ -0.6
SHMT2-217ENST00000555116 GON7Q9BXV9 100 aa11.29□□□□□ -0.6
SHMT2-217ENST00000555116 IFT46Q9NQC8 304 aa11.29□□□□□ -0.6
SHMT2-217ENST00000555116 SCP2D1Q9UJQ7 156 aa11.29□□□□□ -0.6
SHMT2-217ENST00000555116 GAB2Q9UQC2 676 aa11.29□□□□□ -0.6
SHMT2-217ENST00000555116 PLXNB1O43157 2135 aa11.29□□□□□ -0.6
SHMT2-217ENST00000555116 DISC1C4P0D8 188 aa11.29□□□□□ -0.6
SHMT2-217ENST00000555116 CBX5P45973 191 aa11.29□□□□□ -0.6
SHMT2-217ENST00000555116 GPR12P47775 334 aa11.29□□□□□ -0.6
SHMT2-217ENST00000555116 RNASE10Q5GAN6 216 aaKnown RBP11.29□□□□□ -0.6
SHMT2-217ENST00000555116 KLHDC1Q8N7A1 406 aa11.29□□□□□ -0.6
SHMT2-217ENST00000555116 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-217ENST00000555116 OR11H4Q8NGC9 324 aa11.29□□□□□ -0.6
SHMT2-217ENST00000555116 SNAPC3Q92966 411 aa11.29□□□□□ -0.6
SHMT2-217ENST00000555116 C5orf30Q96GV9 206 aa11.29□□□□□ -0.6
SHMT2-217ENST00000555116 WNT10AQ9GZT5 417 aa11.29□□□□□ -0.6
SHMT2-217ENST00000555116 SLC2A8Q9NY64 477 aa11.29□□□□□ -0.6
SHMT2-217ENST00000555116 MGAT4CQ9UBM8 478 aa11.29□□□□□ -0.6
SHMT2-217ENST00000555116 ANAPC10Q9UM13 185 aa11.29□□□□□ -0.6
SHMT2-217ENST00000555116 HSPB11Q9Y547 144 aa11.29□□□□□ -0.6
SHMT2-217ENST00000555116 Q8N9W7 124 aa11.28□□□□□ -0.6
SHMT2-217ENST00000555116 OR5AN1Q8NGI8 311 aa11.28□□□□□ -0.6
SHMT2-217ENST00000555116 OR13C8Q8NGS7 320 aa11.28□□□□□ -0.6
SHMT2-217ENST00000555116 ZNF431Q8TF32 576 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-217ENST00000555116 WIPF2Q8TF74 440 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-217ENST00000555116 RITA1Q96K30 269 aa11.28□□□□□ -0.6
SHMT2-217ENST00000555116 PRRT1Q99946 306 aa11.28□□□□□ -0.6
SHMT2-217ENST00000555116 OR2D2Q9H210 308 aa11.28□□□□□ -0.6
SHMT2-217ENST00000555116 WNK1Q9H4A3 2382 aa11.28□□□□□ -0.6
SHMT2-217ENST00000555116 TET2Q6N021 2002 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-217ENST00000555116 G3V3Q6 166 aa11.27□□□□□ -0.6
SHMT2-217ENST00000555116 H0YJW9 148 aa11.27□□□□□ -0.6
SHMT2-217ENST00000555116 NAT1P18440 290 aa11.27□□□□□ -0.6
SHMT2-217ENST00000555116 TBPP20226 339 aa11.27□□□□□ -0.6
SHMT2-217ENST00000555116 NFYAP23511 347 aaPredicted RBP11.27□□□□□ -0.6
SHMT2-217ENST00000555116 HRH1P35367 487 aa11.27□□□□□ -0.6
SHMT2-217ENST00000555116 VDAC2P45880 294 aaPredicted RBP11.27□□□□□ -0.6
SHMT2-217ENST00000555116 F2RL1P55085 397 aa11.27□□□□□ -0.6
SHMT2-217ENST00000555116 SCGB2B2Q4G0G5 96 aa11.27□□□□□ -0.6
SHMT2-217ENST00000555116 OR8H1Q8NGG4 311 aa11.27□□□□□ -0.6
SHMT2-217ENST00000555116 OR2T35Q8NGX2 323 aa11.27□□□□□ -0.6
SHMT2-217ENST00000555116 SDHAF2Q9NX18 166 aa11.27□□□□□ -0.6
SHMT2-217ENST00000555116 OR2W1Q9Y3N9 320 aa11.27□□□□□ -0.6
SHMT2-217ENST00000555116 OR5H14A6NHG9 310 aa11.27□□□□□ -0.61
SHMT2-217ENST00000555116 NCBP2LA6PVI3 153 aaKnown RBP11.27□□□□□ -0.61
SHMT2-217ENST00000555116 TUSC2O75896 110 aa11.27□□□□□ -0.61
SHMT2-217ENST00000555116 OR2A4O95047 310 aa11.27□□□□□ -0.61
SHMT2-217ENST00000555116 LINC00205P59089 165 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms