RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 PF4P02776 101 aa8.37□□□□□ -1.07
SHMT2-215ENST00000554656 HNRNPCP07910 306 aaKnown RBP eCLIP8.37□□□□□ -1.07
SHMT2-215ENST00000554656 SCTP09683 121 aa8.37□□□□□ -1.07
SHMT2-215ENST00000554656 PGAM2P15259 253 aa8.37□□□□□ -1.07
SHMT2-215ENST00000554656 HLA-GP17693 338 aa8.37□□□□□ -1.07
SHMT2-215ENST00000554656 RCC1P18754 421 aaPredicted RBP8.37□□□□□ -1.07
SHMT2-215ENST00000554656 GZMHP20718 246 aa8.37□□□□□ -1.07
SHMT2-215ENST00000554656 FCGR2CP31995 323 aa8.37□□□□□ -1.07
SHMT2-215ENST00000554656 BRS3P32247 399 aa8.37□□□□□ -1.07
SHMT2-215ENST00000554656 DHRS2Q13268 280 aa8.37□□□□□ -1.07
SHMT2-215ENST00000554656 DIAPH2-AS1Q14236 149 aa8.37□□□□□ -1.07
SHMT2-215ENST00000554656 FCN2Q15485 313 aa8.37□□□□□ -1.07
SHMT2-215ENST00000554656 KRBOX4Q5JUW0 171 aa8.37□□□□□ -1.07
SHMT2-215ENST00000554656 C18orf65Q6ZTR6 163 aa8.37□□□□□ -1.07
SHMT2-215ENST00000554656 TMED4Q7Z7H5 227 aa8.37□□□□□ -1.07
SHMT2-215ENST00000554656 H1FOOQ8IZA3 346 aaPredicted RBP8.37□□□□□ -1.07
SHMT2-215ENST00000554656 C12orf45Q8N5I9 185 aaPredicted RBP8.37□□□□□ -1.07
SHMT2-215ENST00000554656 LINC00482Q8N8I6 264 aa8.37□□□□□ -1.07
SHMT2-215ENST00000554656 CCDC71LQ8N9Z2 235 aa8.37□□□□□ -1.07
SHMT2-215ENST00000554656 OR10J5Q8NHC4 309 aa8.37□□□□□ -1.07
SHMT2-215ENST00000554656 LEAP2Q969E1 77 aa8.37□□□□□ -1.07
SHMT2-215ENST00000554656 KIRREL1Q96J84 757 aa8.37□□□□□ -1.07
SHMT2-215ENST00000554656 AKR1E2Q96JD6 320 aa8.37□□□□□ -1.07
SHMT2-215ENST00000554656 SEC22CQ9BRL7 303 aa8.37□□□□□ -1.07
SHMT2-215ENST00000554656 RTBDNQ9BSG5 229 aaPredicted RBP8.37□□□□□ -1.07
SHMT2-215ENST00000554656 RSRP1Q9BUV0 290 aa8.37□□□□□ -1.07
SHMT2-215ENST00000554656 TAF9BQ9HBM6 251 aa8.37□□□□□ -1.07
SHMT2-215ENST00000554656 OR6C3Q9NZP0 311 aa8.37□□□□□ -1.07
SHMT2-215ENST00000554656 KIF25Q9UIL4 384 aa8.37□□□□□ -1.07
SHMT2-215ENST00000554656 KMT2CQ8NEZ4 4911 aaKnown RBP8.37□□□□□ -1.07
SHMT2-215ENST00000554656 TENM3Q9P273 2699 aa8.36□□□□□ -1.07
SHMT2-215ENST00000554656 MEIKINA0A087WXM9 373 aa8.36□□□□□ -1.07
SHMT2-215ENST00000554656 IGKV1-6A0A0C4DH72 117 aa8.36□□□□□ -1.07
SHMT2-215ENST00000554656 A0A1W2PPI3 338 aa8.36□□□□□ -1.07
SHMT2-215ENST00000554656 C9orf170A2RU37 121 aa8.36□□□□□ -1.07
SHMT2-215ENST00000554656 ZNF729A6NN14 1252 aaPredicted RBP8.36□□□□□ -1.07
SHMT2-215ENST00000554656 FAM90A9PA6NNJ1 464 aa8.36□□□□□ -1.07
SHMT2-215ENST00000554656 IGHV3-7P01780 117 aa8.36□□□□□ -1.07
SHMT2-215ENST00000554656 HLA-AP01891 365 aaKnown RBP8.36□□□□□ -1.07
SHMT2-215ENST00000554656 ANXA3P12429 323 aa8.36□□□□□ -1.07
SHMT2-215ENST00000554656 NFYBP25208 207 aa8.36□□□□□ -1.07
SHMT2-215ENST00000554656 HOXD3P31249 432 aaPredicted RBP8.36□□□□□ -1.07
SHMT2-215ENST00000554656 RND3P61587 244 aa8.36□□□□□ -1.07
SHMT2-215ENST00000554656 HTD2P86397 168 aa8.36□□□□□ -1.07
SHMT2-215ENST00000554656 EGFEM1PQ0D2K5 195 aa8.36□□□□□ -1.07
SHMT2-215ENST00000554656 MSMO1Q15800 293 aa8.36□□□□□ -1.07
SHMT2-215ENST00000554656 IGSF11Q5DX21 431 aa8.36□□□□□ -1.07
SHMT2-215ENST00000554656 KHDC1LQ5JSQ8 128 aa8.36□□□□□ -1.07
SHMT2-215ENST00000554656 ZNF329Q86UD4 541 aa8.36□□□□□ -1.07
SHMT2-215ENST00000554656 OR2AK2Q8NG84 335 aa8.36□□□□□ -1.07
SHMT2-215ENST00000554656 OR4X2Q8NGF9 303 aa8.36□□□□□ -1.07
SHMT2-215ENST00000554656 OR13A1Q8NGR1 328 aa8.36□□□□□ -1.07
SHMT2-215ENST00000554656 MITD1Q8WV92 249 aa8.36□□□□□ -1.07
SHMT2-215ENST00000554656 CAPSLQ8WWF8 208 aa8.36□□□□□ -1.07
SHMT2-215ENST00000554656 TMEM230Q96A57 120 aa8.36□□□□□ -1.07
SHMT2-215ENST00000554656 GALMQ96C23 342 aa8.36□□□□□ -1.07
SHMT2-215ENST00000554656 GALNT14Q96FL9 552 aa8.36□□□□□ -1.07
SHMT2-215ENST00000554656 RCC1LQ96I51 464 aaKnown RBP8.36□□□□□ -1.07
SHMT2-215ENST00000554656 MOB4Q9Y3A3 225 aa8.36□□□□□ -1.07
SHMT2-215ENST00000554656 OR2W1Q9Y3N9 320 aa8.36□□□□□ -1.07
SHMT2-215ENST00000554656 DNAH9Q9NYC9 4486 aa8.36□□□□□ -1.07
SHMT2-215ENST00000554656 PIGBOS1A0A0B4J2F0 54 aa8.35□□□□□ -1.07
SHMT2-215ENST00000554656 KBTBD11-OT1A0A1B0GTJ5 212 aa8.35□□□□□ -1.07
SHMT2-215ENST00000554656 CRYM-AS1A6NIL9 109 aa8.35□□□□□ -1.07
SHMT2-215ENST00000554656 OOSP1A8MZH6 123 aa8.35□□□□□ -1.07
SHMT2-215ENST00000554656 C12orf77C9JDV5 145 aa8.35□□□□□ -1.07
SHMT2-215ENST00000554656 BET1O15155 118 aa8.35□□□□□ -1.07
SHMT2-215ENST00000554656 SPINT2O43291 252 aa8.35□□□□□ -1.07
SHMT2-215ENST00000554656 B3GALNT1O75752 331 aa8.35□□□□□ -1.07
SHMT2-215ENST00000554656 SLC22A5O76082 557 aa8.35□□□□□ -1.07
SHMT2-215ENST00000554656 OR2A4O95047 310 aa8.35□□□□□ -1.07
SHMT2-215ENST00000554656 SFT2D2O95562 160 aa8.35□□□□□ -1.07
SHMT2-215ENST00000554656 SNRNP70P08621 437 aaKnown RBP8.35□□□□□ -1.07
SHMT2-215ENST00000554656 GIPP09681 153 aaPredicted RBP8.35□□□□□ -1.07
SHMT2-215ENST00000554656 AADACP22760 399 aa8.35□□□□□ -1.07
SHMT2-215ENST00000554656 S100GP29377 79 aa8.35□□□□□ -1.07
SHMT2-215ENST00000554656 CEACAM3P40198 252 aa8.35□□□□□ -1.07
SHMT2-215ENST00000554656 PPP1R1AQ13522 171 aa8.35□□□□□ -1.07
SHMT2-215ENST00000554656 C9orf152Q5JTZ5 239 aa8.35□□□□□ -1.07
SHMT2-215ENST00000554656 LY6G6FQ5SQ64 297 aa8.35□□□□□ -1.07
SHMT2-215ENST00000554656 KCTD9Q7L273 389 aa8.35□□□□□ -1.07
SHMT2-215ENST00000554656 SGPP2Q8IWX5 399 aa8.35□□□□□ -1.07
SHMT2-215ENST00000554656 MRPL41Q8IXM3 137 aaKnown RBP8.35□□□□□ -1.07
SHMT2-215ENST00000554656 C5orf56Q8N8D9 126 aa8.35□□□□□ -1.07
SHMT2-215ENST00000554656 ZNF565Q8N9K5 539 aa8.35□□□□□ -1.07
SHMT2-215ENST00000554656 OR11H7Q8NGC8 314 aa8.35□□□□□ -1.07
SHMT2-215ENST00000554656 TOMM40LQ969M1 308 aa8.35□□□□□ -1.07
SHMT2-215ENST00000554656 NOL4LQ96MY1 436 aaPredicted RBP8.35□□□□□ -1.07
SHMT2-215ENST00000554656 OR2A7Q96R45 310 aa8.35□□□□□ -1.07
SHMT2-215ENST00000554656 PHB2Q99623 299 aa8.35□□□□□ -1.07
SHMT2-215ENST00000554656 LINC00574Q9H8X3 128 aa8.35□□□□□ -1.07
SHMT2-215ENST00000554656 CALYQ9NYX4 217 aa8.35□□□□□ -1.07
SHMT2-215ENST00000554656 KCNIP3Q9Y2W7 256 aa8.35□□□□□ -1.07
SHMT2-215ENST00000554656 TRAV39A0A0B4J263 110 aa8.34□□□□□ -1.07
SHMT2-215ENST00000554656 PSMB11A5LHX3 300 aa8.34□□□□□ -1.07
SHMT2-215ENST00000554656 J3QR06 171 aa8.34□□□□□ -1.07
SHMT2-215ENST00000554656 GPR31O00270 319 aa8.34□□□□□ -1.07
SHMT2-215ENST00000554656 TOR1AO14656 332 aa8.34□□□□□ -1.07
SHMT2-215ENST00000554656 ITGB1BP1O14713 200 aa8.34□□□□□ -1.07
SHMT2-215ENST00000554656 HSPA12AO43301 675 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms