RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 SMIM21Q3B7S5 101 aa9.76□□□□□ -0.85
SHMT2-212ENST00000554467 CMTM1Q8IZ96 169 aa9.76□□□□□ -0.85
SHMT2-212ENST00000554467 OR13A1Q8NGR1 328 aa9.76□□□□□ -0.85
SHMT2-212ENST00000554467 E5RGE8 158 aa9.76□□□□□ -0.85
SHMT2-212ENST00000554467 IGLV2-14P01704 120 aa9.76□□□□□ -0.85
SHMT2-212ENST00000554467 CTXN2P0C2S0 81 aa9.76□□□□□ -0.85
SHMT2-212ENST00000554467 OR4A8P0C604 315 aa9.76□□□□□ -0.85
SHMT2-212ENST00000554467 CXorf66Q5JRM2 361 aaPredicted RBP9.76□□□□□ -0.85
SHMT2-212ENST00000554467 SELENOHQ8IZQ5 122 aaKnown RBP9.76□□□□□ -0.85
SHMT2-212ENST00000554467 GCSAMQ8N6F7 178 aa9.76□□□□□ -0.85
SHMT2-212ENST00000554467 RBMXL1Q96E39 390 aaKnown RBP9.76□□□□□ -0.85
SHMT2-212ENST00000554467 NSG2Q9Y328 171 aa9.76□□□□□ -0.85
SHMT2-212ENST00000554467 IGKV1D-17A0A075B6S4 117 aa9.76□□□□□ -0.85
SHMT2-212ENST00000554467 A0A087WWC5 75 aa9.76□□□□□ -0.85
SHMT2-212ENST00000554467 TRBV6-6A0A0A6YYG2 114 aa9.76□□□□□ -0.85
SHMT2-212ENST00000554467 A0A0G2JRQ6 117 aa9.76□□□□□ -0.85
SHMT2-212ENST00000554467 TMEM30CPA0ZSE6 113 aa9.76□□□□□ -0.85
SHMT2-212ENST00000554467 THBDP07204 575 aa9.76□□□□□ -0.85
SHMT2-212ENST00000554467 PRDX2P32119 198 aa9.76□□□□□ -0.85
SHMT2-212ENST00000554467 CCL8P80075 99 aa9.76□□□□□ -0.85
SHMT2-212ENST00000554467 MRPS11P82912 194 aaKnown RBP9.76□□□□□ -0.85
SHMT2-212ENST00000554467 BSPH1Q075Z2 132 aa9.76□□□□□ -0.85
SHMT2-212ENST00000554467 SRSF7Q16629 238 aaKnown RBP eCLIP9.76□□□□□ -0.85
SHMT2-212ENST00000554467 SLC25A24Q6NUK1 477 aa9.76□□□□□ -0.85
SHMT2-212ENST00000554467 ACTR3CQ9C0K3 210 aaPredicted RBP9.76□□□□□ -0.85
SHMT2-212ENST00000554467 TUBD1Q9UJT1 453 aa9.76□□□□□ -0.85
SHMT2-212ENST00000554467 AKAP6Q13023 2319 aa9.76□□□□□ -0.85
SHMT2-212ENST00000554467 MAP1AP78559 2803 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-212ENST00000554467 DPRXA6NFQ7 191 aa9.75□□□□□ -0.85
SHMT2-212ENST00000554467 DLEU1O43261 78 aa9.75□□□□□ -0.85
SHMT2-212ENST00000554467 CYB5R3P00387 301 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-212ENST00000554467 HBZP02008 142 aa9.75□□□□□ -0.85
SHMT2-212ENST00000554467 FGF7P21781 194 aa9.75□□□□□ -0.85
SHMT2-212ENST00000554467 MDH2P40926 338 aaKnown RBP9.75□□□□□ -0.85
SHMT2-212ENST00000554467 VAMP2P63027 116 aa9.75□□□□□ -0.85
SHMT2-212ENST00000554467 BTNL3Q6UXE8 466 aa9.75□□□□□ -0.85
SHMT2-212ENST00000554467 FAM169BQ8N8A8 192 aa9.75□□□□□ -0.85
SHMT2-212ENST00000554467 DTD1Q8TEA8 209 aa9.75□□□□□ -0.85
SHMT2-212ENST00000554467 R3HDM4Q96D70 268 aa9.75□□□□□ -0.85
SHMT2-212ENST00000554467 CABLES2Q9BTV7 478 aa9.75□□□□□ -0.85
SHMT2-212ENST00000554467 CBLN4Q9NTU7 201 aa9.75□□□□□ -0.85
SHMT2-212ENST00000554467 GOLT1BQ9Y3E0 138 aa9.75□□□□□ -0.85
SHMT2-212ENST00000554467 CFAP46Q8IYW2 2715 aa9.75□□□□□ -0.85
SHMT2-212ENST00000554467 IFNL4K9M1U5 179 aa9.75□□□□□ -0.85
SHMT2-212ENST00000554467 DVL1O14640 695 aa9.75□□□□□ -0.85
SHMT2-212ENST00000554467 SEC11BP0C7V7 166 aa9.75□□□□□ -0.85
SHMT2-212ENST00000554467 GNG10P50151 68 aa9.75□□□□□ -0.85
SHMT2-212ENST00000554467 MRGPRGQ86SM5 289 aa9.75□□□□□ -0.85
SHMT2-212ENST00000554467 RNASEH2CQ8TDP1 164 aaKnown RBP9.75□□□□□ -0.85
SHMT2-212ENST00000554467 NEUROG1Q92886 237 aa9.75□□□□□ -0.85
SHMT2-212ENST00000554467 GINS3Q9BRX5 216 aa9.75□□□□□ -0.85
SHMT2-212ENST00000554467 WIPI2Q9Y4P8 454 aa9.75□□□□□ -0.85
SHMT2-212ENST00000554467 DOCK11Q5JSL3 2073 aa9.75□□□□□ -0.85
SHMT2-212ENST00000554467 UBE2KP61086 200 aa9.75□□□□□ -0.85
SHMT2-212ENST00000554467 RUNX1Q01196 453 aa9.75□□□□□ -0.85
SHMT2-212ENST00000554467 TLE1Q04724 770 aa9.75□□□□□ -0.85
SHMT2-212ENST00000554467 THNSL2Q86YJ6 484 aa9.75□□□□□ -0.85
SHMT2-212ENST00000554467 OR13D1Q8NGV5 346 aa9.75□□□□□ -0.85
SHMT2-212ENST00000554467 RCC1LQ96I51 464 aaKnown RBP9.75□□□□□ -0.85
SHMT2-212ENST00000554467 MBNL3Q9NUK0 354 aaKnown RBP9.75□□□□□ -0.85
SHMT2-212ENST00000554467 KCNIP1Q9NZI2 227 aa9.75□□□□□ -0.85
SHMT2-212ENST00000554467 A0A1B0GW64 132 aa9.74□□□□□ -0.85
SHMT2-212ENST00000554467 ZNF705GA8MUZ8 300 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-212ENST00000554467 F2RP25116 425 aa9.74□□□□□ -0.85
SHMT2-212ENST00000554467 EDDM3BP56851 147 aa9.74□□□□□ -0.85
SHMT2-212ENST00000554467 RND3P61587 244 aa9.74□□□□□ -0.85
SHMT2-212ENST00000554467 TEX38Q6PEX7 206 aa9.74□□□□□ -0.85
SHMT2-212ENST00000554467 SPSB3Q6PJ21 355 aa9.74□□□□□ -0.85
SHMT2-212ENST00000554467 FGFRL1Q8N441 504 aa9.74□□□□□ -0.85
SHMT2-212ENST00000554467 LRTM2Q8N967 370 aa9.74□□□□□ -0.85
SHMT2-212ENST00000554467 OR2G3Q8NGZ4 309 aa9.74□□□□□ -0.85
SHMT2-212ENST00000554467 C1QTNF9BB2RNN3 333 aa9.74□□□□□ -0.85
SHMT2-212ENST00000554467 SRP19P09132 144 aaKnown RBP9.74□□□□□ -0.85
SHMT2-212ENST00000554467 C1QTNF9P0C862 333 aa9.74□□□□□ -0.85
SHMT2-212ENST00000554467 RAB4AP20338 218 aa9.74□□□□□ -0.85
SHMT2-212ENST00000554467 UTF1Q5T230 341 aa9.74□□□□□ -0.85
SHMT2-212ENST00000554467 ABHD14BQ96IU4 210 aa9.74□□□□□ -0.85
SHMT2-212ENST00000554467 WFIKKN1Q96NZ8 548 aa9.74□□□□□ -0.85
SHMT2-212ENST00000554467 OR2D2Q9H210 308 aa9.74□□□□□ -0.85
SHMT2-212ENST00000554467 PLEKHA2Q9HB19 425 aa9.74□□□□□ -0.85
SHMT2-212ENST00000554467 HIVEP3Q5T1R4 2406 aa9.74□□□□□ -0.85
SHMT2-212ENST00000554467 YLPM1P49750 1951 aaKnown RBP9.74□□□□□ -0.85
SHMT2-212ENST00000554467 CDS2O95674 445 aa9.73□□□□□ -0.85
SHMT2-212ENST00000554467 IGHV1-46P01743 117 aa9.73□□□□□ -0.85
SHMT2-212ENST00000554467 SERPINE2P07093 398 aa9.73□□□□□ -0.85
SHMT2-212ENST00000554467 GRNP28799 593 aaKnown RBP9.73□□□□□ -0.85
SHMT2-212ENST00000554467 NKX2-1P43699 371 aaPredicted RBP9.73□□□□□ -0.85
SHMT2-212ENST00000554467 TNFAIP6P98066 277 aaPredicted RBP9.73□□□□□ -0.85
SHMT2-212ENST00000554467 TMEM108Q6UXF1 575 aa9.73□□□□□ -0.85
SHMT2-212ENST00000554467 DRAM1Q8N682 238 aa9.73□□□□□ -0.85
SHMT2-212ENST00000554467 GALMQ96C23 342 aa9.73□□□□□ -0.85
SHMT2-212ENST00000554467 ACACBO00763 2458 aa9.73□□□□□ -0.85
SHMT2-212ENST00000554467 SVEP1Q4LDE5 3571 aa9.73□□□□□ -0.85
SHMT2-212ENST00000554467 RBFOX3A6NFN3 312 aa9.73□□□□□ -0.85
SHMT2-212ENST00000554467 FAM90A27PA6NNH2 459 aa9.73□□□□□ -0.85
SHMT2-212ENST00000554467 SRRM5B3KS81 715 aa9.73□□□□□ -0.85
SHMT2-212ENST00000554467 SP5Q6BEB4 398 aaPredicted RBP9.73□□□□□ -0.85
SHMT2-212ENST00000554467 MOB1BQ7L9L4 216 aa9.73□□□□□ -0.85
SHMT2-212ENST00000554467 ZNF429Q86V71 674 aa9.73□□□□□ -0.85
SHMT2-212ENST00000554467 FAM185AQ8N0U4 392 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms