RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 AWAT2Q6E213 333 aa2.25□□□□□ -2.05
PRPF39-206ENST00000554429 FAM231DQ6ZW35 169 aa2.25□□□□□ -2.05
PRPF39-206ENST00000554429 C9orf40Q8IXQ3 194 aa2.25□□□□□ -2.05
PRPF39-206ENST00000554429 PDZD9Q8IXQ8 264 aa2.25□□□□□ -2.05
PRPF39-206ENST00000554429 TEX45Q8NA69 505 aa2.25□□□□□ -2.05
PRPF39-206ENST00000554429 XAGE5Q8WWM1 108 aa2.25□□□□□ -2.05
PRPF39-206ENST00000554429 UBE2E3Q969T4 207 aa2.25□□□□□ -2.05
PRPF39-206ENST00000554429 GMPPAQ96IJ6 420 aaPredicted RBP2.25□□□□□ -2.05
PRPF39-206ENST00000554429 RDH12Q96NR8 316 aa2.25□□□□□ -2.05
PRPF39-206ENST00000554429 GPR82Q96P67 336 aa2.25□□□□□ -2.05
PRPF39-206ENST00000554429 OXGR1Q96P68 337 aa2.25□□□□□ -2.05
PRPF39-206ENST00000554429 RNF121Q9H920 327 aa2.25□□□□□ -2.05
PRPF39-206ENST00000554429 CBLN4Q9NTU7 201 aa2.25□□□□□ -2.05
PRPF39-206ENST00000554429 DNAJC27Q9NZQ0 273 aa2.25□□□□□ -2.05
PRPF39-206ENST00000554429 DOK5Q9P104 306 aa2.25□□□□□ -2.05
PRPF39-206ENST00000554429 PLA2G2DQ9UNK4 145 aa2.25□□□□□ -2.05
PRPF39-206ENST00000554429 TP53TG1Q9Y2A0 90 aa2.25□□□□□ -2.05
PRPF39-206ENST00000554429 IGLV3-32A0A0A0MS00 114 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 IGHV2-70DA0A0C4DH43 119 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 ZNF850A8MQ14 1090 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 CEACAM18A8MTB9 384 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 RBFOX2O43251 390 aaKnown RBP eCLIP2.24□□□□□ -2.05
PRPF39-206ENST00000554429 AIFM1O95831 613 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 H1F0P07305 194 aaKnown RBP2.24□□□□□ -2.05
PRPF39-206ENST00000554429 RFPL3SP0C7P2 107 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 CCL3P10147 92 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 CD79AP11912 226 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 CPMP14384 443 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 RCC1P18754 421 aaPredicted RBP2.24□□□□□ -2.05
PRPF39-206ENST00000554429 CD34P28906 385 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 HOXD3P31249 432 aaPredicted RBP2.24□□□□□ -2.05
PRPF39-206ENST00000554429 PTGDSP41222 190 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 GZMMP51124 257 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 ISL1P61371 349 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 PSG6Q00889 435 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 PLGLB1Q02325 96 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 CD164Q04900 197 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 EBPQ15125 230 aaKnown RBP2.24□□□□□ -2.05
PRPF39-206ENST00000554429 SNAI3Q3KNW1 292 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 DEFB134Q4QY38 66 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 FRRS1Q6ZNA5 592 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 HOGA1Q86XE5 327 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 WFDC11Q8NEX6 87 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 OR4X1Q8NH49 305 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 CMBLQ96DG6 245 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 ST6GAL2Q96JF0 529 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 PRR25Q96S07 402 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 DPY30Q9C005 99 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 SLIRPQ9GZT3 109 aaKnown RBP2.24□□□□□ -2.05
PRPF39-206ENST00000554429 DEFB127Q9H1M4 99 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 AKIP1Q9NQ31 210 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 SDR39U1Q9NRG7 319 aaPredicted RBP2.24□□□□□ -2.05
PRPF39-206ENST00000554429 RBFOX1Q9NWB1 397 aaKnown RBP2.24□□□□□ -2.05
PRPF39-206ENST00000554429 TRAPPC2LQ9UL33 140 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 KCNS2Q9ULS6 477 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 CARHSP1Q9Y2V2 147 aaKnown RBP2.24□□□□□ -2.05
PRPF39-206ENST00000554429 ORC6Q9Y5N6 252 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 NSD1Q96L73 2696 aaPredicted RBP2.24□□□□□ -2.05
PRPF39-206ENST00000554429 DNHD1Q96M86 4753 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 TRAV30A0A087WSZ9 112 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 A0A1B0GW64 132 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 A0A1W2PPR1 153 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 TMEM189A5PLL7 270 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 F5H697 171 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 GABRPO00591 440 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 CD5LO43866 347 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 ZNF354AO60765 605 aaPredicted RBP2.24□□□□□ -2.05
PRPF39-206ENST00000554429 UPK1BO75841 260 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 TNFSF13O75888 250 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 OR7C1O76099 320 aaPredicted RBP2.24□□□□□ -2.05
PRPF39-206ENST00000554429 TOMM40O96008 361 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 PLAUP00749 431 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 HBE1P02100 147 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 CD2P06729 351 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 UCHL1P09936 223 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 CT45A8P0DMV1 189 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 CT45A9P0DMV2 189 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 CXCL3P19876 107 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 PSMB1P20618 241 aaKnown RBP2.24□□□□□ -2.05
PRPF39-206ENST00000554429 MNDAP41218 407 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 GABRA2P47869 451 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 TFPI2P48307 235 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 HBA1P69905 142 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 MEF2CQ06413 473 aaPredicted RBP2.24□□□□□ -2.05
PRPF39-206ENST00000554429 RBM39Q14498 530 aaKnown RBP2.24□□□□□ -2.05
PRPF39-206ENST00000554429 UBE2V2Q15819 145 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 CT45A2Q5DJT8 189 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 FAM27D1Q5T7N8 215 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 OTPQ5XKR4 325 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 HLA-DQA1Q5Y7H0 255 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 LCN8Q6JVE9 175 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 TRIM40Q6P9F5 258 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 TEPPQ6URK8 271 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 MSRB3Q8IXL7 192 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 ZNF615Q8N8J6 731 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 OR5R1Q8NH85 324 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 RXFP4Q8TDU9 374 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 S1PR3Q99500 378 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 MACROD1Q9BQ69 325 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 LIME1Q9H400 295 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms