RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 RTTNQ86VV8 2226 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 MYO7BQ6PIF6 2116 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 IGKV1-27A0A075B6S5 117 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 LOC102724200A0A096LPH7 203 aaPredicted RBP1.87□□□□□ -2.11
SCFD1-210ENST00000553693 IGHV3-72A0A0B4J1Y9 119 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 IGHV1-3A0A0C4DH29 117 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 LOC389332A0A1B0GUA5 103 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 TMEM72A0PK05 275 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 TLCD2A6NGC4 264 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 SMIM23A6NLE4 172 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 OR2AT4A6NND4 320 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 H3BP45 60 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 CLDN34H7C241 214 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 PHYHO14832 338 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 SOCS1O15524 211 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 STX10O60499 249 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 SHOX2O60902 331 aaPredicted RBP1.87□□□□□ -2.11
SCFD1-210ENST00000553693 NDUFS6O75380 124 aaKnown RBP1.87□□□□□ -2.11
SCFD1-210ENST00000553693 E2F6O75461 281 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 IGKV1D-16P01601 117 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 OCM2P0CE71 109 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 SPNP16150 400 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 ZNF3P17036 446 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 FLNAP21333 2647 aaKnown RBP1.87□□□□□ -2.11
SCFD1-210ENST00000553693 IL3RAP26951 378 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 TEAD1P28347 426 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 AQP5P55064 265 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 KRTAP12-4P60329 112 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 UBE2G2P60604 165 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 SLAMF1Q13291 335 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 ZNHIT3Q15649 155 aaPredicted RBP1.87□□□□□ -2.11
SCFD1-210ENST00000553693 KLHL12Q53G59 568 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 RNASE13Q5GAN3 156 aaKnown RBP1.87□□□□□ -2.11
SCFD1-210ENST00000553693 DNLZQ5SXM8 178 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 ZNF684Q5T5D7 378 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 NXNL2Q5VZ03 156 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 LAMTOR1Q6IAA8 161 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 CSPG4Q6UVK1 2322 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 FAM151BQ6UXP7 276 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 DGAT2L6Q6ZPD8 337 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 FA2HQ7L5A8 372 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 WDR86Q86TI4 376 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 BOD1L2Q8IYS8 172 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 GAPTQ8N292 157 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 C15orf56Q8N910 161 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 DNAAF3Q8N9W5 541 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 LINC00301Q8NCQ3 95 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 LFNGQ8NES3 379 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 OR4K2Q8NGD2 314 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 RNASEH2CQ8TDP1 164 aaKnown RBP1.87□□□□□ -2.11
SCFD1-210ENST00000553693 SMIM12Q96EX1 92 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 COX14Q96I36 57 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 PGLYRP3Q96LB9 341 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 BCL2L14Q9BZR8 327 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 UCK1Q9HA47 277 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 SLC23A2Q9UGH3 650 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 FBXL3Q9UKT7 428 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 CBY1Q9Y3M2 126 aa1.87□□□□□ -2.11
SCFD1-210ENST00000553693 MEGF8Q7Z7M0 2845 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 HRNRQ86YZ3 2850 aaPredicted RBP1.86□□□□□ -2.11
SCFD1-210ENST00000553693 DAPL1A0PJW8 107 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 OR5K4A6NMS3 321 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 CDIPTO14735 213 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 UGT2B11O75310 529 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 CECR9P0C854 216 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 LIMS3P0CW19 117 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 LIMS4P0CW20 117 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 PSMB6P28072 239 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 KIR3DL2P43630 455 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 CAPZBP47756 277 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 LGALS7P47929 136 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 ZNF83P51522 516 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 DLX6P56179 175 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 PRDX1Q06830 199 aaKnown RBP1.86□□□□□ -2.11
SCFD1-210ENST00000553693 TFF3Q07654 80 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 BAXQ07812 192 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 IHHQ14623 411 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 EXOC3L4Q17RC7 722 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 CLEC12BQ2HXU8 276 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 CLEC12AQ5QGZ9 265 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 CCDC122Q5T0U0 273 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 KDM4DQ6B0I6 523 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 FAM45BPQ6NSW5 357 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 SHISA6Q6ZSJ9 500 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 NTM-AS1Q6ZSK4 140 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 Q6ZT83 130 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 OLIG3Q7RTU3 272 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 GALNT10Q86SR1 603 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 LINC00596Q86U02 117 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 ZGRF1Q86YA3 2104 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 DOLPP1Q86YN1 238 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 FUNDC1Q8IVP5 155 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 UMODL1-AS1Q8N2C9 162 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 ZCCHC24Q8N2G6 241 aaKnown RBP1.86□□□□□ -2.11
SCFD1-210ENST00000553693 OR2AE1Q8NHA4 323 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 DYNC2LI1Q8TCX1 351 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 RTN4IP1Q8WWV3 396 aaPredicted RBP1.86□□□□□ -2.11
SCFD1-210ENST00000553693 OR5P2Q8WZ92 322 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 PSMF1Q92530 271 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 TNFRSF14Q92956 283 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms