RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 ABCA8O94911 1581 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 MROH2BQ7Z745 1585 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 ANKRD20A5PA0PJZ0 165 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 TRAPPC13A5PLN9 417 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 ARL5CA6NH57 179 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 OR4C46A6NHA9 309 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 OR5H1A6NKK0 313 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 C16orf90A8MZG2 172 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 TAAR5O14804 337 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 DEGS1O15121 323 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 SSNA1O43805 119 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 GNG7O60262 68 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 MPDU1O75352 247 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 TRAPPC6AO75865 159 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 PIAS1O75925 651 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 ATG12O94817 140 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 HPRT1P00492 218 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 APODP05090 189 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 PAEPP09466 180 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 P0C880 135 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 CSRP1P21291 193 aaKnown RBP1.44□□□□□ -2.18
VRK1-202ENST00000553683 BRS3P32247 399 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 SULT1A1P50225 295 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 SULT1A2P50226 295 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 GZMMP51124 257 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 DLX6P56179 175 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 TCL1AP56279 114 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 PIGPP57054 158 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 TAS2R43P59537 309 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 RAB8AP61006 207 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 NCALDP61601 193 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 RHOBP62745 196 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 RPL31P62899 125 aaKnown RBP1.44□□□□□ -2.18
VRK1-202ENST00000553683 SELENOWP63302 87 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 PAFAH1B2P68402 229 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 HBA1P69905 142 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 BTN3A2P78410 334 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 FMODQ06828 376 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 BAXQ07812 192 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 ZNF235Q14590 738 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 GUSBP1Q15486 140 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 HIST3H3Q16695 136 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 ZNF181Q2M3W8 571 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 TRMT5Q32P41 509 aaKnown RBP1.44□□□□□ -2.18
VRK1-202ENST00000553683 TRMT12Q53H54 448 aaKnown RBP1.44□□□□□ -2.18
VRK1-202ENST00000553683 HIST2H3PS2Q5TEC6 136 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 CST9Q5W186 159 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 TMEM215Q68D42 235 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 LAMTOR1Q6IAA8 161 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 SFXN4Q6P4A7 337 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 PRSS54Q6PEW0 395 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 OPN5Q6U736 354 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 ALKAL1Q6UXT8 129 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 PDZD9Q8IXQ8 264 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 PACRGLQ8N7B6 248 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 TMEM105Q8N8V8 129 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 GATD1Q8NB37 220 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 OR52L1Q8NGH7 329 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 OR52E4Q8NGH9 312 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 OR1S2Q8NGQ3 325 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 OR13C8Q8NGS7 320 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 OR2A1Q8NGT9 310 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 OR5K1Q8NHB7 308 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 KLF14Q8TD94 323 aaPredicted RBP1.44□□□□□ -2.18
VRK1-202ENST00000553683 EEF1AKMT1Q8WVE0 214 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 SKA2Q8WVK7 121 aaPredicted RBP1.44□□□□□ -2.18
VRK1-202ENST00000553683 RCN3Q96D15 328 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 CMBLQ96DG6 245 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 REEP6Q96HR9 211 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 ADTRPQ96IZ2 230 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 GPR82Q96P67 336 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 OR52E6Q96RD3 313 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 ATP5SQ99766 215 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 CMSS1Q9BQ75 279 aaKnown RBP1.44□□□□□ -2.18
VRK1-202ENST00000553683 TAPBPLQ9BX59 468 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 EBPLQ9BY08 206 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 LINC00470Q9BZP3 86 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 NKX6-2Q9C056 277 aaPredicted RBP1.44□□□□□ -2.18
VRK1-202ENST00000553683 MS4A6AQ9H2W1 248 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 METTL17Q9H7H0 456 aaPredicted RBP1.44□□□□□ -2.18
VRK1-202ENST00000553683 RETNQ9HD89 108 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 FGF20Q9NP95 211 aaPredicted RBP1.44□□□□□ -2.18
VRK1-202ENST00000553683 SPANXB1Q9NS25 103 aaPredicted RBP1.44□□□□□ -2.18
VRK1-202ENST00000553683 DMAC2Q9NW81 257 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 MCUBQ9NWR8 336 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 IDI2-AS1Q9NZ38 188 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 TMEM216Q9P0N5 145 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 HSPB8Q9UJY1 196 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 ERG28Q9UKR5 140 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 UBIAD1Q9Y5Z9 338 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 SAR1BQ9Y6B6 198 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 U3KQ87 197 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 PIK3C2AO00443 1686 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 EFCAB6Q5THR3 1501 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 A0A1W2PP64 1363 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 KTN1Q86UP2 1357 aaKnown RBP1.44□□□□□ -2.18
VRK1-202ENST00000553683 ABCC12Q96J65 1359 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 STRCP1A6NGW2 1772 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 WDR97A6NE52 1622 aa1.44□□□□□ -2.18
VRK1-202ENST00000553683 ABCC8Q09428 1581 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms