RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 NUDT19A8MXV4 375 aa10.61□□□□□ -0.71
NUP188-211ENST00000550219 ST8SIA5O15466 376 aa10.61□□□□□ -0.71
NUP188-211ENST00000550219 LYRM1O43325 122 aa10.61□□□□□ -0.71
NUP188-211ENST00000550219 OR8U9P0C7N5 309 aa10.61□□□□□ -0.71
NUP188-211ENST00000550219 HOXD3P31249 432 aaPredicted RBP10.61□□□□□ -0.71
NUP188-211ENST00000550219 BTCP35070 178 aa10.61□□□□□ -0.71
NUP188-211ENST00000550219 MSMO1Q15800 293 aa10.61□□□□□ -0.71
NUP188-211ENST00000550219 WFDC9Q8NEX5 89 aa10.61□□□□□ -0.71
NUP188-211ENST00000550219 OR51S1Q8NGJ8 323 aa10.61□□□□□ -0.71
NUP188-211ENST00000550219 OR13C8Q8NGS7 320 aa10.61□□□□□ -0.71
NUP188-211ENST00000550219 OR10X1Q8NGY0 326 aa10.61□□□□□ -0.71
NUP188-211ENST00000550219 OR8U1Q8NH10 309 aa10.61□□□□□ -0.71
NUP188-211ENST00000550219 ST6GALNAC6Q969X2 333 aa10.61□□□□□ -0.71
NUP188-211ENST00000550219 MRGPRFQ96AM1 343 aa10.61□□□□□ -0.71
NUP188-211ENST00000550219 RCC1LQ96I51 464 aaKnown RBP10.61□□□□□ -0.71
NUP188-211ENST00000550219 NOL4LQ96MY1 436 aaPredicted RBP10.61□□□□□ -0.71
NUP188-211ENST00000550219 MCUBQ9NWR8 336 aa10.61□□□□□ -0.71
NUP188-211ENST00000550219 LINC00527Q9UJ94 153 aa10.61□□□□□ -0.71
NUP188-211ENST00000550219 SCP2D1Q9UJQ7 156 aa10.61□□□□□ -0.71
NUP188-211ENST00000550219 LINC00854A0A1B0GVQ3 168 aa10.6□□□□□ -0.71
NUP188-211ENST00000550219 CENPXA8MT69 81 aa10.6□□□□□ -0.71
NUP188-211ENST00000550219 K7EIL1 84 aa10.6□□□□□ -0.71
NUP188-211ENST00000550219 PROP1O75360 226 aa10.6□□□□□ -0.71
NUP188-211ENST00000550219 SLC22A5O76082 557 aa10.6□□□□□ -0.71
NUP188-211ENST00000550219 IGKV1D-33P01593 117 aa10.6□□□□□ -0.71
NUP188-211ENST00000550219 IGKV1-33P01594 117 aa10.6□□□□□ -0.71
NUP188-211ENST00000550219 IGLV2-14P01704 120 aa10.6□□□□□ -0.71
NUP188-211ENST00000550219 REG1BP48304 166 aa10.6□□□□□ -0.71
NUP188-211ENST00000550219 HERV-K104P61576 105 aa10.6□□□□□ -0.71
NUP188-211ENST00000550219 DCTN2Q13561 401 aaKnown RBP10.6□□□□□ -0.71
NUP188-211ENST00000550219 C5orf56Q8N8D9 126 aa10.6□□□□□ -0.71
NUP188-211ENST00000550219 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.6□□□□□ -0.71
NUP188-211ENST00000550219 ZNF251Q9BRH9 671 aa10.6□□□□□ -0.71
NUP188-211ENST00000550219 FXYD6Q9H0Q3 95 aa10.6□□□□□ -0.71
NUP188-211ENST00000550219 PIPOXQ9P0Z9 390 aa10.6□□□□□ -0.71
NUP188-211ENST00000550219 IGHV3-72A0A0B4J1Y9 119 aa10.59□□□□□ -0.71
NUP188-211ENST00000550219 HSD17B6O14756 317 aa10.59□□□□□ -0.71
NUP188-211ENST00000550219 RAB29O14966 203 aa10.59□□□□□ -0.71
NUP188-211ENST00000550219 IL3RAP26951 378 aa10.59□□□□□ -0.71
NUP188-211ENST00000550219 SLC6A1P30531 599 aa10.59□□□□□ -0.71
NUP188-211ENST00000550219 ECI1P42126 302 aa10.59□□□□□ -0.71
NUP188-211ENST00000550219 FXYD4P59646 89 aa10.59□□□□□ -0.71
NUP188-211ENST00000550219 SURF2Q15527 256 aaPredicted RBP10.59□□□□□ -0.71
NUP188-211ENST00000550219 SCGB2B2Q4G0G5 96 aa10.59□□□□□ -0.71
NUP188-211ENST00000550219 DEFB121Q5J5C9 76 aa10.59□□□□□ -0.71
NUP188-211ENST00000550219 FAM71F2Q6NXP2 309 aa10.59□□□□□ -0.71
NUP188-211ENST00000550219 IDO2Q6ZQW0 420 aa10.59□□□□□ -0.71
NUP188-211ENST00000550219 ZNF833PQ6ZTB9 187 aa10.59□□□□□ -0.71
NUP188-211ENST00000550219 C18orf65Q6ZTR6 163 aa10.59□□□□□ -0.71
NUP188-211ENST00000550219 C8orf86Q6ZUL3 223 aa10.59□□□□□ -0.71
NUP188-211ENST00000550219 SLC35E3Q7Z769 313 aa10.59□□□□□ -0.71
NUP188-211ENST00000550219 MOB3BQ86TA1 216 aa10.59□□□□□ -0.71
NUP188-211ENST00000550219 OR8H3Q8N146 312 aa10.59□□□□□ -0.71
NUP188-211ENST00000550219 ZNF645Q8N7E2 425 aa10.59□□□□□ -0.71
NUP188-211ENST00000550219 LINC00482Q8N8I6 264 aa10.59□□□□□ -0.71
NUP188-211ENST00000550219 KLHL30-AS1Q8NEE0 82 aa10.59□□□□□ -0.71
NUP188-211ENST00000550219 DPF1Q92782 380 aa10.59□□□□□ -0.71
NUP188-211ENST00000550219 C5orf30Q96GV9 206 aa10.59□□□□□ -0.71
NUP188-211ENST00000550219 ABHD14BQ96IU4 210 aa10.59□□□□□ -0.71
NUP188-211ENST00000550219 RSRP1Q9BUV0 290 aa10.59□□□□□ -0.71
NUP188-211ENST00000550219 SLC5A7Q9GZV3 580 aa10.59□□□□□ -0.71
NUP188-211ENST00000550219 OR2D2Q9H210 308 aa10.59□□□□□ -0.71
NUP188-211ENST00000550219 RNF150Q9ULK6 438 aa10.59□□□□□ -0.71
NUP188-211ENST00000550219 SAA2-SAA4A0A096LPE2 208 aa10.58□□□□□ -0.72
NUP188-211ENST00000550219 WI2-2373I1.2A0A1W2PRP0 233 aa10.58□□□□□ -0.72
NUP188-211ENST00000550219 FAM90A9PA6NNJ1 464 aa10.58□□□□□ -0.72
NUP188-211ENST00000550219 DUS4LO95620 317 aaKnown RBP10.58□□□□□ -0.72
NUP188-211ENST00000550219 SAA2P0DJI9 122 aaPredicted RBP10.58□□□□□ -0.72
NUP188-211ENST00000550219 GNRHRP30968 328 aa10.58□□□□□ -0.72
NUP188-211ENST00000550219 DEFA1P59665 94 aa10.58□□□□□ -0.72
NUP188-211ENST00000550219 DEFA3P59666 94 aa10.58□□□□□ -0.72
NUP188-211ENST00000550219 KRTAP10-11P60412 298 aa10.58□□□□□ -0.72
NUP188-211ENST00000550219 RPL23AP62750 156 aaKnown RBP10.58□□□□□ -0.72
NUP188-211ENST00000550219 ZNF816Q0VGE8 651 aaPredicted RBP10.58□□□□□ -0.72
NUP188-211ENST00000550219 EIF4EBP1Q13541 118 aaPredicted RBP10.58□□□□□ -0.72
NUP188-211ENST00000550219 C11orf87Q6NUJ2 197 aa10.58□□□□□ -0.72
NUP188-211ENST00000550219 MZT2BQ6NZ67 158 aa10.58□□□□□ -0.72
NUP188-211ENST00000550219 LPCAT3Q6P1A2 487 aa10.58□□□□□ -0.72
NUP188-211ENST00000550219 ETV3LQ6ZN32 361 aa10.58□□□□□ -0.72
NUP188-211ENST00000550219 THNSL2Q86YJ6 484 aa10.58□□□□□ -0.72
NUP188-211ENST00000550219 ZBTB34Q8NCN2 500 aa10.58□□□□□ -0.72
NUP188-211ENST00000550219 BVESQ8NE79 360 aa10.58□□□□□ -0.72
NUP188-211ENST00000550219 CHPT1Q8WUD6 406 aa10.58□□□□□ -0.72
NUP188-211ENST00000550219 SECTM1Q8WVN6 248 aa10.58□□□□□ -0.72
NUP188-211ENST00000550219 SLC25A21Q9BQT8 299 aaPredicted RBP10.58□□□□□ -0.72
NUP188-211ENST00000550219 CCL28Q9NRJ3 127 aa10.58□□□□□ -0.72
NUP188-211ENST00000550219 SDHAF2Q9NX18 166 aa10.58□□□□□ -0.72
NUP188-211ENST00000550219 ZNF221Q9UK13 617 aa10.58□□□□□ -0.72
NUP188-211ENST00000550219 GPR132Q9UNW8 380 aa10.58□□□□□ -0.72
NUP188-211ENST00000550219 RBM7Q9Y580 266 aaKnown RBP10.58□□□□□ -0.72
NUP188-211ENST00000550219 NCBP2LA6PVI3 153 aaKnown RBP10.57□□□□□ -0.72
NUP188-211ENST00000550219 FGF16O43320 207 aa10.57□□□□□ -0.72
NUP188-211ENST00000550219 NDUFB6O95139 128 aa10.57□□□□□ -0.72
NUP188-211ENST00000550219 GPR12P47775 334 aa10.57□□□□□ -0.72
NUP188-211ENST00000550219 CCR6P51684 374 aa10.57□□□□□ -0.72
NUP188-211ENST00000550219 RAB25P57735 213 aa10.57□□□□□ -0.72
NUP188-211ENST00000550219 SLC35B1P78383 322 aa10.57□□□□□ -0.72
NUP188-211ENST00000550219 ZNF818PQ6ZRF7 136 aa10.57□□□□□ -0.72
NUP188-211ENST00000550219 FOXRED2Q8IWF2 684 aa10.57□□□□□ -0.72
NUP188-211ENST00000550219 MRPL41Q8IXM3 137 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms