RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 KDF1Q8NAX2 398 aaPredicted RBP9.31□□□□□ -0.92
LINC00661-204ENST00000549354 METRNQ9UJH8 293 aa9.31□□□□□ -0.92
LINC00661-204ENST00000549354 OR2W1Q9Y3N9 320 aa9.31□□□□□ -0.92
LINC00661-204ENST00000549354 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.31□□□□□ -0.92
LINC00661-204ENST00000549354 KIR2DS1A0A191URI9 304 aa9.3□□□□□ -0.92
LINC00661-204ENST00000549354 MBD3L4A6NDZ8 208 aaPredicted RBP9.3□□□□□ -0.92
LINC00661-204ENST00000549354 MBD3L3A6NE82 208 aaPredicted RBP9.3□□□□□ -0.92
LINC00661-204ENST00000549354 MBD3L5A6NJ08 208 aaPredicted RBP9.3□□□□□ -0.92
LINC00661-204ENST00000549354 DFFBO76075 338 aa9.3□□□□□ -0.92
LINC00661-204ENST00000549354 IGKV1-5P01602 117 aa9.3□□□□□ -0.92
LINC00661-204ENST00000549354 GZMHP20718 246 aa9.3□□□□□ -0.92
LINC00661-204ENST00000549354 KIR2DS4P43632 304 aa9.3□□□□□ -0.92
LINC00661-204ENST00000549354 FGF12P61328 243 aa9.3□□□□□ -0.92
LINC00661-204ENST00000549354 KIR2DS1Q14954 304 aa9.3□□□□□ -0.92
LINC00661-204ENST00000549354 LHFPL4Q7Z7J7 247 aa9.3□□□□□ -0.92
LINC00661-204ENST00000549354 RPP25LQ8N5L8 163 aaKnown RBP9.3□□□□□ -0.92
LINC00661-204ENST00000549354 MBD3L2Q8NHZ7 208 aaPredicted RBP9.3□□□□□ -0.92
LINC00661-204ENST00000549354 OR5P3Q8WZ94 311 aa9.3□□□□□ -0.92
LINC00661-204ENST00000549354 SDF2L1Q9HCN8 221 aa9.3□□□□□ -0.92
LINC00661-204ENST00000549354 PSG11Q9UQ72 335 aa9.3□□□□□ -0.92
LINC00661-204ENST00000549354 ZG16O60844 167 aa9.3□□□□□ -0.92
LINC00661-204ENST00000549354 OR2H2O95918 312 aa9.3□□□□□ -0.92
LINC00661-204ENST00000549354 CYB5R3P00387 301 aaPredicted RBP9.3□□□□□ -0.92
LINC00661-204ENST00000549354 CGAP01215 116 aa9.3□□□□□ -0.92
LINC00661-204ENST00000549354 THBS3P49746 956 aa9.3□□□□□ -0.92
LINC00661-204ENST00000549354 SSTP61278 116 aa9.3□□□□□ -0.92
LINC00661-204ENST00000549354 FAM185AQ8N0U4 392 aa9.3□□□□□ -0.92
LINC00661-204ENST00000549354 OR10A7Q8NGE5 316 aa9.3□□□□□ -0.92
LINC00661-204ENST00000549354 MRPL30Q8TCC3 161 aaKnown RBP9.3□□□□□ -0.92
LINC00661-204ENST00000549354 SSMEM1Q8WWF3 244 aa9.3□□□□□ -0.92
LINC00661-204ENST00000549354 FAM122AQ96E09 287 aa9.3□□□□□ -0.92
LINC00661-204ENST00000549354 H7BYZ3 331 aa9.3□□□□□ -0.92
LINC00661-204ENST00000549354 ACTL6BO94805 426 aa9.3□□□□□ -0.92
LINC00661-204ENST00000549354 APELAP0DMC3 54 aa9.3□□□□□ -0.92
LINC00661-204ENST00000549354 UBE2NP61088 152 aaKnown RBP9.3□□□□□ -0.92
LINC00661-204ENST00000549354 PMS2P11Q13670 270 aa9.3□□□□□ -0.92
LINC00661-204ENST00000549354 CEACAM21Q3KPI0 293 aa9.3□□□□□ -0.92
LINC00661-204ENST00000549354 Q3ZCU0 254 aa9.3□□□□□ -0.92
LINC00661-204ENST00000549354 INO80CQ6PI98 192 aaPredicted RBP9.3□□□□□ -0.92
LINC00661-204ENST00000549354 MRPL41Q8IXM3 137 aaKnown RBP9.3□□□□□ -0.92
LINC00661-204ENST00000549354 ZNF525Q8N782 197 aa9.3□□□□□ -0.92
LINC00661-204ENST00000549354 A0A087WWC5 75 aa9.29□□□□□ -0.92
LINC00661-204ENST00000549354 C1QTNF9BB2RNN3 333 aa9.29□□□□□ -0.92
LINC00661-204ENST00000549354 H0Y980 276 aa9.29□□□□□ -0.92
LINC00661-204ENST00000549354 AMBPP02760 352 aa9.29□□□□□ -0.92
LINC00661-204ENST00000549354 TFF3Q07654 80 aa9.29□□□□□ -0.92
LINC00661-204ENST00000549354 SLC38A11Q08AI6 406 aa9.29□□□□□ -0.92
LINC00661-204ENST00000549354 BATFQ16520 125 aa9.29□□□□□ -0.92
LINC00661-204ENST00000549354 SIRT7Q9NRC8 400 aa9.29□□□□□ -0.92
LINC00661-204ENST00000549354 A0A1B0GW64 132 aa9.29□□□□□ -0.92
LINC00661-204ENST00000549354 PRSS47A8MTI9 375 aa9.29□□□□□ -0.92
LINC00661-204ENST00000549354 PPP5D1E7EU14 171 aa9.29□□□□□ -0.92
LINC00661-204ENST00000549354 PSPNO60542 156 aa9.29□□□□□ -0.92
LINC00661-204ENST00000549354 PAGE4O60829 102 aa9.29□□□□□ -0.92
LINC00661-204ENST00000549354 TNFSF13O75888 250 aa9.29□□□□□ -0.92
LINC00661-204ENST00000549354 IFNA10P01566 189 aa9.29□□□□□ -0.92
LINC00661-204ENST00000549354 SELLP14151 372 aa9.29□□□□□ -0.92
LINC00661-204ENST00000549354 MYOD1P15172 320 aa9.29□□□□□ -0.92
LINC00661-204ENST00000549354 GALR1P47211 349 aa9.29□□□□□ -0.92
LINC00661-204ENST00000549354 GNB2P62879 340 aa9.29□□□□□ -0.92
LINC00661-204ENST00000549354 SEM1Q6ZVN7 128 aa9.29□□□□□ -0.92
LINC00661-204ENST00000549354 TGIF2LXQ8IUE1 241 aa9.29□□□□□ -0.92
LINC00661-204ENST00000549354 H1FOOQ8IZA3 346 aaPredicted RBP9.29□□□□□ -0.92
LINC00661-204ENST00000549354 ZNF664Q8N3J9 261 aa9.29□□□□□ -0.92
LINC00661-204ENST00000549354 FGFRL1Q8N441 504 aa9.29□□□□□ -0.92
LINC00661-204ENST00000549354 OR5D13Q8NGL4 314 aa9.29□□□□□ -0.92
LINC00661-204ENST00000549354 SLC25A40Q8TBP6 338 aa9.29□□□□□ -0.92
LINC00661-204ENST00000549354 CDH20Q9HBT6 801 aa9.29□□□□□ -0.92
LINC00661-204ENST00000549354 CD81P60033 236 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 RPL30P62888 115 aaKnown RBP9.28□□□□□ -0.92
LINC00661-204ENST00000549354 BSXQ3C1V8 233 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 OR5A2Q8NGI9 324 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 NINJ1Q92982 152 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 DERL1Q9BUN8 251 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 DYSFO75923 2080 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 FAM90A10PA6NDY2 464 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 FAM90A18PA6NE21 464 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 FAM90A16PA6NEW6 464 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 FAM90A20PA6NIJ5 464 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 FAM90A8PA6NJQ4 464 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 FAM90A7PA6NKC0 464 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 FAM90A22PA8MWA6 464 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 FAM90A12PA8MX19 464 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 FAM90A5PA8MXJ8 464 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 FAM90A23PA8MXZ1 464 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 S1PR2O95136 353 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 CRYABP02511 175 aaKnown RBP9.28□□□□□ -0.92
LINC00661-204ENST00000549354 FAM90A15PP0C7V4 464 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 FAM90A13PP0C7W8 464 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 FAM90A14PP0C7W9 464 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 FAM90A24PP0C7X0 464 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 GZMBP10144 247 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 TMEM241Q24JQ0 296 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 ZNF324BQ6AW86 544 aaPredicted RBP9.28□□□□□ -0.92
LINC00661-204ENST00000549354 ACSM6Q6P461 480 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 ZCCHC24Q8N2G6 241 aaKnown RBP9.28□□□□□ -0.92
LINC00661-204ENST00000549354 WDR31Q8NA23 367 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 SCCPDHQ8NBX0 429 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 OR13D1Q8NGV5 346 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 OR5B12Q96R08 314 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms