RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 ELOVL5Q9NYP7 299 aa11.51□□□□□ -0.57
HDAC7-228ENST00000548938 FAM186AA6NE01 2351 aa11.51□□□□□ -0.57
HDAC7-228ENST00000548938 TRBV20OR9-2A0A075B6H5 130 aa11.51□□□□□ -0.57
HDAC7-228ENST00000548938 TMPRSS2O15393 492 aa11.51□□□□□ -0.57
HDAC7-228ENST00000548938 CD99P14209 185 aa11.51□□□□□ -0.57
HDAC7-228ENST00000548938 ZNF705AQ6ZN79 300 aaPredicted RBP11.51□□□□□ -0.57
HDAC7-228ENST00000548938 TMPRSS7Q7RTY8 843 aa11.51□□□□□ -0.57
HDAC7-228ENST00000548938 Q8N7P7 452 aa11.51□□□□□ -0.57
HDAC7-228ENST00000548938 R3HDM4Q96D70 268 aa11.51□□□□□ -0.57
HDAC7-228ENST00000548938 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.51□□□□□ -0.57
HDAC7-228ENST00000548938 MBNL3Q9NUK0 354 aaKnown RBP11.51□□□□□ -0.57
HDAC7-228ENST00000548938 CBY1Q9Y3M2 126 aa11.51□□□□□ -0.57
HDAC7-228ENST00000548938 HPRT1P00492 218 aa11.5□□□□□ -0.57
HDAC7-228ENST00000548938 CELA3AP09093 270 aa11.5□□□□□ -0.57
HDAC7-228ENST00000548938 BRWD1-AS2P59051 145 aa11.5□□□□□ -0.57
HDAC7-228ENST00000548938 TOMM20LQ6UXN7 152 aa11.5□□□□□ -0.57
HDAC7-228ENST00000548938 ZNF645Q8N7E2 425 aa11.5□□□□□ -0.57
HDAC7-228ENST00000548938 CMTM2Q8TAZ6 248 aa11.5□□□□□ -0.57
HDAC7-228ENST00000548938 IMMP2LQ96T52 175 aa11.5□□□□□ -0.57
HDAC7-228ENST00000548938 IL17BQ9UHF5 180 aa11.5□□□□□ -0.57
HDAC7-228ENST00000548938 C17orf98A8MV24 154 aa11.5□□□□□ -0.57
HDAC7-228ENST00000548938 PDE6DO43924 150 aa11.5□□□□□ -0.57
HDAC7-228ENST00000548938 HNF1AP20823 631 aa11.5□□□□□ -0.57
HDAC7-228ENST00000548938 CD82P27701 267 aa11.5□□□□□ -0.57
HDAC7-228ENST00000548938 CEBPDP49716 269 aaPredicted RBP11.5□□□□□ -0.57
HDAC7-228ENST00000548938 VWC2Q2TAL6 325 aa11.5□□□□□ -0.57
HDAC7-228ENST00000548938 TDRG1Q3Y452 100 aa11.5□□□□□ -0.57
HDAC7-228ENST00000548938 PLA2G2CQ5R387 149 aa11.5□□□□□ -0.57
HDAC7-228ENST00000548938 SFRP2Q96HF1 295 aa11.5□□□□□ -0.57
HDAC7-228ENST00000548938 TMEM204Q9BSN7 226 aa11.5□□□□□ -0.57
HDAC7-228ENST00000548938 RBMXL2O75526 392 aaKnown RBP11.49□□□□□ -0.57
HDAC7-228ENST00000548938 SOX8P57073 446 aa11.49□□□□□ -0.57
HDAC7-228ENST00000548938 PLP2Q04941 152 aa11.49□□□□□ -0.57
HDAC7-228ENST00000548938 FOXL1Q12952 345 aa11.49□□□□□ -0.57
HDAC7-228ENST00000548938 SSPNQ14714 243 aa11.49□□□□□ -0.57
HDAC7-228ENST00000548938 DCAF10Q5QP82 559 aa11.49□□□□□ -0.57
HDAC7-228ENST00000548938 Q6ZWC4 215 aa11.49□□□□□ -0.57
HDAC7-228ENST00000548938 PPP1R32Q7Z5V6 425 aa11.49□□□□□ -0.57
HDAC7-228ENST00000548938 LOXL4Q96JB6 756 aa11.49□□□□□ -0.57
HDAC7-228ENST00000548938 TP53TG3Q9ULZ0 132 aa11.49□□□□□ -0.57
HDAC7-228ENST00000548938 MT-CO3P00414 261 aa11.49□□□□□ -0.57
HDAC7-228ENST00000548938 LINC00310P59036 64 aa11.49□□□□□ -0.57
HDAC7-228ENST00000548938 LINC00205P59089 165 aa11.49□□□□□ -0.57
HDAC7-228ENST00000548938 TMEM208Q9BTX3 173 aa11.49□□□□□ -0.57
HDAC7-228ENST00000548938 WIPI2Q9Y4P8 454 aa11.49□□□□□ -0.57
HDAC7-228ENST00000548938 C17orf112F2Z3M2 114 aa11.48□□□□□ -0.57
HDAC7-228ENST00000548938 ARR3P36575 388 aa11.48□□□□□ -0.57
HDAC7-228ENST00000548938 OR3A1P47881 315 aa11.48□□□□□ -0.57
HDAC7-228ENST00000548938 EDDM3BP56851 147 aa11.48□□□□□ -0.57
HDAC7-228ENST00000548938 SPINK14Q6IE38 97 aa11.48□□□□□ -0.57
HDAC7-228ENST00000548938 SCCPDHQ8NBX0 429 aa11.48□□□□□ -0.57
HDAC7-228ENST00000548938 OR52L2PQ8NGH6 319 aa11.48□□□□□ -0.57
HDAC7-228ENST00000548938 ZDHHC11Q9H8X9 412 aa11.48□□□□□ -0.57
HDAC7-228ENST00000548938 KCNIP2Q9NS61 270 aa11.48□□□□□ -0.57
HDAC7-228ENST00000548938 TMEM106BQ9NUM4 274 aa11.48□□□□□ -0.57
HDAC7-228ENST00000548938 MDFIC2A0A1B0GVS7 189 aa11.48□□□□□ -0.57
HDAC7-228ENST00000548938 F6UZH7 168 aa11.48□□□□□ -0.57
HDAC7-228ENST00000548938 CDX4O14627 284 aaPredicted RBP11.48□□□□□ -0.57
HDAC7-228ENST00000548938 YPEL1O60688 119 aa11.48□□□□□ -0.57
HDAC7-228ENST00000548938 IRF2P14316 349 aa11.48□□□□□ -0.57
HDAC7-228ENST00000548938 SELEP16581 610 aa11.48□□□□□ -0.57
HDAC7-228ENST00000548938 CBLN1P23435 193 aa11.48□□□□□ -0.57
HDAC7-228ENST00000548938 LHX2P50458 406 aa11.48□□□□□ -0.57
HDAC7-228ENST00000548938 EIF4EBP1Q13541 118 aaPredicted RBP11.48□□□□□ -0.57
HDAC7-228ENST00000548938 VASH2Q86V25 355 aa11.48□□□□□ -0.57
HDAC7-228ENST00000548938 YPEL2Q96QA6 119 aa11.48□□□□□ -0.57
HDAC7-228ENST00000548938 DIRC2Q96SL1 478 aa11.48□□□□□ -0.57
HDAC7-228ENST00000548938 PATZ1Q9HBE1 687 aaKnown RBP11.48□□□□□ -0.57
HDAC7-228ENST00000548938 GTF3C1Q12789 2109 aa11.48□□□□□ -0.57
HDAC7-228ENST00000548938 KNTC1P50748 2209 aa11.47□□□□□ -0.57
HDAC7-228ENST00000548938 C12orf77C9JDV5 145 aa11.47□□□□□ -0.57
HDAC7-228ENST00000548938 NXPH2O95156 264 aa11.47□□□□□ -0.57
HDAC7-228ENST00000548938 RPLP1P05386 114 aaKnown RBP11.47□□□□□ -0.57
HDAC7-228ENST00000548938 SERPINA7P05543 415 aa11.47□□□□□ -0.57
HDAC7-228ENST00000548938 CD59P13987 128 aa11.47□□□□□ -0.57
HDAC7-228ENST00000548938 RAC2P15153 192 aa11.47□□□□□ -0.57
HDAC7-228ENST00000548938 CYB561P49447 251 aa11.47□□□□□ -0.57
HDAC7-228ENST00000548938 UBE2NP61088 152 aaKnown RBP11.47□□□□□ -0.57
HDAC7-228ENST00000548938 ERVK11-1P61568 191 aa11.47□□□□□ -0.57
HDAC7-228ENST00000548938 TPTE2P1Q5T6R2 138 aa11.47□□□□□ -0.57
HDAC7-228ENST00000548938 APH1AQ96BI3 265 aa11.47□□□□□ -0.57
HDAC7-228ENST00000548938 BTF3L4Q96K17 158 aa11.47□□□□□ -0.57
HDAC7-228ENST00000548938 PARD6AQ9NPB6 346 aa11.47□□□□□ -0.57
HDAC7-228ENST00000548938 C15orf62A8K5M9 175 aa11.47□□□□□ -0.57
HDAC7-228ENST00000548938 CDIPTO14735 213 aa11.47□□□□□ -0.57
HDAC7-228ENST00000548938 DLEU1O43261 78 aa11.47□□□□□ -0.57
HDAC7-228ENST00000548938 NPSP0C0P6 89 aa11.47□□□□□ -0.57
HDAC7-228ENST00000548938 CDKN1AP38936 164 aa11.47□□□□□ -0.57
HDAC7-228ENST00000548938 THBS3P49746 956 aa11.47□□□□□ -0.57
HDAC7-228ENST00000548938 CLDN18P56856 261 aa11.47□□□□□ -0.57
HDAC7-228ENST00000548938 HOXA4Q00056 320 aaPredicted RBP11.47□□□□□ -0.57
HDAC7-228ENST00000548938 H2BFWTQ7Z2G1 175 aa11.47□□□□□ -0.57
HDAC7-228ENST00000548938 MCEMP1Q8IX19 187 aa11.47□□□□□ -0.57
HDAC7-228ENST00000548938 CIB3Q96Q77 187 aaPredicted RBP11.47□□□□□ -0.57
HDAC7-228ENST00000548938 RTL8AQ9BWD3 113 aa11.47□□□□□ -0.57
HDAC7-228ENST00000548938 WDR83OSQ9Y284 106 aa11.47□□□□□ -0.57
HDAC7-228ENST00000548938 MRPS18CQ9Y3D5 142 aaKnown RBP11.47□□□□□ -0.57
HDAC7-228ENST00000548938 AHCTF1Q8WYP5 2266 aa11.47□□□□□ -0.57
HDAC7-228ENST00000548938 SCO2A0A1W2PP80 73 aa11.46□□□□□ -0.57
HDAC7-228ENST00000548938 MARCH11A6NNE9 402 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms