RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 OR10A7Q8NGE5 316 aa15.39■□□□□ 0.05
VDR-204ENST00000547065 DDB2Q92466 427 aa15.39■□□□□ 0.05
VDR-204ENST00000547065 LEAP2Q969E1 77 aa15.39■□□□□ 0.05
VDR-204ENST00000547065 ADTRPQ96IZ2 230 aa15.39■□□□□ 0.05
VDR-204ENST00000547065 MS4A5Q9H3V2 200 aa15.39■□□□□ 0.05
VDR-204ENST00000547065 LINC00312Q9Y6C7 94 aa15.39■□□□□ 0.05
VDR-204ENST00000547065 PTPRQQ9UMZ3 2332 aa15.38■□□□□ 0.05
VDR-204ENST00000547065 CEBPZOSA8MTT3 80 aa15.38■□□□□ 0.05
VDR-204ENST00000547065 CD3EP07766 207 aa15.38■□□□□ 0.05
VDR-204ENST00000547065 NQO2P16083 231 aa15.38■□□□□ 0.05
VDR-204ENST00000547065 APOBEC3AP31941 199 aaPredicted RBP15.38■□□□□ 0.05
VDR-204ENST00000547065 THBS3P49746 956 aa15.38■□□□□ 0.05
VDR-204ENST00000547065 SERF2P84101 59 aa15.38■□□□□ 0.05
VDR-204ENST00000547065 WDR61Q9GZS3 305 aaKnown RBP15.38■□□□□ 0.05
VDR-204ENST00000547065 TMEM106BQ9NUM4 274 aa15.38■□□□□ 0.05
VDR-204ENST00000547065 SLC25A10Q9UBX3 287 aaPredicted RBP15.38■□□□□ 0.05
VDR-204ENST00000547065 NDRG3Q9UGV2 375 aa15.38■□□□□ 0.05
VDR-204ENST00000547065 RPUSD1Q9UJJ7 312 aaKnown RBP15.38■□□□□ 0.05
VDR-204ENST00000547065 PLCE1Q9P212 2302 aa15.38■□□□□ 0.05
VDR-204ENST00000547065 ZG16O60844 167 aa15.37■□□□□ 0.05
VDR-204ENST00000547065 F12P00748 615 aaPredicted RBP15.37■□□□□ 0.05
VDR-204ENST00000547065 OR9G9P0C7N8 305 aa15.37■□□□□ 0.05
VDR-204ENST00000547065 CHRNB4P30926 498 aa15.37■□□□□ 0.05
VDR-204ENST00000547065 CCL20P78556 96 aa15.37■□□□□ 0.05
VDR-204ENST00000547065 MRPS11P82912 194 aaKnown RBP15.37■□□□□ 0.05
VDR-204ENST00000547065 EFNB3Q15768 340 aa15.37■□□□□ 0.05
VDR-204ENST00000547065 UTF1Q5T230 341 aa15.37■□□□□ 0.05
VDR-204ENST00000547065 PRAMEF5Q5TYX0 476 aa15.37■□□□□ 0.05
VDR-204ENST00000547065 OR8G2PQ6IF36 304 aa15.37■□□□□ 0.05
VDR-204ENST00000547065 KDF1Q8NAX2 398 aaPredicted RBP15.37■□□□□ 0.05
VDR-204ENST00000547065 OR4A16Q8NH70 328 aa15.37■□□□□ 0.05
VDR-204ENST00000547065 OR4S2Q8NH73 311 aa15.37■□□□□ 0.05
VDR-204ENST00000547065 RSG1Q9BU20 258 aa15.37■□□□□ 0.05
VDR-204ENST00000547065 QTRT1Q9BXR0 403 aaKnown RBP15.37■□□□□ 0.05
VDR-204ENST00000547065 SLC35B3Q9H1N7 401 aa15.37■□□□□ 0.05
VDR-204ENST00000547065 DYNLRB1Q9NP97 96 aa15.37■□□□□ 0.05
VDR-204ENST00000547065 DYSFO75923 2080 aa15.37■□□□□ 0.05
VDR-204ENST00000547065 DSCAMO60469 2012 aa15.37■□□□□ 0.05
VDR-204ENST00000547065 TRAV1-1A0A0B4J248 108 aa15.36■□□□□ 0.05
VDR-204ENST00000547065 A0A1B0GV50 99 aa15.36■□□□□ 0.05
VDR-204ENST00000547065 GPR37O15354 613 aa15.36■□□□□ 0.05
VDR-204ENST00000547065 SCAF4O95104 1147 aaKnown RBP15.36■□□□□ 0.05
VDR-204ENST00000547065 NPBWR1P48145 328 aa15.36■□□□□ 0.05
VDR-204ENST00000547065 SPCS3P61009 180 aa15.36■□□□□ 0.05
VDR-204ENST00000547065 DHRS7BQ6IAN0 325 aaPredicted RBP15.36■□□□□ 0.05
VDR-204ENST00000547065 C1orf229Q6ZS94 237 aaPredicted RBP15.36■□□□□ 0.05
VDR-204ENST00000547065 OR52E5Q8NH55 327 aa15.36■□□□□ 0.05
VDR-204ENST00000547065 SFT2D1Q8WV19 159 aa15.36■□□□□ 0.05
VDR-204ENST00000547065 CCL17Q92583 94 aa15.36■□□□□ 0.05
VDR-204ENST00000547065 TAF15Q92804 592 aaKnown RBP eCLIP15.36■□□□□ 0.05
VDR-204ENST00000547065 PINX1Q96BK5 328 aaKnown RBP15.36■□□□□ 0.05
VDR-204ENST00000547065 GAL3ST2Q9H3Q3 398 aa15.36■□□□□ 0.05
VDR-204ENST00000547065 KIAA1456Q9P272 454 aa15.36■□□□□ 0.05
VDR-204ENST00000547065 USF3Q68DE3 2245 aa15.36■□□□□ 0.05
VDR-204ENST00000547065 ATMQ13315 3056 aa15.36■□□□□ 0.05
VDR-204ENST00000547065 SAA2-SAA4A0A096LPE2 208 aa15.36■□□□□ 0.05
VDR-204ENST00000547065 LOC105371267A0A1B0GV96 52 aa15.36■□□□□ 0.05
VDR-204ENST00000547065 A0A1W2PPE3 182 aa15.36■□□□□ 0.05
VDR-204ENST00000547065 RBFOX3A6NFN3 312 aa15.36■□□□□ 0.05
VDR-204ENST00000547065 PMS2P5A8MQ11 134 aa15.36■□□□□ 0.05
VDR-204ENST00000547065 B9A039 149 aa15.36■□□□□ 0.05
VDR-204ENST00000547065 CCL21O00585 134 aa15.36■□□□□ 0.05
VDR-204ENST00000547065 TNFRSF13BO14836 293 aaPredicted RBP15.36■□□□□ 0.05
VDR-204ENST00000547065 SAA2P0DJI9 122 aaPredicted RBP15.36■□□□□ 0.05
VDR-204ENST00000547065 GNB2P62879 340 aa15.36■□□□□ 0.05
VDR-204ENST00000547065 CLRN3Q8NCR9 226 aa15.36■□□□□ 0.05
VDR-204ENST00000547065 OR10P1Q8NGE3 313 aa15.36■□□□□ 0.05
VDR-204ENST00000547065 NEUROG1Q92886 237 aa15.36■□□□□ 0.05
VDR-204ENST00000547065 ZDHHC16Q969W1 377 aa15.36■□□□□ 0.05
VDR-204ENST00000547065 RBMXL1Q96E39 390 aaKnown RBP15.36■□□□□ 0.05
VDR-204ENST00000547065 ZNF251Q9BRH9 671 aa15.36■□□□□ 0.05
VDR-204ENST00000547065 TMEM147Q9BVK8 224 aa15.36■□□□□ 0.05
VDR-204ENST00000547065 TIMM9Q9Y5J7 89 aa15.36■□□□□ 0.05
VDR-204ENST00000547065 IFNA17P01571 189 aa15.35■□□□□ 0.05
VDR-204ENST00000547065 SLC25A48Q6ZT89 311 aaKnown RBP15.35■□□□□ 0.05
VDR-204ENST00000547065 CENPVQ7Z7K6 275 aaPredicted RBP15.35■□□□□ 0.05
VDR-204ENST00000547065 LYG1Q8N1E2 194 aa15.35■□□□□ 0.05
VDR-204ENST00000547065 ICE1Q9Y2F5 2266 aa15.35■□□□□ 0.05
VDR-204ENST00000547065 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.34■□□□□ 0.05
VDR-204ENST00000547065 RPL31P62899 125 aaKnown RBP15.34■□□□□ 0.05
VDR-204ENST00000547065 RPP30P78346 268 aaKnown RBP15.34■□□□□ 0.05
VDR-204ENST00000547065 PDLIM3Q53GG5 364 aaPredicted RBP15.34■□□□□ 0.05
VDR-204ENST00000547065 SSX9Q7RTT3 188 aa15.34■□□□□ 0.05
VDR-204ENST00000547065 CLCC1Q96S66 551 aa15.34■□□□□ 0.05
VDR-204ENST00000547065 RPRMQ9NS64 109 aa15.34■□□□□ 0.05
VDR-204ENST00000547065 NDUFB3O43676 98 aa15.34■□□□□ 0.05
VDR-204ENST00000547065 MMP23AO75900 390 aa15.34■□□□□ 0.05
VDR-204ENST00000547065 ATF4P18848 351 aaPredicted RBP15.34■□□□□ 0.05
VDR-204ENST00000547065 RELBQ01201 579 aa15.34■□□□□ 0.05
VDR-204ENST00000547065 LINC01560Q8TB33 94 aa15.34■□□□□ 0.05
VDR-204ENST00000547065 MBD3L1Q8WWY6 194 aa15.34■□□□□ 0.05
VDR-204ENST00000547065 UBE2L5PA0A1B0GUS4 154 aa15.33■□□□□ 0.04
VDR-204ENST00000547065 FAM90A27PA6NNH2 459 aa15.33■□□□□ 0.04
VDR-204ENST00000547065 DAOP14920 347 aa15.33■□□□□ 0.04
VDR-204ENST00000547065 GNG10P50151 68 aa15.33■□□□□ 0.04
VDR-204ENST00000547065 OR2B8PP59922 312 aa15.33■□□□□ 0.04
VDR-204ENST00000547065 TMEM41BQ5BJD5 291 aa15.33■□□□□ 0.04
VDR-204ENST00000547065 LRRC10Q5BKY1 277 aa15.33■□□□□ 0.04
VDR-204ENST00000547065 ZNF383Q8NA42 475 aa15.33■□□□□ 0.04
VDR-204ENST00000547065 RARRES2Q99969 163 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms