RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 INO80CQ6PI98 192 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-225ENST00000545920 TEPPQ6URK8 271 aa5.42□□□□□ -1.54
SNHG1-225ENST00000545920 H2BFWTQ7Z2G1 175 aa5.42□□□□□ -1.54
SNHG1-225ENST00000545920 TMEM144Q7Z5S9 345 aa5.42□□□□□ -1.54
SNHG1-225ENST00000545920 GBGT1Q8N5D6 347 aa5.42□□□□□ -1.54
SNHG1-225ENST00000545920 TMEM190Q8WZ59 177 aa5.42□□□□□ -1.54
SNHG1-225ENST00000545920 NPCDR1Q9BY65 106 aa5.42□□□□□ -1.54
SNHG1-225ENST00000545920 OR51B6Q9H340 312 aa5.42□□□□□ -1.54
SNHG1-225ENST00000545920 AKIRIN1Q9H9L7 192 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-225ENST00000545920 OBP2BQ9NPH6 170 aa5.42□□□□□ -1.54
SNHG1-225ENST00000545920 DEPPQ9NTK1 212 aa5.42□□□□□ -1.54
SNHG1-225ENST00000545920 PPP1R14DQ9NXH3 145 aa5.42□□□□□ -1.54
SNHG1-225ENST00000545920 WDR83OSQ9Y284 106 aa5.42□□□□□ -1.54
SNHG1-225ENST00000545920 TRGV8A0A0C4DH27 118 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 A0A0G2JMM0 328 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 A0A1B0GWJ7 208 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 A0A1W2PPB8 328 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 A0A1W2PRS3 328 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 KIR3DP1A8MWS1 328 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 A8MXE2 369 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 C9JCJ5 164 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 C11orf94C9JXX5 98 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 H3BP45 60 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 KLRC4-KLRK1H3BQV0 150 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 CDIPTO14735 213 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 SPINT2O43291 252 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 CXorf1O96002 111 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 HAND1O96004 215 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 KRASP01116 189 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 PDGFBP01127 241 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-225ENST00000545920 NGFP01138 241 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 MT-ND6P03923 174 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 CCL4P13236 92 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 AREGP15514 252 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 CCNOP22674 350 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 OR10J1P30954 320 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 OTX2P32243 289 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 WNT5AP41221 380 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 ERVFC1-1P60608 527 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 SELENOTP62341 195 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 Q0VFX4 171 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 RAB31Q13636 194 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 ZNF766Q5HY98 468 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 C1orf194Q5T5A4 169 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 ACSM6Q6P461 480 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 LINC01551Q86U37 167 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 TUSC5Q8IXB3 177 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 SCCPDHQ8NBX0 429 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-225ENST00000545920 NAXEQ8NCW5 288 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 OR4F5Q8NH21 305 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 CT55Q8WUE5 264 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 IL1F10Q8WWZ1 152 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 C11orf52Q96A22 123 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 RPUSD4Q96CM3 377 aaKnown RBP5.41□□□□□ -1.54
SNHG1-225ENST00000545920 WDYHV1Q96HA8 205 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 OR4F4Q96R69 305 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 C19orf24Q9BVV8 132 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 SPRY4Q9C004 299 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 CXXC4Q9H2H0 198 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 VSIRQ9H7M9 311 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 OR1A1Q9P1Q5 309 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 PPP1R3CQ9UQK1 317 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 PXMP4Q9Y6I8 212 aa5.41□□□□□ -1.54
SNHG1-225ENST00000545920 KNL1Q8NG31 2342 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 KIR2DL5BA0A0G2JN68 375 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 KIR2DL5BA0A0G2JPC4 375 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 MDFIC2A0A1B0GVS7 189 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 A0A1W2PPV4 95 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 ODAMA1E959 279 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 M0R143 59 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 MMP23AO75900 390 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 NEURL1O76050 574 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 HPRT1P00492 218 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 GZMHP20718 246 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 KITLGP21583 273 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 CA6P23280 308 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 CFHR2P36980 270 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 FGF8P55075 233 aaPredicted RBP5.4□□□□□ -1.54
SNHG1-225ENST00000545920 ELLP55199 621 aaPredicted RBP5.4□□□□□ -1.54
SNHG1-225ENST00000545920 SOX8P57073 446 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 TPPP2P59282 170 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 RPL15P61313 204 aaKnown RBP5.4□□□□□ -1.54
SNHG1-225ENST00000545920 ERVK-16P61578 105 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 CR1LQ2VPA4 569 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 SMIM21Q3B7S5 101 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 GFI1BQ5VTD9 330 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 CYB5R2Q6BCY4 276 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 OR8G2PQ6IF36 304 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 SSX7Q7RTT5 188 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 KIR2DL5AQ8N109 375 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 PNKDQ8N490 385 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 R3HDM4Q96D70 268 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 ADTRPQ96IZ2 230 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 THOC3Q96J01 351 aaKnown RBP5.4□□□□□ -1.54
SNHG1-225ENST00000545920 FER1L6-AS2Q96M78 137 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 UHRF2Q96PU4 802 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 C20orf144Q9BQM9 153 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 PCGF1Q9BSM1 259 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 TTTY12Q9BZ98 90 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms