RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 LRRC75BQ2VPJ9 315 aa11.65□□□□□ -0.54
LDB3-207ENST00000542786 SPANXN5Q5MJ07 72 aa11.65□□□□□ -0.54
LDB3-207ENST00000542786 PRAMEF5Q5TYX0 476 aa11.65□□□□□ -0.54
LDB3-207ENST00000542786 LINC01560Q8TB33 94 aa11.65□□□□□ -0.54
LDB3-207ENST00000542786 PPIAL4AQ9Y536 164 aa11.65□□□□□ -0.54
LDB3-207ENST00000542786 hADV38S2A0JD32 116 aa11.64□□□□□ -0.55
LDB3-207ENST00000542786 TMPRSS2O15393 492 aa11.64□□□□□ -0.55
LDB3-207ENST00000542786 ZG16O60844 167 aa11.64□□□□□ -0.55
LDB3-207ENST00000542786 SFTA3P0C7M3 94 aa11.64□□□□□ -0.55
LDB3-207ENST00000542786 PDLIM3Q53GG5 364 aaPredicted RBP11.64□□□□□ -0.55
LDB3-207ENST00000542786 SLC25A48Q6ZT89 311 aaKnown RBP11.64□□□□□ -0.55
LDB3-207ENST00000542786 C1orf87Q8N0U7 546 aa11.64□□□□□ -0.55
LDB3-207ENST00000542786 ZDHHC16Q969W1 377 aa11.64□□□□□ -0.55
LDB3-207ENST00000542786 QTRT1Q9BXR0 403 aaKnown RBP11.64□□□□□ -0.55
LDB3-207ENST00000542786 NKX6-2Q9C056 277 aaPredicted RBP11.64□□□□□ -0.55
LDB3-207ENST00000542786 CTSZQ9UBR2 303 aa11.64□□□□□ -0.55
LDB3-207ENST00000542786 SLC25A10Q9UBX3 287 aaPredicted RBP11.64□□□□□ -0.55
LDB3-207ENST00000542786 ARFGEF3Q5TH69 2177 aa11.64□□□□□ -0.55
LDB3-207ENST00000542786 DIDO1Q9BTC0 2240 aaKnown RBP11.64□□□□□ -0.55
LDB3-207ENST00000542786 FAM74A7A6NL05 159 aa11.63□□□□□ -0.55
LDB3-207ENST00000542786 B9A039 149 aa11.63□□□□□ -0.55
LDB3-207ENST00000542786 F8W036 122 aa11.63□□□□□ -0.55
LDB3-207ENST00000542786 CCL20P78556 96 aa11.63□□□□□ -0.55
LDB3-207ENST00000542786 FAM74A3Q4VXF1 159 aa11.63□□□□□ -0.55
LDB3-207ENST00000542786 LYPD2Q6UXB3 125 aa11.63□□□□□ -0.55
LDB3-207ENST00000542786 DPPA3Q6W0C5 159 aa11.63□□□□□ -0.55
LDB3-207ENST00000542786 SVBPQ8N300 66 aa11.63□□□□□ -0.55
LDB3-207ENST00000542786 ZNF383Q8NA42 475 aa11.63□□□□□ -0.55
LDB3-207ENST00000542786 OR10A7Q8NGE5 316 aa11.63□□□□□ -0.55
LDB3-207ENST00000542786 DTD1Q8TEA8 209 aa11.63□□□□□ -0.55
LDB3-207ENST00000542786 ZCCHC14Q8WYQ9 949 aaKnown RBP11.63□□□□□ -0.55
LDB3-207ENST00000542786 PSMG3Q9BT73 122 aaPredicted RBP11.63□□□□□ -0.55
LDB3-207ENST00000542786 ATRXP46100 2492 aa11.63□□□□□ -0.55
LDB3-207ENST00000542786 PKDREJQ9NTG1 2253 aa11.63□□□□□ -0.55
LDB3-207ENST00000542786 IFNA5P01569 189 aa11.63□□□□□ -0.55
LDB3-207ENST00000542786 HBG1P69891 147 aa11.63□□□□□ -0.55
LDB3-207ENST00000542786 HBG2P69892 147 aa11.63□□□□□ -0.55
LDB3-207ENST00000542786 MRPS11P82912 194 aaKnown RBP11.63□□□□□ -0.55
LDB3-207ENST00000542786 RELBQ01201 579 aa11.63□□□□□ -0.55
LDB3-207ENST00000542786 SLC38A11Q08AI6 406 aa11.63□□□□□ -0.55
LDB3-207ENST00000542786 GUK1Q16774 197 aa11.63□□□□□ -0.55
LDB3-207ENST00000542786 TMEM200BQ69YZ2 307 aa11.63□□□□□ -0.55
LDB3-207ENST00000542786 THNSL2Q86YJ6 484 aa11.63□□□□□ -0.55
LDB3-207ENST00000542786 RSG1Q9BU20 258 aa11.63□□□□□ -0.55
LDB3-207ENST00000542786 WDR61Q9GZS3 305 aaKnown RBP11.63□□□□□ -0.55
LDB3-207ENST00000542786 MS4A5Q9H3V2 200 aa11.63□□□□□ -0.55
LDB3-207ENST00000542786 PRORYQ9H606 182 aa11.63□□□□□ -0.55
LDB3-207ENST00000542786 DYNLRB1Q9NP97 96 aa11.63□□□□□ -0.55
LDB3-207ENST00000542786 KAAG1Q9UBP8 84 aa11.63□□□□□ -0.55
LDB3-207ENST00000542786 PRELID3BQ9Y3B1 194 aa11.63□□□□□ -0.55
LDB3-207ENST00000542786 NBEAQ8NFP9 2946 aa11.62□□□□□ -0.55
LDB3-207ENST00000542786 F12P00748 615 aaPredicted RBP11.62□□□□□ -0.55
LDB3-207ENST00000542786 ARG1P05089 322 aa11.62□□□□□ -0.55
LDB3-207ENST00000542786 NDUFB7P17568 137 aa11.62□□□□□ -0.55
LDB3-207ENST00000542786 NFYBP25208 207 aa11.62□□□□□ -0.55
LDB3-207ENST00000542786 THBS3P49746 956 aa11.62□□□□□ -0.55
LDB3-207ENST00000542786 DLX6P56179 175 aa11.62□□□□□ -0.55
LDB3-207ENST00000542786 POU2AF1Q16633 256 aa11.62□□□□□ -0.55
LDB3-207ENST00000542786 VWC2Q2TAL6 325 aa11.62□□□□□ -0.55
LDB3-207ENST00000542786 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.62□□□□□ -0.55
LDB3-207ENST00000542786 LFNGQ8NES3 379 aa11.62□□□□□ -0.55
LDB3-207ENST00000542786 CCL17Q92583 94 aa11.62□□□□□ -0.55
LDB3-207ENST00000542786 S1PR3Q99500 378 aa11.62□□□□□ -0.55
LDB3-207ENST00000542786 TMEM204Q9BSN7 226 aa11.62□□□□□ -0.55
LDB3-207ENST00000542786 TRAV3A0A0B4J244 114 aa11.61□□□□□ -0.55
LDB3-207ENST00000542786 TRAV1-1A0A0B4J248 108 aa11.61□□□□□ -0.55
LDB3-207ENST00000542786 C15orf62A8K5M9 175 aa11.61□□□□□ -0.55
LDB3-207ENST00000542786 NQO2P16083 231 aa11.61□□□□□ -0.55
LDB3-207ENST00000542786 MDKP21741 143 aaPredicted RBP11.61□□□□□ -0.55
LDB3-207ENST00000542786 OR2B8PP59922 312 aa11.61□□□□□ -0.55
LDB3-207ENST00000542786 RPL31P62899 125 aaKnown RBP11.61□□□□□ -0.55
LDB3-207ENST00000542786 HEPN1Q6WQI6 88 aa11.61□□□□□ -0.55
LDB3-207ENST00000542786 CENPVQ7Z7K6 275 aaPredicted RBP11.61□□□□□ -0.55
LDB3-207ENST00000542786 VKORC1L1Q8N0U8 176 aa11.61□□□□□ -0.55
LDB3-207ENST00000542786 OR52E5Q8NH55 327 aa11.61□□□□□ -0.55
LDB3-207ENST00000542786 OR4S2Q8NH73 311 aa11.61□□□□□ -0.55
LDB3-207ENST00000542786 ADTRPQ96IZ2 230 aa11.61□□□□□ -0.55
LDB3-207ENST00000542786 CIB3Q96Q77 187 aaPredicted RBP11.61□□□□□ -0.55
LDB3-207ENST00000542786 ZNRD1Q9P1U0 126 aa11.61□□□□□ -0.55
LDB3-207ENST00000542786 NDRG3Q9UGV2 375 aa11.61□□□□□ -0.55
LDB3-207ENST00000542786 FBXO7Q9Y3I1 522 aa11.61□□□□□ -0.55
LDB3-207ENST00000542786 NCOR2Q9Y618 2525 aa11.61□□□□□ -0.55
LDB3-207ENST00000542786 IL6RP08887 468 aaPredicted RBP11.61□□□□□ -0.55
LDB3-207ENST00000542786 CCL3L1P16619 93 aa11.61□□□□□ -0.55
LDB3-207ENST00000542786 VDAC2P45880 294 aaPredicted RBP11.61□□□□□ -0.55
LDB3-207ENST00000542786 NPBWR1P48145 328 aa11.61□□□□□ -0.55
LDB3-207ENST00000542786 ERVFRD-1P60508 538 aa11.61□□□□□ -0.55
LDB3-207ENST00000542786 TFF3Q07654 80 aa11.61□□□□□ -0.55
LDB3-207ENST00000542786 SPINK9Q5DT21 86 aa11.61□□□□□ -0.55
LDB3-207ENST00000542786 LYG1Q8N1E2 194 aa11.61□□□□□ -0.55
LDB3-207ENST00000542786 TMEM140Q9NV12 185 aa11.61□□□□□ -0.55
LDB3-207ENST00000542786 HCFC1P51610 2035 aa11.6□□□□□ -0.55
LDB3-207ENST00000542786 IGHV1-69-2A0A0G2JMI3 117 aa11.6□□□□□ -0.55
LDB3-207ENST00000542786 BTBD17A6NE02 478 aa11.6□□□□□ -0.55
LDB3-207ENST00000542786 GPR37O15354 613 aa11.6□□□□□ -0.55
LDB3-207ENST00000542786 CT45A6P0DMU7 189 aa11.6□□□□□ -0.55
LDB3-207ENST00000542786 CT45A5P0DMU8 189 aa11.6□□□□□ -0.55
LDB3-207ENST00000542786 CT45A7P0DMV0 189 aa11.6□□□□□ -0.55
LDB3-207ENST00000542786 GNG10P50151 68 aa11.6□□□□□ -0.55
LDB3-207ENST00000542786 SPCS3P61009 180 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms