RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 TREM1Q9NP99 234 aa0.57□□□□□ -2.32
KNTC1-213ENST00000542727 NRBP2Q9NSY0 501 aa0.57□□□□□ -2.32
KNTC1-213ENST00000542727 PARVAQ9NVD7 372 aa0.57□□□□□ -2.32
KNTC1-213ENST00000542727 CHMP5Q9NZZ3 219 aa0.57□□□□□ -2.32
KNTC1-213ENST00000542727 SOX21Q9Y651 276 aaPredicted RBP0.57□□□□□ -2.32
KNTC1-213ENST00000542727 RP1P56715 2156 aa0.57□□□□□ -2.32
KNTC1-213ENST00000542727 KMT2BQ9UMN6 2715 aaPredicted RBP0.57□□□□□ -2.32
KNTC1-213ENST00000542727 LRPPRCP42704 1394 aaKnown RBP0.57□□□□□ -2.32
KNTC1-213ENST00000542727 NCOA6Q14686 2063 aaPredicted RBP0.57□□□□□ -2.32
KNTC1-213ENST00000542727 IGKV3D-7A0A0C4DH55 119 aa0.56□□□□□ -2.32
KNTC1-213ENST00000542727 IGKV3OR2-268A0A0C4DH90 116 aa0.56□□□□□ -2.32
KNTC1-213ENST00000542727 ZNF879B4DU55 563 aa0.56□□□□□ -2.32
KNTC1-213ENST00000542727 GOLGA8RI6L899 631 aa0.56□□□□□ -2.32
KNTC1-213ENST00000542727 NPYP01303 97 aa0.56□□□□□ -2.32
KNTC1-213ENST00000542727 ATP5G1P05496 136 aa0.56□□□□□ -2.32
KNTC1-213ENST00000542727 LINC00614P0C842 121 aa0.56□□□□□ -2.32
KNTC1-213ENST00000542727 CXCL2P19875 107 aa0.56□□□□□ -2.32
KNTC1-213ENST00000542727 CXCL3P19876 107 aa0.56□□□□□ -2.32
KNTC1-213ENST00000542727 CA5AP35218 305 aa0.56□□□□□ -2.32
KNTC1-213ENST00000542727 AKR1C3P42330 323 aa0.56□□□□□ -2.32
KNTC1-213ENST00000542727 AQP4P55087 323 aa0.56□□□□□ -2.32
KNTC1-213ENST00000542727 HPCAP84074 193 aa0.56□□□□□ -2.32
KNTC1-213ENST00000542727 LGALS9BQ3B8N2 356 aa0.56□□□□□ -2.32
KNTC1-213ENST00000542727 OR10K2Q6IF99 312 aa0.56□□□□□ -2.32
KNTC1-213ENST00000542727 ZNF705AQ6ZN79 300 aaPredicted RBP0.56□□□□□ -2.32
KNTC1-213ENST00000542727 COPS6Q7L5N1 327 aa0.56□□□□□ -2.32
KNTC1-213ENST00000542727 TMA16Q96EY4 203 aaKnown RBP0.56□□□□□ -2.32
KNTC1-213ENST00000542727 ZNF514Q96K75 400 aaPredicted RBP0.56□□□□□ -2.32
KNTC1-213ENST00000542727 RBP7Q96R05 134 aa0.56□□□□□ -2.32
KNTC1-213ENST00000542727 DOHHQ9BU89 302 aa0.56□□□□□ -2.32
KNTC1-213ENST00000542727 TMEM109Q9BVC6 243 aa0.56□□□□□ -2.32
KNTC1-213ENST00000542727 TIPINQ9BVW5 301 aa0.56□□□□□ -2.32
KNTC1-213ENST00000542727 C1orf109Q9NX04 203 aa0.56□□□□□ -2.32
KNTC1-213ENST00000542727 FLT4P35916 1363 aa0.56□□□□□ -2.32
KNTC1-213ENST00000542727 EML5Q05BV3 1969 aa0.56□□□□□ -2.32
KNTC1-213ENST00000542727 IGKV3-7A0A075B6H7 116 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 IGHV3-64A0A075B6Q5 118 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 AZIN1O14977 448 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 NDUFB2O95178 105 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 HLA-DQB2P05538 268 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 PET100P0DJ07 73 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 CD24P25063 80 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 IFNGR2P38484 337 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 CLDN12P56749 244 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 RBM11P57052 281 aaKnown RBP0.55□□□□□ -2.32
KNTC1-213ENST00000542727 TPI1P60174 286 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 AP1S1P61966 158 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 SLAMF1Q13291 335 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 PMS2P3Q13401 168 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 GNA13Q14344 377 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 CDK5R1Q15078 307 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 SURF2Q15527 256 aaPredicted RBP0.55□□□□□ -2.32
KNTC1-213ENST00000542727 USF2Q15853 346 aaPredicted RBP0.55□□□□□ -2.32
KNTC1-213ENST00000542727 C4orf26Q17RF5 130 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 CLEC12BQ2HXU8 276 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 HLA-DRB5Q30154 266 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 SAPCD1Q5SSQ6 148 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 FAM45BPQ6NSW5 357 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 RASSF6Q6ZTQ3 369 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 C7orf65Q6ZTY9 151 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 FP248Q71RG6 208 aaPredicted RBP0.55□□□□□ -2.32
KNTC1-213ENST00000542727 SLC36A1Q7Z2H8 476 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 SPATA24Q86W54 205 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 C17orf78Q8N4C9 275 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 OR1L8Q8NGR8 309 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 STOML3Q8TAV4 291 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 ZNF675Q8TD23 568 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 SMCR5Q8TEV8 140 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 MS4A6EQ96DS6 147 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 IMMP2LQ96T52 175 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 NSRP1Q9H0G5 558 aaKnown RBP0.55□□□□□ -2.32
KNTC1-213ENST00000542727 VCX3BQ9H321 246 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 ZNHIT6Q9NWK9 470 aaKnown RBP0.55□□□□□ -2.32
KNTC1-213ENST00000542727 CFAP45Q9UL16 551 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 TIMM9Q9Y5J7 89 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 PCYT1BQ9Y5K3 369 aaPredicted RBP0.55□□□□□ -2.32
KNTC1-213ENST00000542727 CEP192Q8TEP8 1941 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 RIMS2Q9UQ26 1411 aa0.55□□□□□ -2.32
KNTC1-213ENST00000542727 GLI3P10071 1580 aa0.54□□□□□ -2.32
KNTC1-213ENST00000542727 A0A087WUU8 490 aa0.54□□□□□ -2.32
KNTC1-213ENST00000542727 MEIKINA0A087WXM9 373 aa0.54□□□□□ -2.32
KNTC1-213ENST00000542727 TRAV38-1A0A0B4J264 116 aa0.54□□□□□ -2.32
KNTC1-213ENST00000542727 TRPC5OSA6NMA1 111 aa0.54□□□□□ -2.32
KNTC1-213ENST00000542727 H3BT86 120 aa0.54□□□□□ -2.32
KNTC1-213ENST00000542727 K7ERQ8 282 aa0.54□□□□□ -2.32
KNTC1-213ENST00000542727 CCRL2O00421 344 aa0.54□□□□□ -2.32
KNTC1-213ENST00000542727 ORC5O43913 435 aa0.54□□□□□ -2.32
KNTC1-213ENST00000542727 CREBL2O60519 120 aaPredicted RBP0.54□□□□□ -2.32
KNTC1-213ENST00000542727 NDUFS6O75380 124 aaKnown RBP0.54□□□□□ -2.32
KNTC1-213ENST00000542727 PPBPP02775 128 aa0.54□□□□□ -2.32
KNTC1-213ENST00000542727 IL6P05231 212 aa0.54□□□□□ -2.32
KNTC1-213ENST00000542727 MIPP30301 263 aa0.54□□□□□ -2.32
KNTC1-213ENST00000542727 HADHBP55084 474 aaKnown RBP0.54□□□□□ -2.32
KNTC1-213ENST00000542727 TBPL1P62380 186 aa0.54□□□□□ -2.32
KNTC1-213ENST00000542727 EMX1Q04741 257 aaPredicted RBP0.54□□□□□ -2.32
KNTC1-213ENST00000542727 SYCE1Q8N0S2 351 aa0.54□□□□□ -2.32
KNTC1-213ENST00000542727 RIBC1Q8N443 379 aaPredicted RBP0.54□□□□□ -2.32
KNTC1-213ENST00000542727 OR52E4Q8NGH9 312 aa0.54□□□□□ -2.32
KNTC1-213ENST00000542727 OR10D3Q8NH80 312 aa0.54□□□□□ -2.32
KNTC1-213ENST00000542727 SLC37A2Q8TED4 501 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms