RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 ATG12O94817 140 aa9□□□□□ -0.97
SCG3-202ENST00000542355 SPDEFO95238 335 aa9□□□□□ -0.97
SCG3-202ENST00000542355 HPRT1P00492 218 aa9□□□□□ -0.97
SCG3-202ENST00000542355 IGHV4-39P01824 125 aa9□□□□□ -0.97
SCG3-202ENST00000542355 EXOSC2Q13868 293 aaKnown RBP9□□□□□ -0.97
SCG3-202ENST00000542355 ZNF383Q8NA42 475 aa9□□□□□ -0.97
SCG3-202ENST00000542355 DDB2Q92466 427 aa9□□□□□ -0.97
SCG3-202ENST00000542355 ZNF471Q9BX82 626 aaPredicted RBP9□□□□□ -0.97
SCG3-202ENST00000542355 TMEM133Q9H2Q1 129 aa9□□□□□ -0.97
SCG3-202ENST00000542355 SESN1Q9Y6P5 492 aa9□□□□□ -0.97
SCG3-202ENST00000542355 LOC105371242A0A075B767 164 aa8.99□□□□□ -0.97
SCG3-202ENST00000542355 WRBO00258 174 aa8.99□□□□□ -0.97
SCG3-202ENST00000542355 CHST1O43916 411 aa8.99□□□□□ -0.97
SCG3-202ENST00000542355 SCGB1D1O95968 90 aa8.99□□□□□ -0.97
SCG3-202ENST00000542355 IFNA7P01567 189 aa8.99□□□□□ -0.97
SCG3-202ENST00000542355 LIPFP07098 398 aa8.99□□□□□ -0.97
SCG3-202ENST00000542355 CT45A6P0DMU7 189 aa8.99□□□□□ -0.97
SCG3-202ENST00000542355 CT45A5P0DMU8 189 aa8.99□□□□□ -0.97
SCG3-202ENST00000542355 CT45A7P0DMV0 189 aa8.99□□□□□ -0.97
SCG3-202ENST00000542355 COX6B1P14854 86 aa8.99□□□□□ -0.97
SCG3-202ENST00000542355 THBS3P49746 956 aa8.99□□□□□ -0.97
SCG3-202ENST00000542355 CLEC9AQ6UXN8 241 aa8.99□□□□□ -0.97
SCG3-202ENST00000542355 H2BFWTQ7Z2G1 175 aa8.99□□□□□ -0.97
SCG3-202ENST00000542355 LY6G5BQ8NDX9 201 aa8.99□□□□□ -0.97
SCG3-202ENST00000542355 OR9G1Q8NH87 305 aa8.99□□□□□ -0.97
SCG3-202ENST00000542355 C8orf46Q8TAG6 207 aa8.99□□□□□ -0.97
SCG3-202ENST00000542355 IGFBPL1Q8WX77 278 aa8.99□□□□□ -0.97
SCG3-202ENST00000542355 RNF125Q96EQ8 232 aa8.99□□□□□ -0.97
SCG3-202ENST00000542355 BPESC1Q9GZL8 116 aa8.99□□□□□ -0.97
SCG3-202ENST00000542355 PLEKHA2Q9HB19 425 aa8.99□□□□□ -0.97
SCG3-202ENST00000542355 ONECUT1Q9UBC0 465 aa8.99□□□□□ -0.97
SCG3-202ENST00000542355 FLNCQ14315 2725 aa8.99□□□□□ -0.97
SCG3-202ENST00000542355 DSCAML1Q8TD84 2053 aa8.99□□□□□ -0.97
SCG3-202ENST00000542355 SPTAN1Q13813 2472 aaKnown RBP8.99□□□□□ -0.97
SCG3-202ENST00000542355 DOPEY1Q5JWR5 2465 aa8.99□□□□□ -0.97
SCG3-202ENST00000542355 ARID1AO14497 2285 aa8.99□□□□□ -0.97
SCG3-202ENST00000542355 MARCH11A6NNE9 402 aa8.99□□□□□ -0.97
SCG3-202ENST00000542355 KIAA1324LA8MWY0 1029 aaPredicted RBP8.99□□□□□ -0.97
SCG3-202ENST00000542355 TXNL1O43396 289 aa8.99□□□□□ -0.97
SCG3-202ENST00000542355 PVALBP20472 110 aaPredicted RBP8.99□□□□□ -0.97
SCG3-202ENST00000542355 P2RY1P47900 373 aa8.99□□□□□ -0.97
SCG3-202ENST00000542355 REG1BP48304 166 aa8.99□□□□□ -0.97
SCG3-202ENST00000542355 SAMD5Q5TGI4 173 aa8.99□□□□□ -0.97
SCG3-202ENST00000542355 SSX9Q7RTT3 188 aa8.99□□□□□ -0.97
SCG3-202ENST00000542355 R3HDM4Q96D70 268 aa8.99□□□□□ -0.97
SCG3-202ENST00000542355 YLPM1P49750 1951 aaKnown RBP8.98□□□□□ -0.97
SCG3-202ENST00000542355 TOR1AO14656 332 aa8.98□□□□□ -0.97
SCG3-202ENST00000542355 RBFOX2O43251 390 aaKnown RBP eCLIP8.98□□□□□ -0.97
SCG3-202ENST00000542355 CRYZL1O95825 349 aa8.98□□□□□ -0.97
SCG3-202ENST00000542355 P0C879 139 aa8.98□□□□□ -0.97
SCG3-202ENST00000542355 HTR2BP41595 481 aa8.98□□□□□ -0.97
SCG3-202ENST00000542355 KIR2DS2P43631 304 aa8.98□□□□□ -0.97
SCG3-202ENST00000542355 CAV2P51636 162 aa8.98□□□□□ -0.97
SCG3-202ENST00000542355 ARF6P62330 175 aa8.98□□□□□ -0.97
SCG3-202ENST00000542355 MAJINQ3KP22 176 aa8.98□□□□□ -0.97
SCG3-202ENST00000542355 ALKAL2Q6UX46 152 aa8.98□□□□□ -0.97
SCG3-202ENST00000542355 ZNF833PQ6ZTB9 187 aa8.98□□□□□ -0.97
SCG3-202ENST00000542355 MRPL41Q8IXM3 137 aaKnown RBP8.98□□□□□ -0.97
SCG3-202ENST00000542355 SLC7A5P1Q8MH63 180 aa8.98□□□□□ -0.97
SCG3-202ENST00000542355 VKORC1L1Q8N0U8 176 aa8.98□□□□□ -0.97
SCG3-202ENST00000542355 ADTRPQ96IZ2 230 aa8.98□□□□□ -0.97
SCG3-202ENST00000542355 UBQLN2Q9UHD9 624 aa8.98□□□□□ -0.97
SCG3-202ENST00000542355 USP9XQ93008 2570 aaPredicted RBP8.98□□□□□ -0.97
SCG3-202ENST00000542355 hCG_1809904A0A1W2PP81 198 aa8.97□□□□□ -0.97
SCG3-202ENST00000542355 A0A1W2PPE2 198 aa8.97□□□□□ -0.97
SCG3-202ENST00000542355 A0A1W2PR64 198 aa8.97□□□□□ -0.97
SCG3-202ENST00000542355 A0A1W2PRV1 198 aa8.97□□□□□ -0.97
SCG3-202ENST00000542355 FAM24AA6NFZ4 105 aa8.97□□□□□ -0.97
SCG3-202ENST00000542355 RBMXL2O75526 392 aaKnown RBP8.97□□□□□ -0.97
SCG3-202ENST00000542355 TMEM50AO95807 157 aa8.97□□□□□ -0.97
SCG3-202ENST00000542355 DIAPH2-AS1Q14236 149 aa8.97□□□□□ -0.97
SCG3-202ENST00000542355 LINC00311Q8N616 119 aa8.97□□□□□ -0.97
SCG3-202ENST00000542355 C8orf31Q8N9H6 132 aa8.97□□□□□ -0.97
SCG3-202ENST00000542355 OR4S2Q8NH73 311 aa8.97□□□□□ -0.97
SCG3-202ENST00000542355 ZNF596Q8TC21 504 aa8.97□□□□□ -0.97
SCG3-202ENST00000542355 ST8SIA2Q92186 375 aa8.97□□□□□ -0.97
SCG3-202ENST00000542355 TMEM186Q96B77 213 aa8.97□□□□□ -0.97
SCG3-202ENST00000542355 SMIM3Q9BZL3 60 aa8.97□□□□□ -0.97
SCG3-202ENST00000542355 C11orf1Q9H5F2 150 aa8.97□□□□□ -0.97
SCG3-202ENST00000542355 CYTL1Q9NRR1 136 aa8.97□□□□□ -0.97
SCG3-202ENST00000542355 COA4Q9NYJ1 87 aa8.97□□□□□ -0.97
SCG3-202ENST00000542355 IGHV2-26A0A0B4J1V2 119 aa8.97□□□□□ -0.97
SCG3-202ENST00000542355 GPR137BO60478 399 aa8.97□□□□□ -0.97
SCG3-202ENST00000542355 NQO2P16083 231 aa8.97□□□□□ -0.97
SCG3-202ENST00000542355 ZFP36P26651 326 aaKnown RBP8.97□□□□□ -0.97
SCG3-202ENST00000542355 PDLIM4P50479 330 aa8.97□□□□□ -0.97
SCG3-202ENST00000542355 NHLH2Q02577 135 aa8.97□□□□□ -0.97
SCG3-202ENST00000542355 MIDNQ504T8 468 aa8.97□□□□□ -0.97
SCG3-202ENST00000542355 GPR157Q5UAW9 335 aa8.97□□□□□ -0.97
SCG3-202ENST00000542355 MALRD1Q5VYJ5 2156 aa8.97□□□□□ -0.97
SCG3-202ENST00000542355 NRGNQ92686 78 aa8.97□□□□□ -0.97
SCG3-202ENST00000542355 BSCL2Q96G97 398 aaPredicted RBP8.97□□□□□ -0.97
SCG3-202ENST00000542355 MRPL20Q9BYC9 149 aaKnown RBP8.97□□□□□ -0.97
SCG3-202ENST00000542355 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.97□□□□□ -0.97
SCG3-202ENST00000542355 SLC35D1Q9NTN3 355 aa8.97□□□□□ -0.97
SCG3-202ENST00000542355 SYNGR2O43760 224 aa8.96□□□□□ -0.97
SCG3-202ENST00000542355 IGHV2-5P01817 119 aa8.96□□□□□ -0.97
SCG3-202ENST00000542355 RBP4P02753 201 aa8.96□□□□□ -0.97
SCG3-202ENST00000542355 IGKV1-16P04430 117 aa8.96□□□□□ -0.97
SCG3-202ENST00000542355 COX7A1P24310 79 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms