RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 GZMHP20718 246 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 SRP14P37108 136 aaKnown RBP10.97□□□□□ -0.65
MSH6-210ENST00000540021 OR8I2Q8N0Y5 310 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 SCCPDHQ8NBX0 429 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 TMEM170AQ8WVE7 144 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 LSM10Q969L4 123 aaKnown RBP10.97□□□□□ -0.65
MSH6-210ENST00000540021 HSD17B10Q99714 261 aaKnown RBP10.97□□□□□ -0.65
MSH6-210ENST00000540021 C1QTNF5Q9BXJ0 243 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 CBY1Q9Y3M2 126 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 CHD3Q12873 2000 aaKnown RBP10.97□□□□□ -0.65
MSH6-210ENST00000540021 SPTBN5Q9NRC6 3674 aaKnown RBP10.97□□□□□ -0.65
MSH6-210ENST00000540021 SSTR5P35346 364 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 TFPI2P48307 235 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 GNG4P50150 75 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 FAM53AQ6NSI3 398 aaPredicted RBP10.97□□□□□ -0.65
MSH6-210ENST00000540021 ABHD12Q8N2K0 398 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 MBD3L1Q8WWY6 194 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 FAM173AQ9BQD7 235 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 PCED1AQ9H1Q7 454 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 WDR54Q9H977 334 aa10.97□□□□□ -0.65
MSH6-210ENST00000540021 A8MWP6 167 aa10.96□□□□□ -0.65
MSH6-210ENST00000540021 DNPH1O43598 174 aa10.96□□□□□ -0.65
MSH6-210ENST00000540021 PDE6DO43924 150 aa10.96□□□□□ -0.65
MSH6-210ENST00000540021 PSG5Q15238 335 aa10.96□□□□□ -0.65
MSH6-210ENST00000540021 PRSS8Q16651 343 aa10.96□□□□□ -0.65
MSH6-210ENST00000540021 ZNF324BQ6AW86 544 aaPredicted RBP10.96□□□□□ -0.65
MSH6-210ENST00000540021 PPP1R35Q8TAP8 253 aa10.96□□□□□ -0.65
MSH6-210ENST00000540021 SLC25A40Q8TBP6 338 aa10.96□□□□□ -0.65
MSH6-210ENST00000540021 STARD4Q96DR4 205 aa10.96□□□□□ -0.65
MSH6-210ENST00000540021 MRPL18Q9H0U6 180 aaKnown RBP10.96□□□□□ -0.65
MSH6-210ENST00000540021 LRRC30A6NM36 301 aa10.96□□□□□ -0.65
MSH6-210ENST00000540021 HSBP1O75506 76 aa10.96□□□□□ -0.65
MSH6-210ENST00000540021 AGFG2O95081 481 aa10.96□□□□□ -0.65
MSH6-210ENST00000540021 IGHEP01854 428 aa10.96□□□□□ -0.65
MSH6-210ENST00000540021 PKDREJQ9NTG1 2253 aa10.96□□□□□ -0.65
MSH6-210ENST00000540021 MYO15AQ9UKN7 3530 aa10.96□□□□□ -0.66
MSH6-210ENST00000540021 DIRC3C9JPN6 131 aa10.96□□□□□ -0.66
MSH6-210ENST00000540021 SELLP14151 372 aa10.96□□□□□ -0.66
MSH6-210ENST00000540021 CAMPP49913 170 aa10.96□□□□□ -0.66
MSH6-210ENST00000540021 MRPL14Q6P1L8 145 aaKnown RBP10.96□□□□□ -0.66
MSH6-210ENST00000540021 PXMP4Q9Y6I8 212 aa10.96□□□□□ -0.66
MSH6-210ENST00000540021 HOXA4Q00056 320 aaPredicted RBP10.95□□□□□ -0.66
MSH6-210ENST00000540021 RPEL1Q2QD12 228 aa10.95□□□□□ -0.66
MSH6-210ENST00000540021 HLA-DRB5Q30154 266 aa10.95□□□□□ -0.66
MSH6-210ENST00000540021 Q8IYB0 196 aa10.95□□□□□ -0.66
MSH6-210ENST00000540021 OR5P3Q8WZ94 311 aa10.95□□□□□ -0.66
MSH6-210ENST00000540021 SFRP2Q96HF1 295 aa10.95□□□□□ -0.66
MSH6-210ENST00000540021 IMMP1LQ96LU5 166 aa10.95□□□□□ -0.66
MSH6-210ENST00000540021 TWSG1Q9GZX9 223 aa10.95□□□□□ -0.66
MSH6-210ENST00000540021 HEATR1Q9H583 2144 aaKnown RBP10.95□□□□□ -0.66
MSH6-210ENST00000540021 RNF115Q9Y4L5 304 aa10.95□□□□□ -0.66
MSH6-210ENST00000540021 SCO2A0A1W2PP80 73 aa10.95□□□□□ -0.66
MSH6-210ENST00000540021 IGKV1D-33P01593 117 aa10.95□□□□□ -0.66
MSH6-210ENST00000540021 IGKV1-33P01594 117 aa10.95□□□□□ -0.66
MSH6-210ENST00000540021 OR10J4P0C629 311 aa10.95□□□□□ -0.66
MSH6-210ENST00000540021 GNG10P50151 68 aa10.95□□□□□ -0.66
MSH6-210ENST00000540021 NUTF2P61970 127 aaKnown RBP10.95□□□□□ -0.66
MSH6-210ENST00000540021 RANP62826 216 aaKnown RBP10.95□□□□□ -0.66
MSH6-210ENST00000540021 DMRTA1Q5VZB9 504 aa10.95□□□□□ -0.66
MSH6-210ENST00000540021 TMEM42Q69YG0 159 aa10.95□□□□□ -0.66
MSH6-210ENST00000540021 TEX38Q6PEX7 206 aa10.95□□□□□ -0.66
MSH6-210ENST00000540021 CRIP3Q6Q6R5 217 aa10.95□□□□□ -0.66
MSH6-210ENST00000540021 C11orf42Q8N5U0 333 aa10.95□□□□□ -0.66
MSH6-210ENST00000540021 CT55Q8WUE5 264 aa10.95□□□□□ -0.66
MSH6-210ENST00000540021 DCTN5Q9BTE1 182 aa10.95□□□□□ -0.66
MSH6-210ENST00000540021 DEPPQ9NTK1 212 aa10.95□□□□□ -0.66
MSH6-210ENST00000540021 MARCH11A6NNE9 402 aa10.95□□□□□ -0.66
MSH6-210ENST00000540021 GALR2O43603 387 aaPredicted RBP10.95□□□□□ -0.66
MSH6-210ENST00000540021 PTTG1IPP53801 180 aa10.95□□□□□ -0.66
MSH6-210ENST00000540021 NHLRC2Q8NBF2 726 aa10.95□□□□□ -0.66
MSH6-210ENST00000540021 TMEM242Q9NWH2 141 aa10.95□□□□□ -0.66
MSH6-210ENST00000540021 CD46P15529 392 aa10.94□□□□□ -0.66
MSH6-210ENST00000540021 RND2P52198 227 aa10.94□□□□□ -0.66
MSH6-210ENST00000540021 OR2Z1Q8NG97 314 aa10.94□□□□□ -0.66
MSH6-210ENST00000540021 FAM216AQ8WUB2 273 aa10.94□□□□□ -0.66
MSH6-210ENST00000540021 LEAP2Q969E1 77 aa10.94□□□□□ -0.66
MSH6-210ENST00000540021 QTRT1Q9BXR0 403 aaKnown RBP10.94□□□□□ -0.66
MSH6-210ENST00000540021 NUP210LQ5VU65 1888 aa10.94□□□□□ -0.66
MSH6-210ENST00000540021 TRAV1-1A0A0B4J248 108 aa10.94□□□□□ -0.66
MSH6-210ENST00000540021 IGLV3-1P01715 115 aa10.94□□□□□ -0.66
MSH6-210ENST00000540021 ADMP35318 185 aa10.94□□□□□ -0.66
MSH6-210ENST00000540021 VAMP3Q15836 100 aa10.94□□□□□ -0.66
MSH6-210ENST00000540021 TGIF2LYQ8IUE0 185 aa10.94□□□□□ -0.66
MSH6-210ENST00000540021 TRIB1Q96RU8 372 aa10.94□□□□□ -0.66
MSH6-210ENST00000540021 PINLYPA6NC86 204 aa10.94□□□□□ -0.66
MSH6-210ENST00000540021 KLRC4-KLRK1H3BQV0 150 aa10.94□□□□□ -0.66
MSH6-210ENST00000540021 SIAH2O43255 324 aa10.94□□□□□ -0.66
MSH6-210ENST00000540021 RNASEKQ6P5S7 137 aaKnown RBP10.94□□□□□ -0.66
MSH6-210ENST00000540021 OR2M7Q8NG81 312 aa10.94□□□□□ -0.66
MSH6-210ENST00000540021 MAFAQ8NHW3 353 aaPredicted RBP10.94□□□□□ -0.66
MSH6-210ENST00000540021 MUC22E2RYF6 1773 aaPredicted RBP10.94□□□□□ -0.66
MSH6-210ENST00000540021 ADAMTS9Q9P2N4 1935 aa10.94□□□□□ -0.66
MSH6-210ENST00000540021 EML6Q6ZMW3 1958 aa10.94□□□□□ -0.66
MSH6-210ENST00000540021 SERF1AO75920 110 aa10.93□□□□□ -0.66
MSH6-210ENST00000540021 PFN1P07737 140 aaKnown RBP10.93□□□□□ -0.66
MSH6-210ENST00000540021 TNFSF10P50591 281 aa10.93□□□□□ -0.66
MSH6-210ENST00000540021 RHOBP62745 196 aa10.93□□□□□ -0.66
MSH6-210ENST00000540021 TIPARPQ7Z3E1 657 aaKnown RBP10.93□□□□□ -0.66
MSH6-210ENST00000540021 C12orf77C9JDV5 145 aa10.93□□□□□ -0.66
MSH6-210ENST00000540021 GGNQ86UU5 652 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms