RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 RPL12P30050 165 aaKnown RBP9.08□□□□□ -0.96
CTCFL-212ENST00000539382 AKR1C2P52895 323 aa9.08□□□□□ -0.96
CTCFL-212ENST00000539382 ID3Q02535 119 aa9.08□□□□□ -0.96
CTCFL-212ENST00000539382 AKR1C1Q04828 323 aa9.08□□□□□ -0.96
CTCFL-212ENST00000539382 WDR25Q64LD2 544 aaPredicted RBP9.08□□□□□ -0.96
CTCFL-212ENST00000539382 UQCC3Q6UW78 93 aa9.08□□□□□ -0.96
CTCFL-212ENST00000539382 REC114Q7Z4M0 266 aa9.08□□□□□ -0.96
CTCFL-212ENST00000539382 DDB2Q92466 427 aa9.08□□□□□ -0.96
CTCFL-212ENST00000539382 CACNG5Q9UF02 275 aa9.08□□□□□ -0.96
CTCFL-212ENST00000539382 C22orf46C9J442 243 aa9.08□□□□□ -0.96
CTCFL-212ENST00000539382 NUPL2O15504 423 aaKnown RBP9.08□□□□□ -0.96
CTCFL-212ENST00000539382 ST8SIA3O43173 380 aa9.08□□□□□ -0.96
CTCFL-212ENST00000539382 P0C879 139 aa9.08□□□□□ -0.96
CTCFL-212ENST00000539382 FAM157CP0CG43 387 aa9.08□□□□□ -0.96
CTCFL-212ENST00000539382 NKX2-1P43699 371 aaPredicted RBP9.08□□□□□ -0.96
CTCFL-212ENST00000539382 ARHGDIBP52566 201 aa9.08□□□□□ -0.96
CTCFL-212ENST00000539382 CATR1Q13166 79 aa9.08□□□□□ -0.96
CTCFL-212ENST00000539382 LSM10Q969L4 123 aaKnown RBP9.08□□□□□ -0.96
CTCFL-212ENST00000539382 RAB9BQ9NP90 201 aa9.08□□□□□ -0.96
CTCFL-212ENST00000539382 FBXL17Q9UF56 701 aa9.08□□□□□ -0.96
CTCFL-212ENST00000539382 KLF2Q9Y5W3 355 aaPredicted RBP9.08□□□□□ -0.96
CTCFL-212ENST00000539382 POMT1Q9Y6A1 747 aa9.08□□□□□ -0.96
CTCFL-212ENST00000539382 SPG11Q96JI7 2443 aa9.08□□□□□ -0.96
CTCFL-212ENST00000539382 ZNF705EA8MWA4 302 aaPredicted RBP9.07□□□□□ -0.96
CTCFL-212ENST00000539382 TAAR5O14804 337 aa9.07□□□□□ -0.96
CTCFL-212ENST00000539382 RAB29O14966 203 aa9.07□□□□□ -0.96
CTCFL-212ENST00000539382 FCGR3BO75015 233 aa9.07□□□□□ -0.96
CTCFL-212ENST00000539382 RAB7AP51149 207 aa9.07□□□□□ -0.96
CTCFL-212ENST00000539382 TMEM33P57088 247 aa9.07□□□□□ -0.96
CTCFL-212ENST00000539382 DIAPH2-AS1Q14236 149 aa9.07□□□□□ -0.96
CTCFL-212ENST00000539382 ZNF525Q8N782 197 aa9.07□□□□□ -0.96
CTCFL-212ENST00000539382 ZNF383Q8NA42 475 aa9.07□□□□□ -0.96
CTCFL-212ENST00000539382 RAB1CQ92928 201 aa9.07□□□□□ -0.96
CTCFL-212ENST00000539382 CELSR2Q9HCU4 2923 aa9.07□□□□□ -0.96
CTCFL-212ENST00000539382 A0A1B0GU03 582 aa9.07□□□□□ -0.96
CTCFL-212ENST00000539382 A1L4Q6 167 aa9.07□□□□□ -0.96
CTCFL-212ENST00000539382 IGHV1-8P0DP01 117 aa9.07□□□□□ -0.96
CTCFL-212ENST00000539382 EFNA4P52798 201 aa9.07□□□□□ -0.96
CTCFL-212ENST00000539382 EIF5AP63241 154 aaKnown RBP9.07□□□□□ -0.96
CTCFL-212ENST00000539382 VKORC1L1Q8N0U8 176 aa9.07□□□□□ -0.96
CTCFL-212ENST00000539382 OR10A7Q8NGE5 316 aa9.07□□□□□ -0.96
CTCFL-212ENST00000539382 RNASE11Q8TAA1 199 aaKnown RBP9.07□□□□□ -0.96
CTCFL-212ENST00000539382 NEIL1Q96FI4 390 aaPredicted RBP9.07□□□□□ -0.96
CTCFL-212ENST00000539382 TIMD4Q96H15 378 aa9.07□□□□□ -0.96
CTCFL-212ENST00000539382 SMIM3Q9BZL3 60 aa9.07□□□□□ -0.96
CTCFL-212ENST00000539382 LPAR3Q9UBY5 353 aa9.07□□□□□ -0.96
CTCFL-212ENST00000539382 MIOXQ9UGB7 285 aa9.07□□□□□ -0.96
CTCFL-212ENST00000539382 GAB2Q9UQC2 676 aa9.07□□□□□ -0.96
CTCFL-212ENST00000539382 TRBV23-1A0A0A0MS06 115 aa9.06□□□□□ -0.96
CTCFL-212ENST00000539382 SSSCA1O60232 199 aa9.06□□□□□ -0.96
CTCFL-212ENST00000539382 CT45A6P0DMU7 189 aa9.06□□□□□ -0.96
CTCFL-212ENST00000539382 CT45A5P0DMU8 189 aa9.06□□□□□ -0.96
CTCFL-212ENST00000539382 CT45A7P0DMV0 189 aa9.06□□□□□ -0.96
CTCFL-212ENST00000539382 PAX9P55771 341 aa9.06□□□□□ -0.96
CTCFL-212ENST00000539382 OR8B3Q8NGG8 313 aa9.06□□□□□ -0.96
CTCFL-212ENST00000539382 FAM216AQ8WUB2 273 aa9.06□□□□□ -0.96
CTCFL-212ENST00000539382 NRGNQ92686 78 aa9.06□□□□□ -0.96
CTCFL-212ENST00000539382 OR8B2Q96RD0 313 aa9.06□□□□□ -0.96
CTCFL-212ENST00000539382 SPIN2AQ99865 258 aa9.06□□□□□ -0.96
CTCFL-212ENST00000539382 SPIN2BQ9BPZ2 258 aa9.06□□□□□ -0.96
CTCFL-212ENST00000539382 PATZ1Q9HBE1 687 aaKnown RBP9.06□□□□□ -0.96
CTCFL-212ENST00000539382 MMP26Q9NRE1 261 aa9.06□□□□□ -0.96
CTCFL-212ENST00000539382 MMP24Q9Y5R2 645 aa9.06□□□□□ -0.96
CTCFL-212ENST00000539382 PPIAL4CA0A0B4J2A2 164 aa9.06□□□□□ -0.96
CTCFL-212ENST00000539382 TMEM218A2RU14 115 aa9.06□□□□□ -0.96
CTCFL-212ENST00000539382 E5RGE8 158 aa9.06□□□□□ -0.96
CTCFL-212ENST00000539382 CHST1O43916 411 aa9.06□□□□□ -0.96
CTCFL-212ENST00000539382 IGHV4-39P01824 125 aa9.06□□□□□ -0.96
CTCFL-212ENST00000539382 PPIAL4GP0DN37 164 aa9.06□□□□□ -0.96
CTCFL-212ENST00000539382 SLC25A6P12236 298 aa9.06□□□□□ -0.96
CTCFL-212ENST00000539382 SRSF3P84103 164 aaKnown RBP9.06□□□□□ -0.96
CTCFL-212ENST00000539382 NHLH2Q02577 135 aa9.06□□□□□ -0.96
CTCFL-212ENST00000539382 TLE4Q04727 773 aa9.06□□□□□ -0.96
CTCFL-212ENST00000539382 TMEM30BQ3MIR4 351 aa9.06□□□□□ -0.96
CTCFL-212ENST00000539382 MIDNQ504T8 468 aa9.06□□□□□ -0.96
CTCFL-212ENST00000539382 SMUG1Q53HV7 270 aa9.06□□□□□ -0.96
CTCFL-212ENST00000539382 CLUHP3Q96NS8 147 aa9.06□□□□□ -0.96
CTCFL-212ENST00000539382 ZFAND3Q9H8U3 227 aa9.06□□□□□ -0.96
CTCFL-212ENST00000539382 NSG2Q9Y328 171 aa9.06□□□□□ -0.96
CTCFL-212ENST00000539382 CSMD1Q96PZ7 3565 aa9.05□□□□□ -0.96
CTCFL-212ENST00000539382 A0A087X0M5 115 aa9.05□□□□□ -0.96
CTCFL-212ENST00000539382 A0A1B0GX30 115 aa9.05□□□□□ -0.96
CTCFL-212ENST00000539382 FAM24AA6NFZ4 105 aa9.05□□□□□ -0.96
CTCFL-212ENST00000539382 MARCH11A6NNE9 402 aa9.05□□□□□ -0.96
CTCFL-212ENST00000539382 J3QR06 171 aa9.05□□□□□ -0.96
CTCFL-212ENST00000539382 MED6O75586 246 aa9.05□□□□□ -0.96
CTCFL-212ENST00000539382 ATG12O94817 140 aa9.05□□□□□ -0.96
CTCFL-212ENST00000539382 ADCYAP1P18509 176 aa9.05□□□□□ -0.96
CTCFL-212ENST00000539382 REG1BP48304 166 aa9.05□□□□□ -0.96
CTCFL-212ENST00000539382 EIF5AL1Q6IS14 154 aaKnown RBP9.05□□□□□ -0.96
CTCFL-212ENST00000539382 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.05□□□□□ -0.96
CTCFL-212ENST00000539382 LY6G5BQ8NDX9 201 aa9.05□□□□□ -0.96
CTCFL-212ENST00000539382 C8orf46Q8TAG6 207 aa9.05□□□□□ -0.96
CTCFL-212ENST00000539382 TSNAXQ99598 290 aaKnown RBP9.05□□□□□ -0.96
CTCFL-212ENST00000539382 NKX6-2Q9C056 277 aaPredicted RBP9.05□□□□□ -0.96
CTCFL-212ENST00000539382 HRH4Q9H3N8 390 aa9.05□□□□□ -0.96
CTCFL-212ENST00000539382 TMEM231Q9H6L2 316 aa9.05□□□□□ -0.96
CTCFL-212ENST00000539382 PLEKHA2Q9HB19 425 aa9.05□□□□□ -0.96
CTCFL-212ENST00000539382 FAM74A7A6NL05 159 aa9.05□□□□□ -0.96
CTCFL-212ENST00000539382 NUDT19A8MXV4 375 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms