RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 KBTBD11O94819 623 aa14.4□□□□□ -0.1
SCARB1-205ENST00000538291 MT-ND6P03923 174 aa14.4□□□□□ -0.1
SCARB1-205ENST00000538291 GPX1P07203 203 aa14.4□□□□□ -0.1
SCARB1-205ENST00000538291 TIAF1O95411 115 aa14.39□□□□□ -0.11
SCARB1-205ENST00000538291 HLA-DQB1P01920 261 aa14.39□□□□□ -0.11
SCARB1-205ENST00000538291 CTSBP07858 339 aa14.39□□□□□ -0.11
SCARB1-205ENST00000538291 MUC1P15941 1255 aaPredicted RBP14.39□□□□□ -0.11
SCARB1-205ENST00000538291 ANOS1P23352 680 aa14.39□□□□□ -0.11
SCARB1-205ENST00000538291 LINC00470Q9BZP3 86 aa14.39□□□□□ -0.11
SCARB1-205ENST00000538291 FAM3BP58499 235 aaPredicted RBP14.39□□□□□ -0.11
SCARB1-205ENST00000538291 TAF15Q92804 592 aaKnown RBP eCLIP14.39□□□□□ -0.112e-6■■■□□ 15
SCARB1-205ENST00000538291 RAB37Q96AX2 223 aa14.39□□□□□ -0.11
SCARB1-205ENST00000538291 CHRNA10Q9GZZ6 450 aa14.39□□□□□ -0.11
SCARB1-205ENST00000538291 LY75O60449 1722 aa14.39□□□□□ -0.11
SCARB1-205ENST00000538291 LMX1BO60663 402 aa14.39□□□□□ -0.11
SCARB1-205ENST00000538291 IGKV3D-11A0A0A0MRZ8 115 aa14.39□□□□□ -0.11
SCARB1-205ENST00000538291 A0A0B4J293 547 aa14.39□□□□□ -0.11
SCARB1-205ENST00000538291 IGKV3-11P04433 115 aa14.39□□□□□ -0.11
SCARB1-205ENST00000538291 VSIG10L2P0DP72 767 aa14.39□□□□□ -0.11
SCARB1-205ENST00000538291 CD99P14209 185 aa14.39□□□□□ -0.11
SCARB1-205ENST00000538291 KCNE5Q9UJ90 142 aa14.39□□□□□ -0.11
SCARB1-205ENST00000538291 C4orf51C9J302 202 aa14.38□□□□□ -0.11
SCARB1-205ENST00000538291 C8orf88P0DMB2 117 aa14.38□□□□□ -0.11
SCARB1-205ENST00000538291 OR51G1Q8NGK1 321 aa14.38□□□□□ -0.11
SCARB1-205ENST00000538291 C17orf51A8MQB3 221 aa14.38□□□□□ -0.11
SCARB1-205ENST00000538291 NMUP48645 174 aa14.38□□□□□ -0.11
SCARB1-205ENST00000538291 C2orf83Q53S99 150 aa14.38□□□□□ -0.11
SCARB1-205ENST00000538291 C10orf128Q5T292 105 aa14.38□□□□□ -0.11
SCARB1-205ENST00000538291 SIGIRRQ6IA17 410 aa14.38□□□□□ -0.11
SCARB1-205ENST00000538291 SLC16A13Q7RTY0 426 aa14.38□□□□□ -0.11
SCARB1-205ENST00000538291 TMEM54Q969K7 222 aa14.38□□□□□ -0.11
SCARB1-205ENST00000538291 OR5AC2Q9NZP5 309 aa14.38□□□□□ -0.11
SCARB1-205ENST00000538291 CYB561D1Q8N8Q1 229 aa14.38□□□□□ -0.11
SCARB1-205ENST00000538291 PRSS53Q2L4Q9 553 aa14.38□□□□□ -0.11
SCARB1-205ENST00000538291 ACSF3Q4G176 576 aaPredicted RBP14.38□□□□□ -0.11
SCARB1-205ENST00000538291 SELENOHQ8IZQ5 122 aaKnown RBP14.38□□□□□ -0.11
SCARB1-205ENST00000538291 NEU4Q8WWR8 484 aaPredicted RBP14.38□□□□□ -0.11
SCARB1-205ENST00000538291 TRBV5-7A0A0A0MS05 114 aa14.37□□□□□ -0.11
SCARB1-205ENST00000538291 C7orf66A4D0T2 115 aa14.37□□□□□ -0.11
SCARB1-205ENST00000538291 CD74P04233 296 aa14.37□□□□□ -0.11
SCARB1-205ENST00000538291 ZNF703Q9H7S9 590 aaPredicted RBP14.37□□□□□ -0.11
SCARB1-205ENST00000538291 TCF19Q9Y242 345 aa14.37□□□□□ -0.11
SCARB1-205ENST00000538291 REG1AP05451 166 aa14.37□□□□□ -0.11
SCARB1-205ENST00000538291 MEF2BQ02080 365 aaPredicted RBP14.37□□□□□ -0.11
SCARB1-205ENST00000538291 LBHQ53QV2 105 aaPredicted RBP14.37□□□□□ -0.11
SCARB1-205ENST00000538291 AQP3Q92482 292 aa14.37□□□□□ -0.11
SCARB1-205ENST00000538291 TMEM45BQ96B21 275 aa14.37□□□□□ -0.11
SCARB1-205ENST00000538291 Q96M66 194 aa14.37□□□□□ -0.11
SCARB1-205ENST00000538291 PPP1R3EQ9H7J1 279 aa14.37□□□□□ -0.11
SCARB1-205ENST00000538291 TMEM106BQ9NUM4 274 aa14.37□□□□□ -0.11
SCARB1-205ENST00000538291 TRIP12Q14669 1992 aaPredicted RBP14.37□□□□□ -0.11
SCARB1-205ENST00000538291 AHCTF1Q8WYP5 2266 aa14.37□□□□□ -0.11
SCARB1-205ENST00000538291 TNFRSF9Q07011 255 aa14.37□□□□□ -0.11
SCARB1-205ENST00000538291 PRSS8Q16651 343 aa14.37□□□□□ -0.11
SCARB1-205ENST00000538291 COX6CP09669 75 aa14.37□□□□□ -0.11
SCARB1-205ENST00000538291 QSER1Q2KHR3 1735 aa14.37□□□□□ -0.11
SCARB1-205ENST00000538291 IGHMP01871 453 aa14.37□□□□□ -0.11
SCARB1-205ENST00000538291 P2RY4P51582 365 aa14.37□□□□□ -0.11
SCARB1-205ENST00000538291 FAM27E3Q08E93 113 aa14.37□□□□□ -0.11
SCARB1-205ENST00000538291 ELOVL1Q9BW60 279 aa14.37□□□□□ -0.11
SCARB1-205ENST00000538291 OR51M1Q9H341 326 aa14.37□□□□□ -0.11
SCARB1-205ENST00000538291 FAM186AA6NE01 2351 aa14.36□□□□□ -0.11
SCARB1-205ENST00000538291 IGKV1D-42A0A075B6H8 117 aa14.36□□□□□ -0.11
SCARB1-205ENST00000538291 NPIPB13A6NJU9 1138 aa14.36□□□□□ -0.11
SCARB1-205ENST00000538291 NPIPB4C9JG80 1138 aa14.36□□□□□ -0.11
SCARB1-205ENST00000538291 OR5P3Q8WZ94 311 aa14.36□□□□□ -0.11
SCARB1-205ENST00000538291 ABHD17AQ96GS6 310 aa14.36□□□□□ -0.11
SCARB1-205ENST00000538291 MEGF10Q96KG7 1140 aa14.36□□□□□ -0.11
SCARB1-205ENST00000538291 TMEM238LA0A1B0GVL6 79 aa14.36□□□□□ -0.11
SCARB1-205ENST00000538291 A6NJY4 79 aa14.36□□□□□ -0.11
SCARB1-205ENST00000538291 GDF9O60383 454 aa14.36□□□□□ -0.11
SCARB1-205ENST00000538291 VN1R17PQ8TDU5 208 aa14.36□□□□□ -0.11
SCARB1-205ENST00000538291 TUBA4BQ9H853 241 aa14.36□□□□□ -0.11
SCARB1-205ENST00000538291 DIRC3C9JPN6 131 aa14.36□□□□□ -0.11
SCARB1-205ENST00000538291 GCGP01275 180 aa14.36□□□□□ -0.11
SCARB1-205ENST00000538291 NUTF2P61970 127 aaKnown RBP14.36□□□□□ -0.11
SCARB1-205ENST00000538291 SIGLEC12Q96PQ1 595 aa14.36□□□□□ -0.11
SCARB1-205ENST00000538291 ZNF318Q5VUA4 2279 aa14.35□□□□□ -0.11
SCARB1-205ENST00000538291 LOC390937A0A1W2PQ73 354 aa14.35□□□□□ -0.11
SCARB1-205ENST00000538291 ZG16O60844 167 aa14.35□□□□□ -0.11
SCARB1-205ENST00000538291 NUDT3O95989 172 aa14.35□□□□□ -0.11
SCARB1-205ENST00000538291 TRGV3P03979 118 aa14.35□□□□□ -0.11
SCARB1-205ENST00000538291 ZNF146Q15072 292 aa14.35□□□□□ -0.11
SCARB1-205ENST00000538291 G6PC2Q9NQR9 355 aa14.35□□□□□ -0.11
SCARB1-205ENST00000538291 CD81P60033 236 aa14.35□□□□□ -0.11
SCARB1-205ENST00000538291 UBE2V2Q15819 145 aa14.35□□□□□ -0.11
SCARB1-205ENST00000538291 TMEM177Q53S58 311 aa14.35□□□□□ -0.11
SCARB1-205ENST00000538291 C19orf24Q9BVV8 132 aa14.35□□□□□ -0.11
SCARB1-205ENST00000538291 MAP1LC3AQ9H492 121 aa14.35□□□□□ -0.11
SCARB1-205ENST00000538291 ATP5IP56385 69 aaPredicted RBP14.35□□□□□ -0.11
SCARB1-205ENST00000538291 TP53RKQ96S44 253 aa14.35□□□□□ -0.11
SCARB1-205ENST00000538291 TRGC1P0CF51 173 aa14.35□□□□□ -0.11
SCARB1-205ENST00000538291 TNFSF10P50591 281 aa14.35□□□□□ -0.11
SCARB1-205ENST00000538291 UNQ9370/PRO34162Q6UXP9 181 aa14.35□□□□□ -0.11
SCARB1-205ENST00000538291 FAM57AQ8TBR7 257 aa14.35□□□□□ -0.11
SCARB1-205ENST00000538291 ZNF256Q9Y2P7 627 aaPredicted RBP14.35□□□□□ -0.11
SCARB1-205ENST00000538291 SSBP3Q9BWW4 388 aaPredicted RBP14.34□□□□□ -0.11
SCARB1-205ENST00000538291 COL25A1Q9BXS0 654 aaPredicted RBP14.34□□□□□ -0.11
SCARB1-205ENST00000538291 A0A087X0M5 115 aa14.34□□□□□ -0.11
SCARB1-205ENST00000538291 A0A1B0GX30 115 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms