RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 NANPQ8TBE9 248 aa7.25□□□□□ -1.25
UBE3B-208ENST00000538070 TAF15Q92804 592 aaKnown RBP eCLIP7.25□□□□□ -1.25
UBE3B-208ENST00000538070 MBNL3Q9NUK0 354 aaKnown RBP7.25□□□□□ -1.25
UBE3B-208ENST00000538070 KMT2EQ8IZD2 1858 aa7.25□□□□□ -1.25
UBE3B-208ENST00000538070 TGIF2-C20orf24A0A0A6YYL0 155 aa7.25□□□□□ -1.25
UBE3B-208ENST00000538070 TRAV38-1A0A0B4J264 116 aa7.25□□□□□ -1.25
UBE3B-208ENST00000538070 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.25□□□□□ -1.25
UBE3B-208ENST00000538070 ZNF737O75373 536 aa7.25□□□□□ -1.25
UBE3B-208ENST00000538070 HBE1P02100 147 aa7.25□□□□□ -1.25
UBE3B-208ENST00000538070 OR9G9P0C7N8 305 aa7.25□□□□□ -1.25
UBE3B-208ENST00000538070 IRF2P14316 349 aa7.25□□□□□ -1.25
UBE3B-208ENST00000538070 HABP2Q14520 560 aaPredicted RBP7.25□□□□□ -1.25
UBE3B-208ENST00000538070 GFRALQ6UXV0 394 aa7.25□□□□□ -1.25
UBE3B-208ENST00000538070 COMMD1Q8N668 190 aa7.25□□□□□ -1.25
UBE3B-208ENST00000538070 PPP1R35Q8TAP8 253 aa7.25□□□□□ -1.25
UBE3B-208ENST00000538070 IL22RA2Q969J5 263 aa7.25□□□□□ -1.25
UBE3B-208ENST00000538070 MEGF10Q96KG7 1140 aa7.25□□□□□ -1.25
UBE3B-208ENST00000538070 S1PR3Q99500 378 aa7.25□□□□□ -1.25
UBE3B-208ENST00000538070 KIAA1456Q9P272 454 aa7.25□□□□□ -1.25
UBE3B-208ENST00000538070 MALRD1Q5VYJ5 2156 aa7.25□□□□□ -1.25
UBE3B-208ENST00000538070 TRBV6-6A0A0A6YYG2 114 aa7.25□□□□□ -1.25
UBE3B-208ENST00000538070 S100A9P06702 114 aaKnown RBP7.25□□□□□ -1.25
UBE3B-208ENST00000538070 COX5AP20674 150 aa7.25□□□□□ -1.25
UBE3B-208ENST00000538070 OR10G4Q8NGN3 311 aa7.25□□□□□ -1.25
UBE3B-208ENST00000538070 OR10G9Q8NGN4 311 aa7.25□□□□□ -1.25
UBE3B-208ENST00000538070 OR10G7Q8NGN6 311 aa7.25□□□□□ -1.25
UBE3B-208ENST00000538070 C11orf1Q9H5F2 150 aa7.25□□□□□ -1.25
UBE3B-208ENST00000538070 TP53TG5Q9Y2B4 290 aa7.25□□□□□ -1.25
UBE3B-208ENST00000538070 COL27A1Q8IZC6 1860 aaPredicted RBP7.25□□□□□ -1.25
UBE3B-208ENST00000538070 MKRN2OSH3BPM6 223 aa7.24□□□□□ -1.25
UBE3B-208ENST00000538070 IGHV3-48P01763 117 aa7.24□□□□□ -1.25
UBE3B-208ENST00000538070 APELAP0DMC3 54 aa7.24□□□□□ -1.25
UBE3B-208ENST00000538070 ZNF134P52741 427 aa7.24□□□□□ -1.25
UBE3B-208ENST00000538070 RPS23P62266 143 aaKnown RBP7.24□□□□□ -1.25
UBE3B-208ENST00000538070 RHEBQ15382 184 aa7.24□□□□□ -1.25
UBE3B-208ENST00000538070 ZNF726P1Q15940 193 aa7.24□□□□□ -1.25
UBE3B-208ENST00000538070 C1orf185Q5T7R7 199 aa7.24□□□□□ -1.25
UBE3B-208ENST00000538070 CLDND2Q8NHS1 167 aa7.24□□□□□ -1.25
UBE3B-208ENST00000538070 LSM10Q969L4 123 aaKnown RBP7.24□□□□□ -1.25
UBE3B-208ENST00000538070 SMIM7Q9BQ49 75 aa7.24□□□□□ -1.25
UBE3B-208ENST00000538070 PRRG2O14669 202 aa7.24□□□□□ -1.25
UBE3B-208ENST00000538070 ACTL6BO94805 426 aa7.24□□□□□ -1.25
UBE3B-208ENST00000538070 YIF1AO95070 293 aa7.24□□□□□ -1.25
UBE3B-208ENST00000538070 MT-ND4LP03901 98 aa7.24□□□□□ -1.25
UBE3B-208ENST00000538070 SLC25A6P12236 298 aa7.24□□□□□ -1.25
UBE3B-208ENST00000538070 DLX1P56177 255 aa7.24□□□□□ -1.25
UBE3B-208ENST00000538070 SRSF7Q16629 238 aaKnown RBP eCLIP7.24□□□□□ -1.25
UBE3B-208ENST00000538070 WDR25Q64LD2 544 aaPredicted RBP7.24□□□□□ -1.25
UBE3B-208ENST00000538070 ACSM6Q6P461 480 aa7.24□□□□□ -1.25
UBE3B-208ENST00000538070 TVP23CQ96ET8 276 aa7.24□□□□□ -1.25
UBE3B-208ENST00000538070 WDR61Q9GZS3 305 aaKnown RBP7.24□□□□□ -1.25
UBE3B-208ENST00000538070 IGKV1D-33P01593 117 aa7.24□□□□□ -1.25
UBE3B-208ENST00000538070 IGKV1-33P01594 117 aa7.24□□□□□ -1.25
UBE3B-208ENST00000538070 OR8U8P0C7N1 319 aa7.24□□□□□ -1.25
UBE3B-208ENST00000538070 TCF15Q12870 199 aa7.24□□□□□ -1.25
UBE3B-208ENST00000538070 LINC00518Q8N0U6 118 aa7.24□□□□□ -1.25
UBE3B-208ENST00000538070 RPP25LQ8N5L8 163 aaKnown RBP7.24□□□□□ -1.25
UBE3B-208ENST00000538070 RBMXL3Q8N7X1 1067 aaKnown RBP7.24□□□□□ -1.25
UBE3B-208ENST00000538070 C15orf54Q8N8G6 183 aa7.24□□□□□ -1.25
UBE3B-208ENST00000538070 CALYQ9NYX4 217 aa7.24□□□□□ -1.25
UBE3B-208ENST00000538070 A0A1W2PPV4 95 aa7.23□□□□□ -1.25
UBE3B-208ENST00000538070 PAGE4O60829 102 aa7.23□□□□□ -1.25
UBE3B-208ENST00000538070 BRWD1-AS2P59051 145 aa7.23□□□□□ -1.25
UBE3B-208ENST00000538070 PDLIM3Q53GG5 364 aaPredicted RBP7.23□□□□□ -1.25
UBE3B-208ENST00000538070 SCRT1Q9BWW7 348 aa7.23□□□□□ -1.25
UBE3B-208ENST00000538070 UNKLQ9H9P5 680 aaKnown RBP7.23□□□□□ -1.25
UBE3B-208ENST00000538070 ZNF98A6NK75 572 aa7.23□□□□□ -1.25
UBE3B-208ENST00000538070 FAM87AP0C7U9 286 aa7.23□□□□□ -1.25
UBE3B-208ENST00000538070 RTP5Q14D33 572 aa7.23□□□□□ -1.25
UBE3B-208ENST00000538070 LRRC75BQ2VPJ9 315 aa7.23□□□□□ -1.25
UBE3B-208ENST00000538070 FAM90A1Q86YD7 464 aa7.23□□□□□ -1.25
UBE3B-208ENST00000538070 EDARADDQ8WWZ3 215 aa7.23□□□□□ -1.25
UBE3B-208ENST00000538070 ENY2Q9NPA8 101 aa7.23□□□□□ -1.25
UBE3B-208ENST00000538070 ZMAT5Q9UDW3 170 aaKnown RBP7.23□□□□□ -1.25
UBE3B-208ENST00000538070 HCFC1P51610 2035 aa7.23□□□□□ -1.25
UBE3B-208ENST00000538070 MGST3O14880 152 aa7.23□□□□□ -1.25
UBE3B-208ENST00000538070 MMP23AO75900 390 aa7.23□□□□□ -1.25
UBE3B-208ENST00000538070 BCL2P10415 239 aa7.23□□□□□ -1.25
UBE3B-208ENST00000538070 KITLGP21583 273 aa7.23□□□□□ -1.25
UBE3B-208ENST00000538070 MORN2Q502X0 79 aa7.23□□□□□ -1.25
UBE3B-208ENST00000538070 LYPD6BQ8NI32 183 aa7.23□□□□□ -1.25
UBE3B-208ENST00000538070 SSX3Q99909 188 aa7.23□□□□□ -1.25
UBE3B-208ENST00000538070 RYDENQ9NUL5 291 aaKnown RBP7.23□□□□□ -1.25
UBE3B-208ENST00000538070 DSCAMO60469 2012 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 TRGV10A0A0A0MS01 117 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 RRHO14718 337 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 CGAP01215 116 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 CXCL1P09341 107 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 GZMHP20718 246 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 TNFSF4P23510 183 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 MRPS11P82912 194 aaKnown RBP7.22□□□□□ -1.25
UBE3B-208ENST00000538070 ZNF561Q8N587 486 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 NEUROG1Q92886 237 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 RHOVQ96L33 236 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 RNF7Q9UBF6 113 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 GAB2Q9UQC2 676 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 TRGV8A0A0C4DH27 118 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 SRRM5B3KS81 715 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 J3QW42 95 aa7.22□□□□□ -1.25
UBE3B-208ENST00000538070 CCL3L1P16619 93 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms