RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 P0DMU3 169 aa2.38□□□□□ -2.03
PRKDC-208ENST00000536710 FAM231AP0DMU4 169 aa2.38□□□□□ -2.03
PRKDC-208ENST00000536710 FAM231CP0DMU5 169 aa2.38□□□□□ -2.03
PRKDC-208ENST00000536710 MYL12AP19105 171 aa2.38□□□□□ -2.03
PRKDC-208ENST00000536710 RPL27AP46776 148 aaKnown RBP2.38□□□□□ -2.03
PRKDC-208ENST00000536710 TCL1AP56279 114 aa2.38□□□□□ -2.03
PRKDC-208ENST00000536710 BATFQ16520 125 aa2.38□□□□□ -2.03
PRKDC-208ENST00000536710 GID4Q8IVV7 300 aa2.38□□□□□ -2.03
PRKDC-208ENST00000536710 C10orf67Q8IYJ2 551 aa2.38□□□□□ -2.03
PRKDC-208ENST00000536710 SLC35F6Q8N357 371 aa2.38□□□□□ -2.03
PRKDC-208ENST00000536710 MNS1Q8NEH6 495 aa2.38□□□□□ -2.03
PRKDC-208ENST00000536710 RNASE6Q93091 150 aaKnown RBP2.38□□□□□ -2.03
PRKDC-208ENST00000536710 MRPS24Q96EL2 167 aaKnown RBP2.38□□□□□ -2.03
PRKDC-208ENST00000536710 TMA16Q96EY4 203 aaKnown RBP2.38□□□□□ -2.03
PRKDC-208ENST00000536710 DNAJC30Q96LL9 226 aa2.38□□□□□ -2.03
PRKDC-208ENST00000536710 OR51I2Q9H344 312 aa2.38□□□□□ -2.03
PRKDC-208ENST00000536710 CXorf21Q9HAI6 301 aa2.38□□□□□ -2.03
PRKDC-208ENST00000536710 V9GYY5 206 aaPredicted RBP2.38□□□□□ -2.03
PRKDC-208ENST00000536710 ZNF407Q9C0G0 2248 aa2.38□□□□□ -2.03
PRKDC-208ENST00000536710 KIF15Q9NS87 1388 aa2.37□□□□□ -2.03
PRKDC-208ENST00000536710 IGHV3-15A0A0B4J1V0 119 aa2.37□□□□□ -2.03
PRKDC-208ENST00000536710 A0A1W2PQD3 144 aa2.37□□□□□ -2.03
PRKDC-208ENST00000536710 EVPLLA8MZ36 301 aa2.37□□□□□ -2.03
PRKDC-208ENST00000536710 ACOX3O15254 700 aa2.37□□□□□ -2.03
PRKDC-208ENST00000536710 TGOLN2O43493 480 aa2.37□□□□□ -2.03
PRKDC-208ENST00000536710 GNRH2O43555 120 aa2.37□□□□□ -2.03
PRKDC-208ENST00000536710 APOMO95445 188 aa2.37□□□□□ -2.03
PRKDC-208ENST00000536710 CALB1P05937 261 aa2.37□□□□□ -2.03
PRKDC-208ENST00000536710 CCR7P32248 378 aa2.37□□□□□ -2.03
PRKDC-208ENST00000536710 XCL1P47992 114 aa2.37□□□□□ -2.03
PRKDC-208ENST00000536710 ZNF140P52738 457 aaPredicted RBP2.37□□□□□ -2.03
PRKDC-208ENST00000536710 C1orf194Q5T5A4 169 aa2.37□□□□□ -2.03
PRKDC-208ENST00000536710 LPCAT4Q643R3 524 aa2.37□□□□□ -2.03
PRKDC-208ENST00000536710 CD200R1LQ6Q8B3 271 aa2.37□□□□□ -2.03
PRKDC-208ENST00000536710 AGTRAPQ6RW13 159 aa2.37□□□□□ -2.03
PRKDC-208ENST00000536710 PTH2Q96A98 100 aa2.37□□□□□ -2.03
PRKDC-208ENST00000536710 GNPNAT1Q96EK6 184 aaPredicted RBP2.37□□□□□ -2.03
PRKDC-208ENST00000536710 DIRAS2Q96HU8 199 aa2.37□□□□□ -2.03
PRKDC-208ENST00000536710 CCL13Q99616 98 aa2.37□□□□□ -2.03
PRKDC-208ENST00000536710 SPZ1Q9BXG8 430 aa2.37□□□□□ -2.03
PRKDC-208ENST00000536710 TMEM222Q9H0R3 208 aa2.37□□□□□ -2.03
PRKDC-208ENST00000536710 TAAR3PQ9P1P4 343 aa2.37□□□□□ -2.03
PRKDC-208ENST00000536710 ATAD5Q96QE3 1844 aa2.37□□□□□ -2.03
PRKDC-208ENST00000536710 C9orf84Q5VXU9 1444 aa2.36□□□□□ -2.03
PRKDC-208ENST00000536710 MUC21A0A0G2JKD1 596 aa2.36□□□□□ -2.03
PRKDC-208ENST00000536710 MUC21A0A140T8X8 626 aa2.36□□□□□ -2.03
PRKDC-208ENST00000536710 COX7A2LO14548 114 aa2.36□□□□□ -2.03
PRKDC-208ENST00000536710 MAP2K4P45985 399 aa2.36□□□□□ -2.03
PRKDC-208ENST00000536710 SLCO1A2P46721 670 aa2.36□□□□□ -2.03
PRKDC-208ENST00000536710 KRTAP12-3P60328 96 aa2.36□□□□□ -2.03
PRKDC-208ENST00000536710 PRDX4Q13162 271 aa2.36□□□□□ -2.03
PRKDC-208ENST00000536710 ITGB3BPQ13352 177 aaPredicted RBP2.36□□□□□ -2.03
PRKDC-208ENST00000536710 KRTAP6-3Q3LI67 103 aa2.36□□□□□ -2.03
PRKDC-208ENST00000536710 C5orf46Q6UWT4 87 aa2.36□□□□□ -2.03
PRKDC-208ENST00000536710 GPHB5Q86YW7 130 aa2.36□□□□□ -2.03
PRKDC-208ENST00000536710 OR4X2Q8NGF9 303 aa2.36□□□□□ -2.03
PRKDC-208ENST00000536710 NDUFB11Q9NX14 153 aa2.36□□□□□ -2.03
PRKDC-208ENST00000536710 ANAPC10Q9UM13 185 aa2.36□□□□□ -2.03
PRKDC-208ENST00000536710 PXMP4Q9Y6I8 212 aa2.36□□□□□ -2.03
PRKDC-208ENST00000536710 LCTP09848 1927 aa2.36□□□□□ -2.03
PRKDC-208ENST00000536710 THSD7AQ9UPZ6 1657 aa2.35□□□□□ -2.03
PRKDC-208ENST00000536710 CECR2Q9BXF3 1484 aa2.35□□□□□ -2.03
PRKDC-208ENST00000536710 A0A087WUU8 490 aa2.35□□□□□ -2.03
PRKDC-208ENST00000536710 C2orf74A8MZ97 194 aa2.35□□□□□ -2.03
PRKDC-208ENST00000536710 DISC1C4P0D8 188 aa2.35□□□□□ -2.03
PRKDC-208ENST00000536710 C9JCJ5 164 aa2.35□□□□□ -2.03
PRKDC-208ENST00000536710 IFNA5P01569 189 aa2.35□□□□□ -2.03
PRKDC-208ENST00000536710 TNNC2P02585 160 aa2.35□□□□□ -2.03
PRKDC-208ENST00000536710 UCHL3P15374 230 aa2.35□□□□□ -2.03
PRKDC-208ENST00000536710 RBM11P57052 281 aaKnown RBP2.35□□□□□ -2.03
PRKDC-208ENST00000536710 HES1Q14469 280 aa2.35□□□□□ -2.03
PRKDC-208ENST00000536710 SS18Q15532 418 aa2.35□□□□□ -2.03
PRKDC-208ENST00000536710 Q6ZS52 159 aa2.35□□□□□ -2.03
PRKDC-208ENST00000536710 UMODL1-AS1Q8N2C9 162 aa2.35□□□□□ -2.03
PRKDC-208ENST00000536710 CLDND2Q8NHS1 167 aa2.35□□□□□ -2.03
PRKDC-208ENST00000536710 TXNDC17Q9BRA2 123 aa2.35□□□□□ -2.03
PRKDC-208ENST00000536710 TTTY13Q9BZ97 58 aa2.35□□□□□ -2.03
PRKDC-208ENST00000536710 TTTY12Q9BZ98 90 aa2.35□□□□□ -2.03
PRKDC-208ENST00000536710 OR51I1Q9H343 314 aa2.35□□□□□ -2.03
PRKDC-208ENST00000536710 FAM96AQ9H5X1 160 aa2.35□□□□□ -2.03
PRKDC-208ENST00000536710 ADCY9O60503 1353 aa2.35□□□□□ -2.03
PRKDC-208ENST00000536710 SMIM23A6NLE4 172 aa2.34□□□□□ -2.03
PRKDC-208ENST00000536710 LY6LH3BQJ8 138 aa2.34□□□□□ -2.03
PRKDC-208ENST00000536710 DCTN3O75935 186 aa2.34□□□□□ -2.03
PRKDC-208ENST00000536710 NPYP01303 97 aa2.34□□□□□ -2.03
PRKDC-208ENST00000536710 BPGMP07738 259 aa2.34□□□□□ -2.03
PRKDC-208ENST00000536710 ZNF728P0DKX0 622 aa2.34□□□□□ -2.03
PRKDC-208ENST00000536710 TAS2R20P59543 309 aa2.34□□□□□ -2.03
PRKDC-208ENST00000536710 NAA20P61599 178 aa2.34□□□□□ -2.03
PRKDC-208ENST00000536710 UBE2IP63279 158 aaKnown RBP2.34□□□□□ -2.03
PRKDC-208ENST00000536710 LGALS9BQ3B8N2 356 aa2.34□□□□□ -2.03
PRKDC-208ENST00000536710 CCDC122Q5T0U0 273 aa2.34□□□□□ -2.03
PRKDC-208ENST00000536710 LHFPL1Q86WI0 220 aa2.34□□□□□ -2.03
PRKDC-208ENST00000536710 OR51D1Q8NGF3 324 aa2.34□□□□□ -2.03
PRKDC-208ENST00000536710 ZNF471Q9BX82 626 aaPredicted RBP2.34□□□□□ -2.03
PRKDC-208ENST00000536710 XPNPEP1Q9NQW7 623 aa2.34□□□□□ -2.03
PRKDC-208ENST00000536710 GUCA1BQ9UMX6 200 aa2.34□□□□□ -2.03
PRKDC-208ENST00000536710 KLK5Q9Y337 293 aaPredicted RBP2.34□□□□□ -2.03
PRKDC-208ENST00000536710 COQ4Q9Y3A0 265 aa2.34□□□□□ -2.03
PRKDC-208ENST00000536710 LSM5Q9Y4Y9 91 aaKnown RBP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms